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Report for CCDS23107.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23107.1 Public Mus musculus 9 Hyou1 23 108 98 CCDS HistoryNCBI Gene:12282Re-query CCDS DB by CCDS ID:23107.1Re-query CCDS DB by GeneID:12282See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23107.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066601.12 ENSMUSP00000068594.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066601.12Link to Ensembl Protein Viewer:ENSMUSP00000068594.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000066601Re-query CCDS DB by Protein ID:ENSMUSP00000068594
Original member Current member EBI ENSMUST00000161318.7 ENSMUSP00000123700.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000161318.7Link to Ensembl Protein Viewer:ENSMUSP00000123700.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000161318Re-query CCDS DB by Protein ID:ENSMUSP00000123700
Original member Current member EBI ENSMUST00000160902.7 ENSMUSP00000125594.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160902.7Link to Ensembl Protein Viewer:ENSMUSP00000125594.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160902Re-query CCDS DB by Protein ID:ENSMUSP00000125594
Original member NCBI NM_021395.4 NP_067370.3 Updated not alive Link to Nucleotide Sequence:NM_021395.4Link to Protein Sequence:NP_067370.3Re-query CCDS DB by Nucleotide ID:NM_021395Re-query CCDS DB by Protein ID:NP_067370
Current member NCBI NM_021395.5 NP_067370.3 Accepted alive Link to Nucleotide Sequence:NM_021395.5Link to Protein Sequence:NP_067370.3Re-query CCDS DB by Nucleotide ID:NM_021395Re-query CCDS DB by Protein ID:NP_067370Link to BLAST:NP_067370.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067370.3 999 Q9JKR6 999 100% 0 0

Chromosomal Locations for CCDS 23107.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 44380520 44380610 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44380816 44380909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44381054 44381132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44381254 44381408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44381514 44381590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44381842 44382023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44382453 44382568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44384109 44384301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44384437 44384571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44384662 44384744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44384830 