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Report for CCDS22891.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22891.1 Public Mus musculus 9 Icam5 23 108 98 CCDS HistoryNCBI Gene:15898Re-query CCDS DB by CCDS ID:22891.1Re-query CCDS DB by GeneID:15898See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22891.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019616.5 ENSMUSP00000019616.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019616.5Link to Ensembl Protein Viewer:ENSMUSP00000019616.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000019616Re-query CCDS DB by Protein ID:ENSMUSP00000019616
Original member NCBI NM_008319.2 NP_032345.2 Updated not alive Link to Nucleotide Sequence:NM_008319.2Link to Protein Sequence:NP_032345.2Re-query CCDS DB by Nucleotide ID:NM_008319Re-query CCDS DB by Protein ID:NP_032345
Current member NCBI NM_008319.3 NP_032345.2 Accepted alive Link to Nucleotide Sequence:NM_008319.3Link to Protein Sequence:NP_032345.2Re-query CCDS DB by Nucleotide ID:NM_008319Re-query CCDS DB by Protein ID:NP_032345Link to BLAST:NP_032345.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032345.2 917 Q60625 917 100% 0 0

Chromosomal Locations for CCDS 22891.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 21032130 21032211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21033087 21033356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21033495 21033815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21034547 21034834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21035044 21035298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21035394 21035642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21036194 21036436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21036516 21036794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21036885 21037124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21037581 21037844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 21038638 21038900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2754 nt):
ATGCCGGGGCCTTCGCCAGGGCTGCGCCGAGCGCTCCTCGGCCTCTGGGCTGCCCTGGGCCTGGGGATCC
TAGGCATCTCAGCGGTCGCGCTAGAACCTTTCTGGGCGGACCTTCAGCCCCGCGTGGCGCTCGTGGAGCG
CGGGGGCTCGCTGTGGCTCAACTGCAGCACTAACTGTCCGCGGCCGGAGCGCGGTGGCCTGGAGACCTCG
CTACGCCGAAACGGGACCCAGAGGGGTCTGCGCTGGCTGGCTCGGCAGCTGGTGGACATCCGAGAGCCTG
AGACCCAGCCGGTCTGCTTCTTCCGCTGCGCGCGCCGCACACTCCAAGCGCGTGGACTCATCCGAACTTT
CCAGCGACCGGATCGGGTAGAGCTGGTGCCGCTCCCTTCTTGGCAGCCAGTGGGCGAGAACTTCACCTTG
AGCTGCAGGGTCCCGGGAGCAGGACCCCGAGCGAGCCTCACATTGACCCTGCTGCGGGGCGGCCAGGAGC
TGATTCGCCGCAGTTTCGTAGGCGAGCCACCCCGAGCGCGGGGTGCGATGCTCACCGCCAGGGTCCTGGC
ACGCAGGGAGGACCACAGGGTCAATTTCTCATGCCTCGCCGAGCTTGACCTGCGGCCACACGGCTTGGGA
CTGTTTGCAAATAGCTCGGCCCCCAGACAGCTCCGTACCTTTGCCATGCCTCCACATTCCCCGAGTCTTA
TTGCTCCCCGAGTCTTAGAAGTGGACTCAGAAAGGCCGGTGACTTGCACGTTGGATGGACTGTTTCCTGC
CCCAGAAGCCGGGGTTTACCTCTCTCTGGGAGATCAGAGGCTCAATCCTAATGTGACCCTCGATGGGGAC
AGCCTTGTGGCCACTGCCACAGCTACAGCAAGCGCAGAACAGGAAGGCACCAAACAGCTGATGTGCGTCG
