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Report for CCDS26037.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26037.1 Public Mus musculus 12 Acot5 23 108 98 CCDS HistoryNCBI Gene:217698Re-query CCDS DB by CCDS ID:26037.1Re-query CCDS DB by GeneID:217698See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26037.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046422.10 ENSMUSP00000042019.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046422.10Link to Ensembl Protein Viewer:ENSMUSP00000042019.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000046422Re-query CCDS DB by Protein ID:ENSMUSP00000042019
Original member Current member NCBI NM_145444.3 NP_663419.3 Accepted alive Link to Nucleotide Sequence:NM_145444.3Link to Protein Sequence:NP_663419.3Re-query CCDS DB by Nucleotide ID:NM_145444Re-query CCDS DB by Protein ID:NP_663419Link to BLAST:NP_663419.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663419.3 421 Q6Q2Z6 421 100% 0 0

Chromosomal Locations for CCDS 26037.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 84069467 84069923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84073330 84073532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 84075304 84075909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1266 nt):
ATGGTGCCAACAGTAAGCCTGGAGCCCACGGGCCACAGCTGCTGGGACGAACCGCTGAGCATCGCTGTGC
GCGGCTTGGCCCCGGAGCAGCCCGTCACACTGCGCACTGCCCTGCGCGACGAGAAGGGCGCGCTCTTCCG
AGCCCACGCGCGCTACCGCGCGGACTCCCACGGCGAGCTGGACCTGGCGCGCACGCCCGCGCTGGGCGGC
AGCTTCTCGGGGCTCGAGCCCATGGGGCTGCTCTGGGCCATGGAGCCCGATCGGCCTTTCTGGCGCCTGA
TCAAGCGCGACGTGCAGACGCCCTTCGTGGTGGAGCTGGAGGTGCTGGACGGACACGAGCCCGACGGCGG
GCGGCTGCTGGCGCGGGCGGTGCACGAGCGTCACTTCATGGCTCCCGGGGTGCGGCGCGTGCCCGTGCGC
GAGGGCCGGGTGCGCGCCACGCTCTTTCTGCCCCCAGGAACTGGACCCTTTCCTGGGATCATAGACCTTT
TTGGAGTTGGAGGTGGCCTTCTGGAGTATCGGGCGAGCCTGCTGGCTGGGAAGGGCTTTGCCGTCATGGC
TCTGGCTTATTATAAATATGATGACCTCCCTAAGGTTATAGACATCCTTCATCTGGAGTACTTTGAGGAA
GCTGTGACCTACCTGCTCAGTCACCCTCAGGTCAAGGGTCCAGGAGTTGGCCTGCTAGGGATTTCCAAAG
GGGCTGAACTCTCCCTCTCCATGGCTTCTTTCCTGAAAGGCATCACGGCCGCTGTCGTAATCAATGGCGC
CACGGTCAACGTTATTTCAACATTATACTACAAGGAAGAGAGTCTGCCTGGTTTGGGCATGCACCTAGAA
AGGATCAAGGTGACCAAAGATGGGTTTAAAGATATTATAGATATCCTGAATGTCCCTCTAGAAGCTCCAG
ACCAGAAGAGCCTCATCCCCTTGGAAAGGTCTGACACGGCCTTCCTGTTCCTCGTAGGTCAGGACGACCA
CAACTGGAAGAGCGAGTTCTATGCCAGAGAGGCCTCCAAACGCCTGCAGGCGCACGGGAAGGAGAAGCCC
CAGATTGTCTGCTACCCCAAAACAGGACACCACATTGAACCCCCTTACATCCCTTGGTCCATAGCTGCCC
CCCACAGCTATTTTGATAAGCCTATCCTCCTTGGAGGGGAGCCTAGGGCTCATGCCATGGCCCAGGTGGA
CGCCTGGCAGCGGCTCCAGACTTTTTTCCATAAACATTTGAGTGGGGACAAGAGGCCAAGCCCAGCAAAA
CTATGA

Translation (421 aa):
MVPTVSLEPTGHSCWDEPLSIAVRGLAPEQPVTLRTALRDEKGALFRAHARYRADSHGELDLARTPALGG
SFSGLEPMGLLWAMEPDRPFWRLIKRDVQTPFVVELEVLDGHEPDGGRLLARAVHERHFMAPGVRRVPVR
EGRVRATLFLPPGTGPFPGIIDLFGVGGGLLEYRASLLAGKGFAVMALAYYKYDDLPKVIDILHLEYFEE
AVTYLLSHPQVKGPGVGLLGISKGAELSLSMASFLKGITAAVVINGATVNVISTLYYKEESLPGLGMHLE
RIKVTKDGFKDIIDILNVPLEAPDQKSLIPLERSDTAFLFLVGQDDHNWKSEFYAREASKRLQAHGKEKP
QIVCYPKTGHHIEPPYIPWSIAAPHSYFDKPILLGGEPRAHAMAQVDAWQRLQTFFHKHLSGDKRPSPAK
L


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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