44384962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44385118 44385305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44385567 44385705 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44387032 44387092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44387250 44387329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44387688 44387873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44388006 44388178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44388278 44388365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44388482 44388604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44388792 44388925 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44389038 44389122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44389231 44389471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44389577 44389627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44390836 44390886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 44390989 44391050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3000 nt):
ATGGCAGCCACAGTAAGAAGGCAGAGGCCAAGGAGGCTACTCTGTTGGGCCTTGGTGGCTGTCCTCTTGG
CAGACCTGTTGGCACTGAGCGACACATTGGCTGTGATGTCTGTAGACCTGGGCAGTGAATCCATGAAGGT
GGCCATTGTCAAGCCTGGAGTGCCCATGGAGATTGTATTGAACAAGGAATCTCGGAGGAAAACTCCAGTG
ACTGTGACCTTGAAAGAAAATGAAAGGTTTTTAGGTGATAGTGCAGCCGGCATGGCCATCAAGAACCCAA
AGGCTACGCTCCGTTATTTCCAGCACCTCCTTGGAAAACAGGCGGATAACCCTCATGTGGCCCTTTACCG
GTCCCGTTTCCCAGAACATGAGCTAATTGTTGACCCACAGAGGCAGACTGTGCGCTTCCAGATCAGTCCG
CAGCTGCAGTTCTCTCCCGAGGAGGTACTGGGCATGGTTCTGAACTACTCCCGTTCCTTGGCTGAAGATT
TTGCTGAACAACCCATTAAGGATGCAGTGATCACCGTGCCAGCCTTTTTCAACCAGGCTGAGCGCCGAGC
TGTGCTGCAGGCTGCTCGGATGGCTGGCCTCAAGGTGCTGCAGCTCATCAATGACAACACTGCCACAGCC
CTCAGCTACGGTGTCTTCCGCCGGAAAGATATCAATTCCACTGCACAGAACGTCATGTTCTATGACATGG
GCTCGGGCAGCACTGTGTGCACCATCGTCACCTACCAGACAGTGAAGACTAAGGAGGCTGGGATGCAACC
ACAGCTGCAGATCCGGGGCGTGGGATTTGACCGCACCCTGGGTGGCCTGGAGATGGAGCTTCGGCTTCGA
GAACACCTGGCTAAGCTCTTCAATGAGCAGCGCAAGGGCCAGAAAGCCAAGGATGTTCGGGAAAACCCCC
GGGCCATGGCCAAACTGCTTCGGGAAGCCAACCGGCTTAAAACCGTCCTGAGTGCCAACGCTGATCACAT
GGCACAGATTGAGGGCTTGATGGATGATGTGGACTTCAAGGCCAAAGTAACTCGGGTGGAATTCGAGGAG
CTGTGTGCAGATTTGTTTGACCGTGTGCCTGGACCTGTGCAGCAGGCCTTGCAGAGTGCAGAGATGAGCT
TGGATCAAATTGAGCAGGTGATCCTGGTGGGCGGGGCCACTCGTGTTCCCAAAGTTCAAGAAGTGCTGCT
CAAGGCCGTGGGCAAGGAGGAACTAGGAAAGAACATCAATGCGGACGAAGCTGCTGCCATGGGGGCTGTG
TACCAGGCAGCGGCGCTCAGCAAGGCCTTCAAAGTGAAGCCATTTGTTGTGCGGGATGCTGTCATTTACC
CAATCCTGGTGGAGTTCACAAGGGAGGTGGAGGAGGAGCCTGGGCTCCGAAGCCTGAAACACAATAAGCG
TGTGCTCTTCTCCCGAATGGGGCCCTACCCTCAGCGCAAAGTCATCACCTTTAACCGCTACAGCCATGAT
TTCAACTTCCACATCAACTACGGTGACCTGGGCTTCCTGGGGCCTGAGGATCTTCGGGTATTTGGCTCCC
