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Report for CCDS26954.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26954.1 Public Mus musculus 14 Nrg3 23 108 98 CCDS HistoryNCBI Gene:18183Re-query CCDS DB by CCDS ID:26954.1Re-query CCDS DB by GeneID:18183See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26954.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000166968.8 ENSMUSP00000136884.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000166968.8Link to Ensembl Protein Viewer:ENSMUSP00000136884.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000166968Re-query CCDS DB by Protein ID:ENSMUSP00000136884
Original member Current member NCBI NM_008734.3 NP_032760.1 Accepted alive Link to Nucleotide Sequence:NM_008734.3Link to Protein Sequence:NP_032760.1Re-query CCDS DB by Nucleotide ID:NM_008734Re-query CCDS DB by Protein ID:NP_032760Link to BLAST:NP_032760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032760.1 713 O35181 713 100% 0 0

Chromosomal Locations for CCDS 26954.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 38370533 38371040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38371277 38371348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38376334 38376483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38381624 38381751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38397230 38397350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38407114 38407216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38509330 38509356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 38668218 38668291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39011969 39012098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 39471972 39472800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2142 nt):
ATGAGTGAAGGGGCGGCCGGTGCCTCGCCACCTGGTGCCGCTTCGGCAGCCGCCGCCTCAGCCGAGGAGG
GCACCGCGGCGGCTGCGGCGGCGGCGGCGGCGGGCGGGGGCCCGGACGGCGGCGGAGAAGGGGCGGCCGA
ACCTCCCCGGGAGTTACGCTGTAGCGACTGCATCGTGTGGAACCGGCAGCAGACGTGGTTGTGCGTGGTG
CCTCTGTTCATCGGCTTCATCGGCCTGGGGCTCAGCCTCATGCTGCTTAAATGGATCGTGGTAGGCTCCG
TCAAGGAGTACGTGCCCACGGACCTGGTGGACTCCAAGGGAATGGGCCAGGACCCCTTCTTCCTCTCCAA
GCCCAGCTCTTTCCCCAAGGCTATGGAAACCACCACAACAACCACTTCTACCACGTCCCCCGCCACCCCC
TCTGCCGGCGGCGCCGCTTCTTCCAGGACGCCTAACCGGATTAGCACCCGCTTGACCACCATCACACGGG
CACCCACCCGCTTCCCTGGGCACCGGGTTCCCATCCGGGCTAGCCCGCGCTCTACCACAGCACGGAACAC
TGCTGCCCCTCCGACGGTCCTGTCCACCACGGCCCCTTTCTTCAGTAGCAGCACGCCCGGCTCCCGACCC
