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Report for CCDS24165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24165.1 Public Mus musculus 10 Csrp2 23 108 98 CCDS HistoryNCBI Gene:13008Re-query CCDS DB by CCDS ID:24165.1Re-query CCDS DB by GeneID:13008See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24165.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000020403.6 ENSMUSP00000020403.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000020403.6Link to Ensembl Protein Viewer:ENSMUSP00000020403.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000020403Re-query CCDS DB by Protein ID:ENSMUSP00000020403
Original member Current member NCBI NM_007792.4 NP_031818.3 Accepted alive Link to Nucleotide Sequence:NM_007792.4Link to Protein Sequence:NP_031818.3Re-query CCDS DB by Nucleotide ID:NM_007792Re-query CCDS DB by Protein ID:NP_031818Link to BLAST:NP_031818.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031818.3 193 P97314 193 100% 0 0

Chromosomal Locations for CCDS 24165.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 110931956 110932067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110935148 110935316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110937737 110937866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110938637 110938730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 110939211 110939287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (582 nt):
ATGCCTGTCTGGGGCGGTGGAAATAAGTGCGGGGCCTGCGGGAGAACCGTGTACCACGCGGAAGAGGTGC
AGTGCGATGGGCGGAGCTTCCATCGCTGCTGCTTCCTGTGCATGGTTTGCAGGAAAAATTTAGACAGCAC
AACAGTGGCGATTCATGATGAAGAGATCTACTGCAAATCCTGCTACGGAAAGAAGTATGGACCAAAAGGC
TATGGTTATGGCCAGGGCGCTGGCACGCTCAACATGGACCGCGGTGAGAGACTGGGCATCAAGCCAGAGA
GTGCTCAACCTCACAGGCCTACGACAAATCCAAACACTTCTAAATTTGCCCAGAAATATGGAGGAGCTGA
GAAGTGTTCCAGGTGTGGGGATTCCGTGTATGCTGCGGAGAAGATCATTGGAGCTGGGAAGCCCTGGCAC
AAAAACTGTTTCCGGTGTGCCAAGTGTGGGAAGAGTCTGGAGTCTACAACTCTGACTGAGAAAGAAGGCG
AAATCTACTGTAAAGGGTGCTACGCAAAGAACTTTGGGCCCAAGGGATTTGGCTATGGTCAAGGGGCAGG
GGCCCTTGTTCATGCTCAGTAA

Translation (193 aa):
MPVWGGGNKCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKG
YGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKYGGAEKCSRCGDSVYAAEKIIGAGKPWH
KNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKGFGYGQGAGALVHAQ


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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