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Report for CCDS25522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25522.1 Public Mus musculus 11 Wnt9b 23 108 98 CCDS HistoryNCBI Gene:22412Re-query CCDS DB by CCDS ID:25522.1Re-query CCDS DB by GeneID:22412See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25522.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000018630.2 ENSMUSP00000018630.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000018630.2Link to Ensembl Protein Viewer:ENSMUSP00000018630.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000018630Re-query CCDS DB by Protein ID:ENSMUSP00000018630
Original member Current member NCBI NM_011719.4 NP_035849.3 Accepted alive Link to Nucleotide Sequence:NM_011719.4Link to Protein Sequence:NP_035849.3Re-query CCDS DB by Nucleotide ID:NM_011719Re-query CCDS DB by Protein ID:NP_035849Link to BLAST:NP_035849.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035849.3 359 O35468 359 100% 0 0

Chromosomal Locations for CCDS 25522.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 103730750 103731223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 103731970 103732235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 103733623 103733879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 103749687 103749769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGCGCCCCGCGCCCGCGCTGGCCCTGGCTGCGCTCTGCCTGCTGGTGCTGCCTGCCGCTGCCGCCGCCG
CCGCCTACTTCGGCCTGACCGGTCGTGAGGTCCTGACACCCTTCCCAGGCCTGGGTACGGCAGCAGCCCC
GGCACAGGCTGGTGCTCACCTGAAGCAGTGTGACCTACTGAAGCTGTCCAGGCGGCAGAAGCAGCTCTGC
AGGCGGGAGCCCGGCCTGGCTGAGACCCTGAGGGATGCTGCACACCTGGGGCTGCTGGAATGTCAGTTCC
AGTTCAGGCAGGAGCGCTGGAACTGCAGCCTGGAGGGGAGGACTGGCCTGCTCCAGAGAGGCTTTAAGGA
GACGGCCTTCCTGTATGCAGTGTCTGCAGCTGCCCTCACGCATGCACTGGCCAGGGCCTGCAGTGCTGGG
CGCATGGAGCGCTGTACTTGTGACGACTCCCCAGGCCTGGAGAGCCGGCAGGCCTGGCAGTGGGGTGTGT
GTGGTGACAATCTGAAGTACAGCACCAAGTTCCTCAGCAACTTCCTGGGGCCCAAGAGAGGAAGCAAGGA
CCTGAGGGCGAGGGCTGACGCCCACAACACCCACGTGGGCATCAAGGCTGTGAAGAGCGGCCTGAGAACA
ACCTGCAAGTGCCATGGTGTGTCAGGCTCCTGTGCTGTTCGTACCTGTTGGAAGCAGCTCTCCCCGTTTC
GCGAGACCGGCCAGGTGCTGAAGCTACGCTATGACACGGCTGTCAAGGTGTCCAGTGCCACCAACGAGGC
CTTGGGTCGTCTGGAGCTATGGGCCCCCGCTAAGCCAGGTGGTCCCGCCAAGGGCCTAGCCCCTCGTCCC
GGGGACCTGGTCTACATGGAAGATTCTCCCAGCTTCTGCCGGCCCAGCAAGTACTCTCCGGGCACGGCAG
GCAGGGTGTGTTCTCGAGACTCCAGTTGCAGCAGCCTATGCTGTGGGCGAGGCTACGACACCCAGAGCCG
CATGGTGGTTTTCTCCTGCCACTGTCAGGTGCAGTGGTGCTGCTACGTGGAGTGCCAGCAGTGTGCACAG
CAGGAGCTCGTGTATACCTGCAAGCGCTAG

Translation (359 aa):
MRPAPALALAALCLLVLPAAAAAAAYFGLTGREVLTPFPGLGTAAAPAQAGAHLKQCDLLKLSRRQKQLC
RREPGLAETLRDAAHLGLLECQFQFRQERWNCSLEGRTGLLQRGFKETAFLYAVSAAALTHALARACSAG
RMERCTCDDSPGLESRQAWQWGVCGDNLKYSTKFLSNFLGPKRGSKDLRARADAHNTHVGIKAVKSGLRT
TCKCHGVSGSCAVRTCWKQLSPFRETGQVLKLRYDTAVKVSSATNEALGRLELWAPAKPGGPAKGLAPRP
GDLVYMEDSPSFCRPSKYSPGTAGRVCSRDSSCSSLCCGRGYDTQSRMVVFSCHCQVQWCCYVECQQCAQ
QELVYTCKR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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