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Report for CCDS28654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28654.1 Public Mus musculus 17 Fkbpl 23 108 98 CCDS HistoryNCBI Gene:56299Re-query CCDS DB by CCDS ID:28654.1Re-query CCDS DB by GeneID:56299See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28654.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000036720.8 ENSMUSP00000037273.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000036720.8Link to Ensembl Protein Viewer:ENSMUSP00000037273.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000036720Re-query CCDS DB by Protein ID:ENSMUSP00000037273
Original member Current member NCBI NM_019873.3 NP_063926.1 Accepted alive Link to Nucleotide Sequence:NM_019873.3Link to Protein Sequence:NP_063926.1Re-query CCDS DB by Nucleotide ID:NM_019873Re-query CCDS DB by Protein ID:NP_063926Link to BLAST:NP_063926.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_063926.1 347 O35450 347 100% 0 0

Chromosomal Locations for CCDS 28654.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 34645260 34646303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1044 nt):
ATGGAGACCTCACCTATCAGCCCAATGAACGAGAAGAACACCGCTCAGCCGCAGCAGCGGGAAGAGAACG
CCCAGCAAATCTTAAATACAGCCATTCCGTTTAGGCAGCGGTCCCCAGGTCTTCTCCCTGAAGCCCTGAA
GGTGGGAGTGAGACCGGATCCAGCCAATCAAATTGTAGAGACTCAAGAGATTGAACATCCCGTGGCTGGA
TTTGAAGGTGACTCTGATCAATTTCAAGTCTCAACCAATGAGATGGCAGAGCACCTCCAAGCTTCTGATC
TTTGGTACTGTCCTGATGGGAGTTTTGTAAAGAAGATCATAGTCCCTGGCCATGGCTTAGACAAACCCAA
GCTAGGCTCCAAATGCCAAGTGTTGGCTTTGGGATTTCCTTTTGGATCTGGGATGCCAGAGGGCTGGACA
GAACTAACCATAGGCATAGGACAATGGAGGGAAAAAATGTGGGGGGAACTCATGGAAAAATGCCTGGAGT
CTATGCGTCAAGGTGAGGAGGCAAAGATTCACCTTCCTGGATCCTCTGCACCTCTTGCTAAACTCAGACT
GGATTCCTTCACCAATGGCCGGGACTCCTGGGAGATGGAGGCTATGGAGAAGGAGGCTCTGGCCAAAGAA
GAACACAGAAGGGGTACAGAACTGTTTCGAGCTGGGAACCCTCAAGGGGCTGCCCGATGCTATGGACGGG
CTCTCCGACTGCTGCTGACGTTGCCCCCACCCGGCCCTCCCGAACGAACTACCCTTTATGCCAATCTGGC
TGCCTGCCAGTTGCTGCTAGGACACCCCCAGTTGGCAGCCCAGAGCTGTGACCGAGTGCTGGAGCGGGAG
CCGGGCCATTTAAAGGCCTTATACCGAAGGGGGGTTGCTCGGGCTGCCCTCGGGGACTTGGAAAAAGCCA
CTGCTGATTTCAAGAAAGTGCTAGCAGTAGATCCCAAAAACCGTGCAGCGAAAGAGGAGCTGGGGAAGGT
GGTCATTCAGGGAAGGAAACAGGATGCAGGGCTGGCTCGGGGACTGCGCAAGATGTTTAGCTGA

Translation (347 aa):
METSPISPMNEKNTAQPQQREENAQQILNTAIPFRQRSPGLLPEALKVGVRPDPANQIVETQEIEHPVAG
FEGDSDQFQVSTNEMAEHLQASDLWYCPDGSFVKKIIVPGHGLDKPKLGSKCQVLALGFPFGSGMPEGWT
ELTIGIGQWREKMWGELMEKCLESMRQGEEAKIHLPGSSAPLAKLRLDSFTNGRDSWEMEAMEKEALAKE
EHRRGTELFRAGNPQGAARCYGRALRLLLTLPPPGPPERTTLYANLAACQLLLGHPQLAAQSCDRVLERE
PGHLKALYRRGVARAALGDLEKATADFKKVLAVDPKNRAAKEELGKVVIQGRKQDAGLARGLRKMFS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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