AGAATCTGACCACAGTAAAACTAAAAGGCGTGGGAGAGAGCTTCAAGAAATATCCCGACTATGAGTCCAA
AGGCATCAAGGCCCACTTTAACCTGGATGAGAGTGGCGTGCTCAGTTTAGACAGGGTGGAGTCCGTATTT
GAGACCCTGGTGGAGGATAGCCCAGAGGAAGAATCTACTCTTACCAAACTTGGCAACACCATATCCAGCC
TGTTTGGAGGTGGTACCTCATCAGATGCCAAAGAGAATGGTACTGATGCTGTACAGGAGGAAGAGGAGAG
CCCCGCTGAGGGGAGCAAGGATGAGCCTGCAGAGCAGGGGGAACTCAAGGAAGAAGCTGAACCCCCAGCA
GAGGAGACCTCTCAGCCTCCACCCTCTGAGCCTAAGGGGGATGCAGCCCGTGAGGGAGAGAAACCTGATG
AAAAAGAGAGTGGGGACAAGCCTGAGGCCCAGAAGCCCAATGAGAAGGGGCAAGCAGGGCCTGAGGGTGC
TGCTCCAGCTCCTGAGGAGGACAAAAAGCCGAAACCTGCCCGGAAGCAGAAAATGGTGGAGGAGATAGGT
GTGGAGCTGGCTGTCTTGGACCTGCCTGACTTGCCAGAGGATGAGCTGGCCCGTTCTGTGCAGAAACTTG
AAGAACTGACCCTGCGCGACCTAGAGAAGCAGGAGAGGGAGAAAGCTGCCAACAGCTTGGAGGCTTTCAT
CTTTGAGACCCAGGACAAGCTGTACCAGCCTGAGTACCAGGAAGTGTCCACTGAGGAACAGCGGGAGGAG
ATCTCGGGGAAACTCAGCGCCACTTCTACCTGGCTGGAGGATGAGGGATTTGGAGCCACCACTGTGATGC
TGAAGGACAAGCTGGCTGAGCTGAGAAAGCTGTGCCAAGGGCTGTTTTTTCGGGTGGAAGAACGCAGGAA
ATGGCCAGAGCGGCTTTCAGCTCTGGATAATCTCCTCAACCATTCCAGCATTTTCCTCAAGGGTGCCCGG
CTCATCCCGGAGATGGACCAGGTCTTCACTGAAGTGGAGATGACGACATTAGAGAAAGTCATCAATGACA
CCTGGGCCTGGAAGAATGCAACTCTGGCCGAACAAGCCAAGCTTCCTGCCACAGAGAAGCCTGTGCTGCT
TTCAAAAGACATTGAGGCCAAAATGATGGCCCTGGACCGGGAGGTACAGTATCTACTCAATAAGGCCAAG
TTTACCAAGCCACGGCCACGGCCCAAAGACAAGAATGGCACCCGGGCAGAACCTCCCCTCAATGCCAGTG
CTGGTGACCAAGAGGAGAAGGTCATTCCACCTGCAGGCCAGACTGAAGAGGCGAAACCCATTTTAGAACC
TGACAAAGAAGAGACTGGTACGGAACCAGCAGACTCGGAGCCTCTGGAATTAGGAGGTCCTGGAGCTGGA
CCTGAACAGGAAGAGCAGTCAGCAGGACAGAAGCGGCCTTCAAAGAACGATGAACTATAA

Translation (999 aa):
MAATVRRQRPRRLLCWALVAVLLADLLALSDTLAVMSVDLGSESMKVAIVKPGVPMEIVLNKESRRKTPV
TVTLKENERFLGDSAAGMAIKNPKATLRYFQHLLGKQADNPHVALYRSRFPEHELIVDPQRQTVRFQISP
QLQFSPEEVLGMVLNYSRSLAEDFAEQPIKDAVITVPAFFNQAERRAVLQAARMAGLKVLQLINDNTATA
LSYGVFRRKDINSTAQNVMFYDMGSGSTVCTIVTYQTVKTKEAGMQPQLQIRGVGFDRTLGGLEMELRLR
EHLAKLFNEQRKGQKAKDVRENPRAMAKLLREANRLKTVLSANADHMAQIEGLMDDVDFKAKVTRVEFEE
LCADLFDRVPGPVQQALQSAEMSLDQIEQVILVGGATRVPKVQEVLLKAVGKEELGKNINADEAAAMGAV
YQAAALSKAFKVKPFVVRDAVIYPILVEFTREVEEEPGLRSLKHNKRVLFSRMGPYPQRKVITFNRYSHD
FNFHINYGDLGFLGPEDLRVFGSQNLTTVKLKGVGESFKKYPDYESKGIKAHFNLDESGVLSLDRVESVF
ETLVEDSPEEESTLTKLGNTISSLFGGGTSSDAKENGTDAVQEEEESPAEGSKDEPAEQGELKEEAEPPA
EETSQPPPSEPKGDAAREGEKPDEKESGDKPEAQKPNEKGQAGPEGAAPAPEEDKKPKPARKQKMVEEIG
VELAVLDLPDLPEDELARSVQKLEELTLRDLEKQEREKAANSLEAFIFETQDKLYQPEYQEVSTEEQREE
ISGKLSATSTWLEDEGFGATTVMLKDKLAELRKLCQGLFFRVEERRKWPERLSALDNLLNHSSIFLKGAR
LIPEMDQVFTEVEMTTLEKVINDTWAWKNATLAEQAKLPATEKPVLLSKDIEAKMMALDREVQYLLNKAK
FTKPRPRPKDKNGTRAEPPLNASAGDQEEKVIPPAGQTEEAKPILEPDKEETGTEPADSEPLELGGPGAG
PEQEEQSAGQKRPSKNDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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