CCDS Report for Consensus CDS

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Report for CCDS26537.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
26537.1	Public	Mus musculus	13	Unc5a	23	108	98

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26537.1

Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status
EBI	ENSMUST00000026994.13	ENSMUSP00000026994.7	Accepted	alive
NCBI	NM_153131.4	NP_694771.1	Updated	not alive
NCBI	NM_153131.5	NP_694771.1	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_694771.1	898	Q8K1S4-1	898	100%	0	0

Chromosomal Locations for CCDS 26537.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)

Genome Browser links:

Chromosome	Start	Stop
13	54949662	54949731
13	54990880	54991101
13	54995797	54995940
13	54996160	54996263
13	54996404	54996584
13	54997193	54997360
13	54997916	54998080
13	54999336	54999524
13	54999622	54999924
13	55002466	55002553
13	55002833	55003001
13	55003183	55003416
13	55003542	55003691
13	55003778	55003942
13	55004478	55004656
13	55004806	55004971

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2697 nt):
ATGGCCGTCCGGCCCGGCCTGTGGCCAGCGCTCCTGGGCATAGTCCTCACTGCCTGGCTTCGTGGTTCGG GTGCCCAGCAGAGTGCCACAGTGGCCAACCCAGTGCCTGGTGCCAACCCGGACCTGCTGCCCCACTTCCT GGTAGAGCCGGAGGACGTGTACATTGTCAAGAACAAGCCCGTGCTGCTGGTGTGCAAGGCTGTGCCCGCC ACCCAGATCTTCTTCAAGTGCAACGGGGAATGGGTTCGCCAGGTCGATCACGTCATTGAACGCAGCACTG ACGGCAGCAGCGGATTGCCAACCATGGAGGTCCGGATCAACGTATCAAGGCAGCAGGTCGAGAAAGTGTT TGGGCTGGAGGAGTACTGGTGCCAGTGTGTGGCATGGAGCTCCTCAGGAACCACCAAAAGCCAGAAGGCC TACATCCGGATTGCCTATTTGCGCAAGAACTTTGAGCAGGAGCCGCTGGCCAAGGAAGTGTCACTGGAGC AAGGCATTGTGCTACCTTGTCGCCCCCCGGAAGGAATCCCCCCAGCTGAGGTGGAGTGGCTCCGAAATGA GGACCTCGTGGACCCCTCCCTCGACCCCAATGTGTACATCACACGGGAGCACAGCCTAGTCGTGCGGCAG GCCCGCCTGGCCGACACTGCCAACTACACCTGCGTGGCCAAGAACATCGTGGCCCGTCGCCGAAGCGCCT CTGCGGCCGTCATTGTTTATGTGAACGGTGGGTGGTCGACGTGGACCGAGTGGTCCGTCTGCAGTGCCAG CTGTGGGCGTGGCTGGCAGAAACGGAGCCGGAGCTGCACCAACCCGGCACCTCTCAACGGGGGCGCCTTC TGTGAGGGGCAGAATGTCCAGAAAACAGCCTGCGCCACTCTGTGCCCAGTGGATGGGAGCTGGAGCCCAT GGAGTAAGTGGTCAGCCTGCGGGCTTGACTGCACCCACTGGCGGAGCCGGGAGTGCTCCGACCCAGCGCC CCGCAACGGAGGTGAGGAGTGCCGGGGTGCTGACCTGGACACCCGCAACTGTACCAGTGACCTCTGCCTG CACACCTCTTCCGGCCCCGAGGACGTGGCTCTCTACATCGGCCTCGTCGCCGTGGCCGTGTGCCTCATCT TGCTGCTGCTGGTCCTCGTCCTCATCTACTGCCGCAAGAAGGAAGGACTGGACTCAGACGTGGCTGACTC ATCCATCCTTACCTCAGGCTTCCAGCCTGTCAGCATCAAGCCCAGCAAAGCAGACAATCCCCATCTGCTC ACCATCCAACCGGACCTCAGCACCACCACGACCACCTACCAGGGCAGCCTGTGTCCCCGGCAGGATGGAC