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Report for CCDS28418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28418.1 Public Mus musculus 17 Fpr1 23 108 98 CCDS HistoryNCBI Gene:14293Re-query CCDS DB by CCDS ID:28418.1Re-query CCDS DB by GeneID:14293See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28418.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061516.7 ENSMUSP00000052894.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061516.7Link to Ensembl Protein Viewer:ENSMUSP00000052894.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000061516Re-query CCDS DB by Protein ID:ENSMUSP00000052894
Original member Current member NCBI NM_013521.2 NP_038549.1 Accepted alive Link to Nucleotide Sequence:NM_013521.2Link to Protein Sequence:NP_038549.1Re-query CCDS DB by Nucleotide ID:NM_013521Re-query CCDS DB by Protein ID:NP_038549Link to BLAST:NP_038549.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038549.1 364 P33766 364 100% 0 0

Chromosomal Locations for CCDS 28418.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 17876631 17877725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1095 nt):
ATGGACACCAACATGTCTCTCCTCATGAACAAGTCTGCAGTGAACCTCATGAATGTATCTGGGAGTACTC
AATCAGTATCTGCTGGCTACATCGTTCTGGATGTCTTCTCATATTTGATCTTTGCCGTCACATTTGTCCT
TGGGGTTCTGGGCAACGGGCTCGTGATCTGGGTGGCTGGTTTCCGCATGAAACACACTGTCACCACCATC
TCTTACTTGAACTTGGCCATTGCTGACTTTTGCTTCACTTCCACTTTGCCATTTTACATTGCCAGCATGG
TCATGGGAGGACATTGGCCATTTGGTTGGTTCATGTGCAAATTCATATATACTGTAATAGACATAAACCT
ATTTGGAAGTGTCTTCCTGATTGCCCTCATTGCACTGGACCGCTGTATTTGTGTTCTGCATCCAGTCTGG
GCTCAGAACCACCGCACTGTGAGCCTAGCCAAGAAGGTAATCATCGTACCCTGGATTTGTGCATTTCTTC
TTACATTGCCAGTTATCATTCGTTTGACCACAGTCCCTAATAGTAGACTTGGACCAGGGAAAACAGCCTG
TACTTTCGACTTCTCCCCCTGGACCAAAGATCCTGTAGAGAAGAGGAAGGTGGCCGTCACCATGCTCACT
GTCAGAGGAATCATCAGGTTCATCATTGGGTTCAGCACTCCCATGTCCATTGTTGCCATTTGCTATGGGT
TAATAACCACTAAAATTCACAGGCAGGGCCTGATCAAATCCAGCCGTCCTTTGCGGGTTCTCTCCTTTGT
TGTGGCTGCCTTTTTCCTCTGCTGGTGCCCATTTCAAGTAGTGGCCCTCATATCCACAATCCAAGTCCGT
GAACGGTTGAAGAACATGACTCCAGGCATTGTAACTGCTTTGAAAATCACAAGCCCCTTGGCTTTCTTCA
ACAGCTGCCTCAATCCAATGCTTTATGTCTTTATGGGCCAGGACTTCAGAGAAAGACTAATCCACTCTTT
ACCTGCCAGCCTAGAGAGGGCCCTGACTGAGGACTCAGCTCAGACCAGTGATACAGGCACCAATTTGGGG
ACCAACTCTACTTCCCTTTCTGAAAACACTTTAAATGCAATGTAA

Translation (364 aa):
MDTNMSLLMNKSAVNLMNVSGSTQSVSAGYIVLDVFSYLIFAVTFVLGVLGNGLVIWVAGFRMKHTVTTI
SYLNLAIADFCFTSTLPFYIASMVMGGHWPFGWFMCKFIYTVIDINLFGSVFLIALIALDRCICVLHPVW
AQNHRTVSLAKKVIIVPWICAFLLTLPVIIRLTTVPNSRLGPGKTACTFDFSPWTKDPVEKRKVAVTMLT
VRGIIRFIIGFSTPMSIVAICYGLITTKIHRQGLIKSSRPLRVLSFVVAAFFLCWCPFQVVALISTIQVR
ERLKNMTPGIVTALKITSPLAFFNSCLNPMLYVFMGQDFRERLIHSLPASLERALTEDSAQTSDTGTNLG
TNSTSLSENTLNAM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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