TGACCCTCGGGGGCGAAAGCAGGGAGACCCAGGAAAACCTGACTGTTTACAGCTTCCCGACTCCTCTTCT
GACTTTGAGTGAGCCAGAAGCCCCCGAGGGAAAAATGGTGACCATAAGCTGCTGGGCAGGGGCTCGAGCC
CTTGTCACCCTGGAGGGAATTCCAGCTGCGGTCCCGGGGCAGCCCGCTGAGCTCCAGTTAAATGTTACAA
AGAACGATGACAAGCGGGGCTTCTTCTGCGACGCCGCCCTCGATGTGGACGGGGAAACTCTAAGAAAAAA
CCAGAGCTCTGAGCTTCGTGTCCTGTATGCACCTCGCCTGGATGACTTGGATTGTCCCAGAAGCTGGACG
TGGCCAGAGGGTCCAGAGCAGACCCTCCACTGCGAGGCCCGCGGAAACCCTGAGCCCTCGGTGCACTGTG
CAAGGCCTGAGGGCGGGGCGGTGCTAGCGCTGGGCCTATTGGGTCCAGTGACCCGTGCCCTCGCAGGCAC
TTACCGATGCACAGCAGTCAATGGGCAAGGCCAGGCGGTCAAAGATGTGACCCTGACCGTGGAATATGCC
CCAGCGCTGGACAGTGTAGGCTGCCCAGAACATATTACTTGGCTGGAGGGAACGGAGGCATCGCTTAGCT
GTGTGGCACACGGGGTCCCACCACCTAGCGTGAGTTGTGTGCGCTCTGGAAAGGAGGAAGTCATGGAAGG
GCCTCTGCGCGTGGCCCGGGAGCACGCCGGCACTTACCGATGCGAAGCCATCAACGCCAGAGGATCAGCG
GCCAAAAATGTGGCCGTCACGGTGGAATATGGTCCCAGTTTTGAGGAGTTGGGCTGCCCCAGCAACTGGA
CGTGGGTAGAGGGATCTGGAAAGCTGTTTTCCTGTGAAGTTGATGGGAAGCCAGAACCACGTGTGGAGTG
CGTAGGCTCGGAGGGTGCAAGCGAAGGGATAGTGTTGCCCTTGGTGTCCTCAAACTCTGGTCCTAGAAAC
TCTATGACCCCTGGTAACCTGTCACCGGGCATTTACCTCTGCAACGCCACCAACCGGCACGGCTCCACAG
TCAAAACAGTCGTCGTGAGCGCGGAGTCGCCGCCACAGATGGATGAATCCAGTTGCCCGAGTCACCAGAC
CTGGCTGGAAGGAGCTGAGGCTACCGCGCTGGCCTGCAGTGCCAGGGGCCGCCCCTCTCCACGGGTGCAT
TGCTCCAGGGAGGGTGCCGCCAGGCTGGAGAGGCTACAGGTGTCCCGAGAGGATGCGGGGACCTACCGCT
GTGTGGCCACCAATGCGCATGGCACGGATTCACGGACGGTCACTGTGGGTGTGGAATACCGGCCTGTGGT
GGCTGAGCTGGCAGCCTCGCCCCCAAGCGTGCGGCCGGGCGGTAACTTCACTCTGACCTGCCGCGCAGAG
GCTTGGCCTCCAGCCCAGATCAGCTGGCGCGCGCCCCCGGGGGCTCTCAACCTCGGCCTCTCCAGCAACA
ATAGCACTCTGAGCGTGGCGGGAGCCATGGGCAGCCATGGCGGCGAGTATGAGTGTGCAGCGACCAATGC
GCATGGGCGCCACGCACGGCGCATCACAGTGCGCGTGGCCGGTCCATGGCTGTGGGTCGCTGTGGGCGGT
GCGGCAGGGGGCGCGGCGCTGCTGGCCGCTGGGGCCGGCCTGGCCTTCTACGTGCAATCCACCGCTTGCA
AGAAGGGCGAGTACAACGTCCAGGAGGCTGAGAGCTCAGGCGAGGCCGTGTGTCTCAATGGCGCGGGCGG
GACACCGGGTGCAGAAGGCGGAGCAGAGACCCCAGGCACTGCAGAGTCACCTGCAGATGGCGAGGTTTTC
GCTATCCAGCTGACATCTTCCTGA

Translation (917 aa):
MPGPSPGLRRALLGLWAALGLGILGISAVALEPFWADLQPRVALVERGGSLWLNCSTNCPRPERGGLETS
LRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQRPDRVELVPLPSWQPVGENFTL
SCRVPGAGPRASLTLTLLRGGQELIRRSFVGEPPRARGAMLTARVLARREDHRVNFSCLAELDLRPHGLG
LFANSSAPRQLRTFAMPPHSPSLIAPRVLEVDSERPVTCTLDGLFPAPEAGVYLSLGDQRLNPNVTLDGD
SLVATATATASAEQEGTKQLMCVVTLGGESRETQENLTVYSFPTPLLTLSEPEAPEGKMVTISCWAGARA
LVTLEGIPAAVPGQPAELQLNVTKNDDKRGFFCDAALDVDGETLRKNQSSELRVLYAPRLDDLDCPRSWT
WPEGPEQTLHCEARGNPEPSVHCARPEGGAVLALGLLGPVTRALAGTYRCTAVNGQGQAVKDVTLTVEYA
PALDSVGCPEHITWLEGTEASLSCVAHGVPPPSVSCVRSGKEEVMEGPLRVAREHAGTYRCEAINARGSA
AKNVAVTVEYGPSFEELGCPSNWTWVEGSGKLFSCEVDGKPEPRVECVGSEGASEGIVLPLVSSNSGPRN
SMTPGNLSPGIYLCNATNRHGSTVKTVVVSAESPPQMDESSCPSHQTWLEGAEATALACSARGRPSPRVH
CSREGAARLERLQVSREDAGTYRCVATNAHGTDSRTVTVGVEYRPVVAELAASPPSVRPGGNFTLTCRAE
AWPPAQISWRAPPGALNLGLSSNNSTLSVAGAMGSHGGEYECAATNAHGRHARRITVRVAGPWLWVAVGG
AAGGAALLAAGAGLAFYVQSTACKKGEYNVQEAESSGEAVCLNGAGGTPGAEGGAETPGTAESPADGEVF
AIQLTSS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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