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Report for CCDS24217.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24217.1 Public Mus musculus 10 Usp15 23 108 98 CCDS HistoryNCBI Gene:14479Re-query CCDS DB by CCDS ID:24217.1Re-query CCDS DB by GeneID:14479See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24217.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000220377.1 ENSMUSP00000151244.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000220377.1Link to Ensembl Protein Viewer:ENSMUSP00000151244.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000220377Re-query CCDS DB by Protein ID:ENSMUSP00000151244
Original member NCBI NM_027604.4 NP_081880.2 Updated not alive Link to Nucleotide Sequence:NM_027604.4Link to Protein Sequence:NP_081880.2Re-query CCDS DB by Nucleotide ID:NM_027604Re-query CCDS DB by Protein ID:NP_081880
Current member NCBI NM_027604.5 NP_081880.2 Accepted alive Link to Nucleotide Sequence:NM_027604.5Link to Protein Sequence:NP_081880.2Re-query CCDS DB by Nucleotide ID:NM_027604Re-query CCDS DB by Protein ID:NP_081880Link to BLAST:NP_081880.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_081880.2 981 Q8R5H1-1 981 100% 0 0

Chromosomal Locations for CCDS 24217.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 123113505 123113687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123119109 123119197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123121572 123121675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123123936 123124085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123124514 123124629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123124964 123125034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123125413 123125685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123125812 123125927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123127678 123127869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123127964 123128058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123128149 123128232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123130941 123131165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123131252 123131410 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123132956 123133129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123146794 123146938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123153041 123153127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123163593 123163654 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123168227 123168372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123171100 123171226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123175843 123175973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123181673 123181800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123196827 123196915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2946 nt):
ATGGCGGAAGGCGGAGCGGCGGACCTGGACACCCAGCGTTCTGACATCGCGACGCTGCTCAAAACCTCGC
TCCGGAAAGGGGACACCTGGTATCTAGTAGATAGTCGGTGGTTCAAACAGTGGAAAAAATATGTTGGCTT
TGACAGCTGGGACAAATACCAGATGGGAGATCAAAATGTCTATCCTGGACCCATCGATAACTCTGGACTT
CTCAAAGATGGCGACGCGCAGTCACTTAAGGAGCACCTTATTGATGAGTTGGATTACATACTCTTGCCAA
CTGAGGGCTGGAATAAACTTGTCAGCTGGTACACACTGATGGAGGGCCAGGAGCCAATAGCAAGAAAGGT
GGTAGAACAGGGTATGTTTGTAAAGCACTGCAAAGTAGAAGTCTACCTCACAGAACTGAAGCTCTGTGAG
AACGGGAACATGAACAATGTTGTAACTCGGAGGTTTAGCAAAGCTGACACAATAGATACGATTGAGAAGG
AAATAAGAAAAATCTTCAATATTCCAGATGAGAAGGAGGCCAGACTGTGGAACAAGTATATGAGCAACAC
ATTTGAACCACTGAATAAGCCAGACAGCACCATCCAGGATGCCGGCCTATACCAAGGACAGGTGTTAGTG
ATAGAGCAAAAAAATGAAGATGGAACGTGGCCCAGGGGTCCCTCTACTCCTAAGTCCCCAGGTGCATCCA
ATTTTTCAACTTTACCAAAGATCTCTCCTTCATCTCTATCAAATAATTATAACAACATCAACAACAGAAA
TGTGAAAAACTCAAATTATTGTCTCCCGTCATATACTGCTTATAAGAACTATGATTATTCAGAACCTGGA
AGAAACAATGAACAGCCAGGCCTGTGTGGCTTAAGTAACTTGGGAAATACGTGTTTCATGAACTCAGCCA
TTCAGTGTTTGAGCAACACACCTCCACTTACTGAATATTTCCTCAATGATAAGTACCAAGAAGAGCTGAA
TTTTGACAATCCCTTAGGAATGAGAGGTGAAATAGCTAAATCATACGCTGAACTCATCAAGCAGATGTGG
TCTGGAAAGTTTAGCTACGTCACTCCAAGAGCATTCAAGACACAGGTAGGGCGCTTCGCACCTCAGTTCT
CTGGATATCAACAGCAGGACTGCCAAGAACTACTGGCTTTCCTGTTGGATGGACTGCACGAGGACCTGAA
TAGAATTAGGAAAAAACCCTATATCCAGTTAAAAGATGCTGATGGCAGGCCAGACAAGGTGGTTGCTGAA
GAAGCCTGGGAGAACCATTTAAAGCGAAATGATTCCATCATAGTAGACATATTCCATGGCCTTTTCAAGT
CTACGTTAGTGTGTCCTGAGTGTGCTAAGATCTCGGTGACCTTTGACCCTTTCTGTTACTTGACTCTTCC
ATTGCCTATGAAAAAAGAACGTAGCTTGGAAGTTTATTTAGTTAGAATGGATCCACTTGCTAAACCTATG
CAATACAAAGTTATTGTGCCCAAAATTGGAAATATACTAGATCTTTGTACAGCGCTGTCTGCTTTGTCGG
GAGTACCTGCAGATAAGATGATAGTCACTGACATATACAATCATAGATTTCACAGGATATTTGCCGTGGA
TGAAAACCTGAGTAGTATTATGGAGCGGGATGATATTTACGTGTTTGAAATTAACATCAACAGGGCAGAA
GACACAGAGCATGTAGTTATCCCTGTCTGCCTAAGAGAAAAATTCAGACACTCAAGTTACACTCACCACA
CTGGCTCTTCACTGTTCGGCCAGCCTTTTCTTATGGCTATACCACGAAACAATACTGAAGATAAACTCTA
TAATCTTCTACTCTTGAGAATGTGCCGGTATGTCAAAATGTCTACTGAAACTGAGGAAACAGATGGACAC
CTACGTTGCTGTGAGGACCAGAATATTAATGGGAATGGGCCAAATGGCCTACATGAAGAGGGTTCACCAA
GTGAGATGGAAACCGACGAGCCAGATGACGAGTCCAGCCAGGATCAAGAGCTTCCCTCAGAGAACGAGAA
CAGTCAGTCTGAAGATTCAGTCGGAGGAGATAACGATTCTGAAAATGGATTGTGCACTGAAGAAACATGC
AAAGGTCAACTTACGGGACACAAAAAGCGCTTGTTTACATTCCAGTTCAACAACTTAGGCAACAATGACA
TCAACTACATCAAAGACGACACCAGTCACATCCGATTCGATGACAGGCAGCTTCGGCTGGACGAAAGATC
TTTTCTCGCTTTGGACTGGGACCCTGACTTGAAGAAGAGATACTTTGATGAGAATGCTGCAGAGGATTTT
GAAAAACATGAAAGTGTGGAATACAAACCTCCAAAAAGGCCCTTTGTGAAGTTAAAAGACTGCATTGAGC
TCTTCACCACCAAGGAGAAGCTGGGTGCTGAGGACCCCTGGTATTGTCCAAATTGTAAAGAGCATCAGCA
AGCCACAAAGAAATTAGATCTGTGGTCCCTGCCTCCAGTTCTTGTGGTGCATCTCAAGAGATTCTCCTAT
AGTCGCTACATGAGAGACAAGCTAGATACATTAGTCGATTTTCCCATCAGTGACTTGGATATGTCAGAAT
TCCTAATTAACCCAAATGCAGGTCCTTGCCGCTATAATTTGATTGCTGTTTCCAACCACTATGGAGGGAT
GGGAGGAGGACATTATACTGCTTTTGCAAAAAACAAAGATGATGGGAAGTGGTACTATTTCGATGACAGT
AGCGTCTCCACTGCATCTGAAGACCAAATCGTGTCCAAGGCAGCGTACGTGCTCTTCTACCAGAGACAGG
ACACTTTCAGTGGGACTGGCTTCTTCCCTCTTGACCGAGAAACTAAAGGTGCTTCAGCTGCCACAGGTAT
CCCCCTGGAAAGTGACGAAGACAGCAATGATAATGACAATGACCTAGAAAATGAAAACTGTATGCACACT
AATTAA

