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Report for CCDS27265.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27265.1 Public Mus musculus 14 Cysltr2 23 108 98 CCDS HistoryNCBI Gene:70086Re-query CCDS DB by CCDS ID:27265.1Re-query CCDS DB by GeneID:70086See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27265.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044664.11 ENSMUSP00000040715.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044664.11Link to Ensembl Protein Viewer:ENSMUSP00000040715.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000044664Re-query CCDS DB by Protein ID:ENSMUSP00000040715
Original member Current member EBI ENSMUST00000169168.2 ENSMUSP00000125958.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169168.2Link to Ensembl Protein Viewer:ENSMUSP00000125958.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169168Re-query CCDS DB by Protein ID:ENSMUSP00000125958
Original member NCBI NM_001162412.1 NP_001155884.1 Updated not alive Link to Nucleotide Sequence:NM_001162412.1Link to Protein Sequence:NP_001155884.1Re-query CCDS DB by Nucleotide ID:NM_001162412Re-query CCDS DB by Protein ID:NP_001155884
Current member NCBI NM_001162412.2 NP_001155884.1 Accepted alive Link to Nucleotide Sequence:NM_001162412.2Link to Protein Sequence:NP_001155884.1Re-query CCDS DB by Nucleotide ID:NM_001162412Re-query CCDS DB by Protein ID:NP_001155884Link to BLAST:NP_001155884.1
Original member NCBI NM_133720.3 NP_598481.2 Updated not alive Link to Nucleotide Sequence:NM_133720.3Link to Protein Sequence:NP_598481.2Re-query CCDS DB by Nucleotide ID:NM_133720Re-query CCDS DB by Protein ID:NP_598481
Current member NCBI NM_133720.4 NP_598481.2 Accepted alive Link to Nucleotide Sequence:NM_133720.4Link to Protein Sequence:NP_598481.2Re-query CCDS DB by Nucleotide ID:NM_133720Re-query CCDS DB by Protein ID:NP_598481Link to BLAST:NP_598481.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155884.1 309 Q920A1 309 100% 0 0
NP_598481.2 309 Q920A1 309 100% 0 0

Chromosomal Locations for CCDS 27265.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 73029339 73030268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAAGTAACTGGGACCCCCAGCAGTTATAGTAACAGGAACTGTACAATAGAAAACTTTAAGAAGGAAT
TTTACCCCATCATATACCTGATAATATTTTTCTGGGGAGCCTTGGGAAATGGCTTTTCCATATATGTCTT
TCTACAGACTTGCAAGAAGTCCACATCTGTAAATGTTTTCATGCTCAACCTGGCCACTTCCGATTTTCTA
TTCATCAGCACCTTGCCCTTCAGGGCTGACTATTATTTCAGAGGTTCCAATTGGATATTTGGGGACTTGG
CCTGCAGAGTCATGTCTTATTCCTTATATGTCAACATGTATACTAGCATTTATTTCCTAACTGTGCTGAG
TGTGGTGCGTTTCCTGGCCACAGTCCACCCCTTCCGGATGTTCCATGTCACCAGTGTCAGGAGTGCCTGG
ATCCTCTGTGGGATCATATGGGTTTTCATCATGGCTTCCTCAGCCCTGCTTCTGGTGAACGGCCAAGAGG
AGAAAGATAACATTATATCATGCTTGGAGCTGAGTCCTCAAAAGTTTAAAAGTCTCCTGATCATGAACCA
CATTGCAGTAGCGGTAGGCTTCTTGCTCCCATTTCTCACGCTCACCGTCTGCTACCTGCTGATCATCCGG
ATCTTGTTAAAGGCTGAGATTCCAGAATCAGGTCCACGTGCTGCTCATAGGAAGGCGCTGACCACCATTG
TCATTGCCATGATCACCTTCCTCCTCTGTTTTCTGCCATACCATGCACTGCGGACCCTCCACTTGGTCAC
ATGGGATAAAGATTCATGTGGGGATGTGCTACATAAGGCCACAGTCATCACACTGACCATGGCTGCAGCC
AATAGCTGCTTCAATCCCTTTCTCTATTATTTTGCTGGGGAGAATTTCAAAGCTCGATTAAGGGCTATAT
TCAGCAAAGTTCATCTATAG

Translation (309 aa):
MEVTGTPSSYSNRNCTIENFKKEFYPIIYLIIFFWGALGNGFSIYVFLQTCKKSTSVNVFMLNLATSDFL
FISTLPFRADYYFRGSNWIFGDLACRVMSYSLYVNMYTSIYFLTVLSVVRFLATVHPFRMFHVTSVRSAW
ILCGIIWVFIMASSALLLVNGQEEKDNIISCLELSPQKFKSLLIMNHIAVAVGFLLPFLTLTVCYLLIIR
ILLKAEIPESGPRAAHRKALTTIVIAMITFLLCFLPYHALRTLHLVTWDKDSCGDVLHKATVITLTMAAA
NSCFNPFLYYFAGENFKARLRAIFSKVHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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