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Report for CCDS27864.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27864.1 Public Mus musculus 15 Krt73 23 108 98 CCDS HistoryNCBI Gene:223915Re-query CCDS DB by CCDS ID:27864.1Re-query CCDS DB by GeneID:223915See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27864.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063292.7 ENSMUSP00000065349.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063292.7Link to Ensembl Protein Viewer:ENSMUSP00000065349.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000063292Re-query CCDS DB by Protein ID:ENSMUSP00000065349
Original member Current member NCBI NM_212485.3 NP_997650.1 Accepted alive Link to Nucleotide Sequence:NM_212485.3Link to Protein Sequence:NP_997650.1Re-query CCDS DB by Nucleotide ID:NM_212485Re-query CCDS DB by Protein ID:NP_997650Link to BLAST:NP_997650.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997650.1 539 Q6NXH9 539 100% 0 0

Chromosomal Locations for CCDS 27864.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101793807 101794063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101794811 101794845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101795776 101795996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101796343 101796468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101798771 101798935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101799320 101799415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101799901 101799961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101800712 101800926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101801854 101802297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1620 nt):
ATGAATCGCCAATTCACCTGCAAACCTGGAGTTGCCAACAGGGGCTTCAGCGGCTGCTCAGCTGTGCTCT
CCGGAGGCAGCTCATCCTCTTACCGGGCAGCCGGCAAAGGGCTCAGTGGAGGCTTCAGCAGTCGGAGCCT
CTACAGCCTGAGGAGTCCCAGGAGCATCTCCTTCAATGTGGCTAGCAGCAGCGGGCGCACAGGGGGATAT
GGGTTTGGCCGGAATCGGGCCAGTGGCTTTGCTGGCAGTATGTTTGGCAGTGGGGCTCTGGGGCCTTCAA
ATCCATCCTTGTGCCTGCCTGGAGGCATCCACCAGGTAACAGTCAATAAAAGCCTCCTGGCTCCTCTCAA
TGTGGAGCTGGACCCGGAGATCCAGAAGGTGCGCGCCCAGGAGCGGGAGCAGATCAAGGCTCTGAACAAC
AAATTCGCCTCCTTCATCGACAAGGTGCGCTTCTTGGAGCAGCAGAACCAGGTGCTGCAGACCAAGTGGG
AGCTGCTGCAGCAGCTGGACCTGAGCAACTGCAGGAGGAACCTGGAGCCTGTTTATGAGGCCCACATCAG
CAGCCTGCAAAAGCAGCTGGATTCGCTATCTGGGGACAGGGTGAGGCTGGACTCGGAGCTGAGGGGCATG
CGGGATGCAGTGGAGGACTGCAAGAAGAGGTATGAAGAAGAAATAAACAAGCGTACAACTGCTGAGAATG
AATTTGTAGTGCTTAAGAAGGATGTGGATGCCGCATACATGAGCAAGGTGGAGCTTCAGGCCAAGGTGGA
CGCCCTGGATGGAGAGATCAAATTCCTCAAGTGTCTGTATGAGGGGGAGATTACTCAGATGCAGTCCCAC
ATAAGTGACACCTCTGTGGTCCTGTCCATGGACAACAACCGCAACCTGGACCTGGACAGCATCATCGCTG
AGGTCCGAGCTCAGTACGAGGACATTGCCCTGAAGAGCAAGGCAGAGGCTGAGATGGTGTACCAGACCAA
GTTCCAAGAGCTGCAGCTGGCAGCTGGCCGGCACGGAGATGACCTCAAGCACACCAGGAATGAGATCTCT
GAGTTGACCCGGCTCATCCAGAGACTGCGATCAGAAATCGAGAGTGTGAAGAAGCAATGTTCCAATCTAG
AGACAGCCATTGCTGATGCTGAGCAGCGAGGTGACTGTGCCCTCAAGGATGCCCGGGCCAAGCTGGATGA
GCTGGAGAGAGCCCTGCACCAGGCTAAGGAGGAGCTGGCCCGGATGCTGCGTGAGCACCAGGAGCTGATG
AGTATGAAGCTGGCCCTGGACATTGAGATCGCCACCTACCGCAAGCTGCTGGAGGGGGAGGAGTGCAGGA
TGTCTGGAGAACACACCAGTGCTGTGAGCATTTCTGTCATCAGTAGTTCCGCACCTGGGACAGTCGGTGC
GGGGACCAGTTTCGGATTCAGTAGCGCTGGGACCTATGGCTACCGGCAGAGCTCTGTCGCTGGGGGCTAT
GGCATACTGTCAGGGGGCTGTGTCACTGGTAGTGGGAACTGCAGCCCCCGTGGAGATACCAAGAACAGAC
TGGGTAGTGCAAGTGAATTTAAGGAGGTTTCGGGAAAGACCTTGGCTTTGGGCTCACCCTCAAAGAAAAC
CATGAGATAA

Translation (539 aa):
MNRQFTCKPGVANRGFSGCSAVLSGGSSSSYRAAGKGLSGGFSSRSLYSLRSPRSISFNVASSSGRTGGY
GFGRNRASGFAGSMFGSGALGPSNPSLCLPGGIHQVTVNKSLLAPLNVELDPEIQKVRAQEREQIKALNN
KFASFIDKVRFLEQQNQVLQTKWELLQQLDLSNCRRNLEPVYEAHISSLQKQLDSLSGDRVRLDSELRGM
RDAVEDCKKRYEEEINKRTTAENEFVVLKKDVDAAYMSKVELQAKVDALDGEIKFLKCLYEGEITQMQSH
ISDTSVVLSMDNNRNLDLDSIIAEVRAQYEDIALKSKAEAEMVYQTKFQELQLAAGRHGDDLKHTRNEIS
ELTRLIQRLRSEIESVKKQCSNLETAIADAEQRGDCALKDARAKLDELERALHQAKEELARMLREHQELM
SMKLALDIEIATYRKLLEGEECRMSGEHTSAVSISVISSSAPGTVGAGTSFGFSSAGTYGYRQSSVAGGY
GILSGGCVTGSGNCSPRGDTKNRLGSASEFKEVSGKTLALGSPSKKTMR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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