CCGATGCCAGGAGCCCCCAGTACGCAGGCGATGCCTTCCTGGCCCACTGCGGCGTATGCTACCTCCTCCT
ACCTCCACGATTCCACTCCCTCCTGGACCCTGTCACCCTTTCAGGATGCTGCTGCCGCCTCTTCCTCCTC
ACCCTCTTCCACCTCCTCCACTACCACCACCCCAGAAACTAGCACCAGCCCCAAATTTCATACTACAACA
TACTCCACTGAACGATCTGAGCACTTCAAACCCTGTCGAGACAAGGACCTGGCGTATTGTCTCAATGATG
GTGAATGCTTTGTGATTGAGACCCTGACAGGATCCCATAAGCACTGTCGGTGCAAGGAAGGCTACCAAGG
AGTCCGTTGTGATCAATTTCTGCCGAAAACAGACTCCATCTTATCGGATCCAACAGACCACTTGGGGATT
GAATTCATGGAGAGTGAAGACGTTTATCAAAGGCAGGTGCTGTCAATTTCATGTATCATCTTTGGAATTG
TCATCGTGGGCATGTTCTGTGCAGCATTCTACTTCAAAAGCAAGAAACAAGCTAAACAAATTCAGGAGCA
CCTGAAAGAGTCACAGAATGGGAAGAACTACAGCCTCAAGGCATCCAGCACAAAGTCTGAGAGCTTGATG
AAGAGCCATGTCCATCTACAAAATTATTCAAAGGCGGATAGGCATCCTGTGACTGCGCTGGAGAAAATAA
TGGAGTCAAGTTTTTCAGCTCCCCAGTCGTTCCCAGAAGTCACTTCTCCTGACCGAGGAAGCCAGCCTAT
CAAGCACCACAGCCCAGGACAAAGGAGTGGGATGTTGCATAGGAATACTTTCAGAAGGGCACCACCCTCA
CCCCGAAGTCGACTGGGTGGTATTGTAGGACCAGCATATCAACAACTTGAAGAATCAAGAATTCCAGACC
AGGATACGATACCTTGCCAAGGGATAGAGGTCAGGAAGACTATATCCCACCTGCCTATACAGCTGTGGTG
TGTTGAAAGACCCCTGGACTTAAAGTATGTGTCCAATGGCTTAAGAACCCAACAAAATGCATCAATAAAT
ATGCAACTGCCTTCAAGAGAGACAAACCCCTATTTTAATAGCTTGGATCAAAAGGACCTGGTGGGTTATT
TATCCCCAAGGGCCAATTCTGTGCCCATCATCCCGTCGATGGGTCTAGAAGAAACCTGCATGCAAATGCC
AGGGATTTCTGACGTCAAAAGCATTAAATGGTGCAAAAACTCCTACTCCGCTGACATTGTCAACGCGAGT
ATGCCAGTCAGTGATTGTCTTCTAGAAGAACAACAGGAAGTGAAAATATTACTAGAGACTGTGCAGGAAC
AGATCCGGATTCTGACTGATGCCAGACGGTCAGAAGACTTCGAACTGGCCAGCATGGAAACTGAGGACAG
TGCGAGCGAAAACACAGCCTTTCTCCCCCTGAGTCCCACGGCCAAATCAGAACGAGAGGCACAATTTGTC
TTAAGAAATGAAATACAAAGAGACTCTGTGCTAACCAAGTGA

Translation (713 aa):
MSEGAAGASPPGAASAAAASAEEGTAAAAAAAAAGGGPDGGGEGAAEPPRELRCSDCIVWNRQQTWLCVV
PLFIGFIGLGLSLMLLKWIVVGSVKEYVPTDLVDSKGMGQDPFFLSKPSSFPKAMETTTTTTSTTSPATP
SAGGAASSRTPNRISTRLTTITRAPTRFPGHRVPIRASPRSTTARNTAAPPTVLSTTAPFFSSSTPGSRP
PMPGAPSTQAMPSWPTAAYATSSYLHDSTPSWTLSPFQDAAAASSSSPSSTSSTTTTPETSTSPKFHTTT
YSTERSEHFKPCRDKDLAYCLNDGECFVIETLTGSHKHCRCKEGYQGVRCDQFLPKTDSILSDPTDHLGI
EFMESEDVYQRQVLSISCIIFGIVIVGMFCAAFYFKSKKQAKQIQEHLKESQNGKNYSLKASSTKSESLM
KSHVHLQNYSKADRHPVTALEKIMESSFSAPQSFPEVTSPDRGSQPIKHHSPGQRSGMLHRNTFRRAPPS
PRSRLGGIVGPAYQQLEESRIPDQDTIPCQGIEVRKTISHLPIQLWCVERPLDLKYVSNGLRTQQNASIN
MQLPSRETNPYFNSLDQKDLVGYLSPRANSVPIIPSMGLEETCMQMPGISDVKSIKWCKNSYSADIVNAS
MPVSDCLLEEQQEVKILLETVQEQIRILTDARRSEDFELASMETEDSASENTAFLPLSPTAKSEREAQFV
LRNEIQRDSVLTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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