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Report for CCDS26417.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26417.1 Public Mus musculus 13 Dusp22 23 108 98 CCDS HistoryNCBI Gene:105352Re-query CCDS DB by CCDS ID:26417.1Re-query CCDS DB by GeneID:105352See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26417.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091672.12 ENSMUSP00000089260.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091672.12Link to Ensembl Protein Viewer:ENSMUSP00000089260.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000091672Re-query CCDS DB by Protein ID:ENSMUSP00000089260
Original member NCBI NM_134068.3 NP_598829.1 Updated not alive Link to Nucleotide Sequence:NM_134068.3Link to Protein Sequence:NP_598829.1Re-query CCDS DB by Nucleotide ID:NM_134068Re-query CCDS DB by Protein ID:NP_598829
Current member NCBI NM_134068.4 NP_598829.1 Accepted alive Link to Nucleotide Sequence:NM_134068.4Link to Protein Sequence:NP_598829.1Re-query CCDS DB by Nucleotide ID:NM_134068Re-query CCDS DB by Protein ID:NP_598829Link to BLAST:NP_598829.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_598829.1 184 Q99N11-1 184 100% 0 0

Chromosomal Locations for CCDS 26417.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 30660126 30660146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30668805 30668838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30672393 30672475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30696236 30696285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30705626 30705700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30707930 30708101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30708677 30708749 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30710706 30710752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGGGGAGTGGGATGAGCCAGATCCTGCCGGGCCTGTACATTGGCAACTTCAAAGACGCAAGAGATGCAG
AACAGTTGAGCAGGAACAAGGTGACACACATTCTTTCTGTGCACGATACTGCCAGGCCCATGTTGGAGGG
AGTTAAATACCTGTGTATTCCAGCGGCAGACACACCATCTCAAAACCTGACAAGACATTTCAAAGAAAGC
ATTAAATTCATTCATGAGTGCCGACTCCAGGGTGAGAGCTGTCTTGTACATTGCCTGGCTGGGGTCTCCA
GGAGTGTGACATTGGTGATCGCATACATCATGACTGTCACCGACTTTGGCTGGGAAGATGCCTTGCACAC
TGTTCGTGCGGGGAGGTCCTGTGCCAACCCCAACCTGGGCTTTCAAAGGCAGCTGCAGGAGTTTGAGAAA
CATGAAGTGCACCAGTATCGGCAATGGCTGAGAGAAGAGTATGGAGAGAACCCTTTGCGGGATGCAGAAG
AAGCCAAAAATATTCTGGCTGCCCCGGGAATTCTGAAGTACTGGGCCTTTCTCAGAAGACTGTAA

Translation (184 aa):
MGSGMSQILPGLYIGNFKDARDAEQLSRNKVTHILSVHDTARPMLEGVKYLCIPAADTPSQNLTRHFKES
IKFIHECRLQGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRSCANPNLGFQRQLQEFEK
HEVHQYRQWLREEYGENPLRDAEEAKNILAAPGILKYWAFLRRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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