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Report for CCDS26416.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26416.1 Public Mus musculus 13 Uqcrfs1 23 108 98 CCDS HistoryNCBI Gene:66694Re-query CCDS DB by CCDS ID:26416.1Re-query CCDS DB by GeneID:66694See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26416.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042834.3 ENSMUSP00000045284.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042834.3Link to Ensembl Protein Viewer:ENSMUSP00000045284.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000042834Re-query CCDS DB by Protein ID:ENSMUSP00000045284
Original member Current member NCBI NM_025710.2 NP_079986.1 Accepted alive Link to Nucleotide Sequence:NM_025710.2Link to Protein Sequence:NP_079986.1Re-query CCDS DB by Nucleotide ID:NM_025710Re-query CCDS DB by Protein ID:NP_079986Link to BLAST:NP_079986.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079986.1 274 Q9CR68 274 100% 0 0

Chromosomal Locations for CCDS 26416.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 30540731 30541341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 30545034 30545247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (825 nt):
ATGTTGTCGGTCGCCGCCCGCTCGGGCCCGTTCGCGCCCGTCCTATCGGCCACTTCCCGCGGGGTGGCGG
GCGCGCTGCGTCCTCTGCTGCAAGGCGCGGTGCCCGCCGCCTCGGAGCCACCTGTTCTGGATGTGAAGCG
ACCCTTCCTGTGCCGCGAGTCCCTGAGTGGCCAGGCCGCAGCCCGGCCTTTGGTGGCCACGGTGGGCCTG
AACGTTCCTGCTTCTGTCCGTTTTTCCCATACAGATGTCAAGGTGCCCGACTTCTCTGACTATCGTCGTG
CTGAAGTTCTTGATAGCACAAAATCTTCTAAAGAAAGCAGTGAGGCTAGAAAAGGCTTCTCTTACCTGGT
AACTGCAACTACTACTGTGGGTGTTGCTTATGCGGCCAAAAATGTGGTCTCCCAGTTTGTTTCCAGCATG
AGTGCTTCTGCTGACGTACTGGCCATGTCGAAGATCGAGATCAAGTTGTCTGATATCCCTGAAGGGAAGA
ACATGGCTTTTAAATGGAGAGGCAAACCTCTGTTTGTGCGCCATAGAACCAAGAAGGAGATTGACCAGGA
AGCTGCAGTCGAAGTGTCCCAGTTAAGGGACCCACAGCATGATTTAGATCGAGTAAAGAAACCTGAATGG
GTTATTCTGATAGGTGTCTGTACTCATCTTGGTTGTGTACCCATTGCAAACGCAGGAGATTTTGGTGGCT
ATTATTGCCCCTGCCATGGGTCACACTATGACGCCTCTGGCAGGATCAGGAAGGGCCCTGCACCTCTCAA
CCTGGAAGTGCCTGCCTACGAGTTCACCAGTGATGATGTAGTTGTTGTGGGTTAG

Translation (274 aa):
MLSVAARSGPFAPVLSATSRGVAGALRPLLQGAVPAASEPPVLDVKRPFLCRESLSGQAAARPLVATVGL
NVPASVRFSHTDVKVPDFSDYRRAEVLDSTKSSKESSEARKGFSYLVTATTTVGVAYAAKNVVSQFVSSM
SASADVLAMSKIEIKLSDIPEGKNMAFKWRGKPLFVRHRTKKEIDQEAAVEVSQLRDPQHDLDRVKKPEW
VILIGVCTHLGCVPIANAGDFGGYYCPCHGSHYDASGRIRKGPAPLNLEVPAYEFTSDDVVVVG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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