Translation (981 aa):
MAEGGAADLDTQRSDIATLLKTSLRKGDTWYLVDSRWFKQWKKYVGFDSWDKYQMGDQNVYPGPIDNSGL
LKDGDAQSLKEHLIDELDYILLPTEGWNKLVSWYTLMEGQEPIARKVVEQGMFVKHCKVEVYLTELKLCE
NGNMNNVVTRRFSKADTIDTIEKEIRKIFNIPDEKEARLWNKYMSNTFEPLNKPDSTIQDAGLYQGQVLV
IEQKNEDGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDYSEPG
RNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAELIKQMW
SGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIRKKPYIQLKDADGRPDKVVAE
EAWENHLKRNDSIIVDIFHGLFKSTLVCPECAKISVTFDPFCYLTLPLPMKKERSLEVYLVRMDPLAKPM
QYKVIVPKIGNILDLCTALSALSGVPADKMIVTDIYNHRFHRIFAVDENLSSIMERDDIYVFEININRAE
DTEHVVIPVCLREKFRHSSYTHHTGSSLFGQPFLMAIPRNNTEDKLYNLLLLRMCRYVKMSTETEETDGH
LRCCEDQNINGNGPNGLHEEGSPSEMETDEPDDESSQDQELPSENENSQSEDSVGGDNDSENGLCTEETC
KGQLTGHKKRLFTFQFNNLGNNDINYIKDDTSHIRFDDRQLRLDERSFLALDWDPDLKKRYFDENAAEDF
EKHESVEYKPPKRPFVKLKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRFSY
SRYMRDKLDTLVDFPISDLDMSEFLINPNAGPCRYNLIAVSNHYGGMGGGHYTAFAKNKDDGKWYYFDDS
SVSTASEDQIVSKAAYVLFYQRQDTFSGTGFFPLDRETKGASAATGIPLESDEDSNDNDNDLENENCMHT
N


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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