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Report for CCDS24935.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24935.1 Public Mus musculus 11 Mgl2 23 108 98 CCDS HistoryNCBI Gene:216864Re-query CCDS DB by CCDS ID:24935.1Re-query CCDS DB by GeneID:216864See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24935.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041550.11 ENSMUSP00000048568.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041550.11Link to Ensembl Protein Viewer:ENSMUSP00000048568.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000041550Re-query CCDS DB by Protein ID:ENSMUSP00000048568
Original member Current member NCBI NM_145137.2 NP_660119.1 Accepted alive Link to Nucleotide Sequence:NM_145137.2Link to Protein Sequence:NP_660119.1Re-query CCDS DB by Nucleotide ID:NM_145137Re-query CCDS DB by Protein ID:NP_660119Link to BLAST:NP_660119.1

Chromosomal Locations for CCDS 24935.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 70134155 70134263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70135052 70135162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70135591 70135686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70135770 70135841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70135921 70135992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70136251 70136337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70136441 70136592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70136670 70136776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 70136921 70137113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGACAATGAGATATGAAAACTTCCAGAACTTGGAGCGGGAAGAGAAAAACCAGGAGATGAGAAATGGTG
ACAAGAAAGGAGGAATGGAGTCTCCAAAGTTTGCTCTAATTCCTTCCCAGTCCTTCCTGTGGCGCATCCT
CTCTTGGACCCACCTCCTCCTGTTCTCCCTGGGCCTCAGCCTCCTGCTACTGGTGGTCATCTCCGTGATT
GGATCCCAAAATTCCCAGTTAAGGAGGGACCTAGGCACCCTAAGAGCCATTTTAGACAACACCACCTCCA
AGATAAAGGCTGAATTCCAGTCCCTGGACTCCAGGGCTGACAACTTCGAAAAAGGGATCAGTTCTCTGAA
AGTGGATGTGGAGGATCACAGGCAGGAACTGCAGGCAGGCCGAGACTTGAGCCAGAAGGTGACTTCTCTG
GAGAGCACACTGGAGAAGAGGGAGCAGGCTCTCAAAACAGATCTGTCTGATTTAACCGACCATGTACAAC
AGCTGGAGACAGACTTGAAGGCCTTGACGTGCCAGCTGGCCAACCTCAAGAACAATGGCTCGGAAGTGGC
CTGCTGCCCGCTTCACTGGACGGAGCATGAAGGCAGCTGCTATTGGTTCTCTGAGTCTGAGAAGTCGTGG
CCTGAAGCTGACAAGTACTGCCGGCTGGAGAATTCTCACCTGGTGGTGGTCAACTCCCTGGAGGAGCAGA
ATTTTCTACAGAATCGCTTAGCCAATGTGCTTAGCTGGATGGGCCTAACGGACCAAAATGGGCCCTGGCG
ATGGGTGGATGGGACCGACTTTGACAAAGGTTTCAAGAATTGGAGGCCACTGCAGCCGGATAACTGGCAT
GGACATATGCTAGGTGGAGGCGAGGACTGTGCCCACTTTTCTTACGATGGTCGTTGGAATGACGATGTCT
GCCAGAGGCATTACCATTGGATCTGTGAAACAGAGCTGGGCAAAGCCAGCTCAGCCCACTCCCCACAACT
TATAGCCTCAGTTCCATAA

Translation (332 aa):
MTMRYENFQNLEREEKNQEMRNGDKKGGMESPKFALIPSQSFLWRILSWTHLLLFSLGLSLLLLVVISVI
GSQNSQLRRDLGTLRAILDNTTSKIKAEFQSLDSRADNFEKGISSLKVDVEDHRQELQAGRDLSQKVTSL
ESTLEKREQALKTDLSDLTDHVQQLETDLKALTCQLANLKNNGSEVACCPLHWTEHEGSCYWFSESEKSW
PEADKYCRLENSHLVVVNSLEEQNFLQNRLANVLSWMGLTDQNGPWRWVDGTDFDKGFKNWRPLQPDNWH
GHMLGGGEDCAHFSYDGRWNDDVCQRHYHWICETELGKASSAHSPQLIASVP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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