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Report for CCDS24781.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24781.1 Public Mus musculus 11 Rasd1 23 108 98 CCDS HistoryNCBI Gene:19416Re-query CCDS DB by CCDS ID:24781.1Re-query CCDS DB by GeneID:19416See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24781.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062405.7 ENSMUSP00000051959.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062405.7Link to Ensembl Protein Viewer:ENSMUSP00000051959.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000062405Re-query CCDS DB by Protein ID:ENSMUSP00000051959
Original member Current member NCBI NM_009026.5 NP_033052.1 Accepted alive Link to Nucleotide Sequence:NM_009026.5Link to Protein Sequence:NP_033052.1Re-query CCDS DB by Nucleotide ID:NM_009026Re-query CCDS DB by Protein ID:NP_033052Link to BLAST:NP_033052.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033052.1 280 O35626 280 100% 0 0

Chromosomal Locations for CCDS 24781.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59963810 59964366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 59964520 59964805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (843 nt):
ATGAAACTGGCCGCGATGATCAAGAAGATGTGCCCAAGCGACTCTGAACTGAGTATCCCGGCCAAGAACT
GCTACAGGATGGTCATCCTCGGCTCATCCAAAGTGGGCAAGACGGCCATTGTGTCGCGCTTCCTCACGGG
CCGTTTCGAGGATGCTTACACCCCTACCATCGAGGACTTCCACCGAAAGTTTTACTCGATCCGCGGCGAA
GTCTACCAGTTGGACATACTGGACACATCCGGCAATCATCCGTTTCCCGCCATGCGGCGCCTCTCTATCC
TCACAGGAGACGTTTTCATTCTGGTGTTCAGCTTAGACAACCGCGACTCATTCGAAGAGGTGCAAAGGCT
CAAACAGCAGATCCTAGACACCAAGTCCTGTCTCAAGAACAAAACCAAAGAGAATGTGGACGTGCCGCTG
GTCATTTGCGGTAACAAAGGGGACCGGGACTTCTACCGGGAAGTAGAGCAGCGGGAGATTGAGCAGCTGG
TGGGTGACGACCCTCAGCGTTGTGCCTACTTCGAGATCTCAGCCAAGAAGAACAGCAGCTTGGACCAGAT
GTTCCGTGCGCTCTTTGCCATGGCCAAGCTGCCTAGCGAGATGAGCCCCGACTTGCACCGCAAGGTATCT
GTGCAGTACTGCGACGTACTGCACAAGAAGGCTCTGAGGAACAAGAAGCTTCTGCGTGCGGGCAGCGGAG
GCGGGGGCGACCACGGCGATGCCTTTGGCATCTTGGCGCCCTTTGCTCGCAGACCCAGCGTGCACAGCGA
CCTCATGTACATTCGTGAAAAAACCAGTGTCGGCAGCCAGGCTAAGGACAAGGAGCGCTGTGTCATCAGT
TAG

Translation (280 aa):
MKLAAMIKKMCPSDSELSIPAKNCYRMVILGSSKVGKTAIVSRFLTGRFEDAYTPTIEDFHRKFYSIRGE
VYQLDILDTSGNHPFPAMRRLSILTGDVFILVFSLDNRDSFEEVQRLKQQILDTKSCLKNKTKENVDVPL
VICGNKGDRDFYREVEQREIEQLVGDDPQRCAYFEISAKKNSSLDQMFRALFAMAKLPSEMSPDLHRKVS
VQYCDVLHKKALRNKKLLRAGSGGGGDHGDAFGILAPFARRPSVHSDLMYIREKTSVGSQAKDKERCVIS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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