CCAGCCCCAAGTTCCAGCTCTCTAATGGTCACCTGCTCAGCCCACTGGGCAGTGGCCGCCATACGCTGCA CCACAGCTCCCCCACCTCTGAGGCTGAGGACTTCGTCTCCCGCCTCTCCACCCAAAACTACTTTCGTTCT CTGCCCCGCGGTACCAGCAACATGGCCTATGGGACCTTCAACTTCCTCGGGGGCCGGCTGATGATCCCTA ACACAGGAATCAGCCTCCTCATACCCCCGGACGCCATCCCCCGAGGAAAGATCTACGAGATCTACCTCAC TCTGCACAAGCCAGAAGACGTGAGGTTGCCCCTAGCTGGCTGTCAGACCCTGCTGAGTCCTATCGTTAGC TGTGGGCCCCCAGGAGTCCTGCTCACCCGGCCAGTCATCCTTGCCATGGACCACTGCGGGGAGCCCAGTC CCGACAGCTGGAGCCTGCGCCTCAAAAAGCAGTCCTGTGAGGGCAGCTGGGAGGACGTGCTGCACCTTGG TGAGGAGTCGCCCTCTCATCTCTACTACTGCCAGCTGGAGGCCGGGGCCTGCTATGTCTTCACCGAGCAG CTAGGCCGCTTTGCCCTGGTGGGAGAGGCCCTCAGCGTGGCTGCCACCAAGCGCCTCAGGCTCCTTCTGT TTGCCCCTGTGGCCTGTACGTCCCTCGAGTACAACATCCGAGTGTACTGCCTGCACGACACCCACGATGC TCTCAAGGAGGTGGTGCAGCTGGAGAAGCAGCTGGGTGGACAGCTGATCCAGGAGCCCCGTGTCCTGCAC TTCAAAGACAGTTACCACAACCTACGTCTGTCCATCCACGACGTGCCCAGCTCCCTGTGGAAGAGCAAGC TCCTTGTCAGCTACCAGGAGATCCCTTTTTACCACATCTGGAATGGCACTCAGCAGTATCTGCACTGCAC CTTCACCCTGGAGCGCGTCAATGCCAGCACCAGCGACCTGGCCTGCAAGGTGTGGGTGTGGCAGGTGGAG GGAGATGGACAGAGCTTCAACATCAACTTTAACATCACTAAGGACACGAGGTTTGCTGAAATGCTGGCTC TGGAGAGTGAAGGGGGGGTCCCAGCCCTGGTGGGCCCCAGTGCCTTCAAGATCCCCTTCCTCATTCGGCA AAAGATCATTACCAGCCTGGACCCACCCTGCAGCCGGGGCGCCGACTGGCGAACTCTAGCCCAGAAACTT CACCTGGACAGCCATCTTAGCTTCTTTGCCTCCAAGCCCAGCCCTACAGCCATGATCCTCAACCTATGGG AGGCGCGGCACTTCCCCAACGGCAACCTCGGCCAGCTGGCCGCAGCTGTGGCCGGACTGGGCCAGCCAGA TGCTGGCCTCTTCACCGTGTCAGAGGCCGAGTGCTGA
Translation (898 aa):
MAVRPGLWPALLGIVLTAWLRGSGAQQSATVANPVPGANPDLLPHFLVEPEDVYIVKNKPVLLVCKAVPA TQIFFKCNGEWVRQVDHVIERSTDGSSGLPTMEVRINVSRQQVEKVFGLEEYWCQCVAWSSSGTTKSQKA YIRIAYLRKNFEQEPLAKEVSLEQGIVLPCRPPEGIPPAEVEWLRNEDLVDPSLDPNVYITREHSLVVRQ ARLADTANYTCVAKNIVARRRSASAAVIVYVNGGWSTWTEWSVCSASCGRGWQKRSRSCTNPAPLNGGAF CEGQNVQKTACATLCPVDGSWSPWSKWSACGLDCTHWRSRECSDPAPRNGGEECRGADLDTRNCTSDLCL HTSSGPEDVALYIGLVAVAVCLILLLLVLVLIYCRKKEGLDSDVADSSILTSGFQPVSIKPSKADNPHLL TIQPDLSTTTTTYQGSLCPRQDGPSPKFQLSNGHLLSPLGSGRHTLHHSSPTSEAEDFVSRLSTQNYFRS LPRGTSNMAYGTFNFLGGRLMIPNTGISLLIPPDAIPRGKIYEIYLTLHKPEDVRLPLAGCQTLLSPIVS CGPPGVLLTRPVILAMDHCGEPSPDSWSLRLKKQSCEGSWEDVLHLGEESPSHLYYCQLEAGACYVFTEQ LGRFALVGEALSVAATKRLRLLLFAPVACTSLEYNIRVYCLHDTHDALKEVVQLEKQLGGQLIQEPRVLH FKDSYHNLRLSIHDVPSSLWKSKLLVSYQEIPFYHIWNGTQQYLHCTFTLERVNASTSDLACKVWVWQVE GDGQSFNINFNITKDTRFAEMLALESEGGVPALVGPSAFKIPFLIRQKIITSLDPPCSRGADWRTLAQKL HLDSHLSFFASKPSPTAMILNLWEARHFPNGNLGQLAAAVAGLGQPDAGLFTVSEAEC

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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