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Report for CCDS24288.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24288.1 Public Mus musculus 10 Cdk2 23 108 98 CCDS HistoryNCBI Gene:12566Re-query CCDS DB by CCDS ID:24288.1Re-query CCDS DB by GeneID:12566See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24288.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026415.8 ENSMUSP00000026415.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026415.8Link to Ensembl Protein Viewer:ENSMUSP00000026415.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026415Re-query CCDS DB by Protein ID:ENSMUSP00000026415
Original member NCBI NM_016756.4 NP_058036.1 Updated not alive Link to Nucleotide Sequence:NM_016756.4Link to Protein Sequence:NP_058036.1Re-query CCDS DB by Nucleotide ID:NM_016756Re-query CCDS DB by Protein ID:NP_058036
Current member NCBI NM_016756.5 NP_058036.1 Accepted alive Link to Nucleotide Sequence:NM_016756.5Link to Protein Sequence:NP_058036.1Re-query CCDS DB by Nucleotide ID:NM_016756Re-query CCDS DB by Protein ID:NP_058036Link to BLAST:NP_058036.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058036.1 298 P97377-2 298 100% 0 0

Chromosomal Locations for CCDS 24288.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128699106 128699210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128699472 128699675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128701343 128701444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128702413 128702583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128703707 128703827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128703926 128704003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128704712 128704827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGAGAACTTCCAAAAGGTGGAGAAGATTGGAGAGGGCACGTACGGAGTGGTGTACAAAGCCAAAAACA
AGTTGACGGGAGAAGTTGTGGCGCTTAAGAAGATCCGGCTCGACACTGAGACTGAAGGTGTACCCAGTAC
TGCCATCCGAGAGATCTCTCTCCTTAAGGAACTTAATCACCCTAATATCGTCAAGCTGCTGGATGTCATC
CACACAGAAAATAAGCTTTATCTGGTTTTTGAATTTCTGCACCAGGACCTCAAGAAATTCATGGATGCCT
CTGCTCTCACGGGCATTCCTCTTCCCCTCATCAAGAGCTATCTGTTCCAGCTGCTCCAGGGCCTGGCTTT
CTGCCATTCTCACCGTGTCCTTCACCGAGACCTTAAGCCCCAGAACCTGCTTATCAATGCAGAGGGGTCC
ATCAAGCTGGCAGACTTTGGACTAGCAAGAGCCTTTGGAGTCCCTGTCCGAACTTACACTCATGAGGTGG
TGACCCTGTGGTACCGAGCACCTGAAATTCTTCTGGGCTGCAAGTACTACTCCACAGCCGTGGATATCTG
GAGCCTGGGCTGCATCTTTGCTGAAATGGTGACCCGCAGGGCCCTATTCCCTGGAGATTCTGAGATTGAC
CAACTCTTCCGGATCTTTCGGACTCTGGGGACCCCAGATGAGGTGGTTTGGCCAGGAGTTACTTCTATGC
CTGATTATAAGCCAAGTTTCCCCAAGTGGGCTCGGCAAGATTTTAGCAAAGTTGTGCCTCCCCTGGATGA
AGATGGACGGAGCTTGTTATCGCAAATGCTGCACTATGACCCCAACAAGCGGATTTCAGCCAAAGCAGCC
CTGGCTCACCCTTTCTTCCAGGATGTAACTAAACCAGTGCCCCACCTTCGGCTCTGA

Translation (298 aa):
MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI
HTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGS
IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID
QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA
LAHPFFQDVTKPVPHLRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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