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Report for CCDS22757.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22757.1 Public Mus musculus 8 Tubb3 23 108 98 CCDS HistoryNCBI Gene:22152Re-query CCDS DB by CCDS ID:22757.1Re-query CCDS DB by GeneID:22152See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22757.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071134.3 ENSMUSP00000071134.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071134.3Link to Ensembl Protein Viewer:ENSMUSP00000071134.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000071134Re-query CCDS DB by Protein ID:ENSMUSP00000071134
Original member Current member NCBI NM_023279.3 NP_075768.1 Accepted alive Link to Nucleotide Sequence:NM_023279.3Link to Protein Sequence:NP_075768.1Re-query CCDS DB by Nucleotide ID:NM_023279Re-query CCDS DB by Protein ID:NP_075768Link to BLAST:NP_075768.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_075768.1 450 Q9ERD7 450 100% 0 0

Chromosomal Locations for CCDS 22757.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 123411606 123411662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123418093 123418201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123418940 123419050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 123420607 123421682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1353 nt):
ATGAGGGAGATCGTGCACATCCAGGCCGGCCAGTGCGGCAACCAGATAGGGGCCAAGTTCTGGGAGGTCA
TCAGCGATGAGCACGGCATAGACCCCAGCGGCAACTATGTAGGGGACTCAGACCTGCAGCTGGAGCGCAT
CAGCGTATACTACAATGAGGCCTCCTCTCACAAGTATGTGCCCAGGGCCATTCTGGTGGACTTGGAACCT
GGAACCATGGACAGTGTTCGGTCTGGCGCCTTTGGACACCTATTCAGGCCCGACAACTTTATCTTTGGTC
AGAGTGGTGCTGGCAACAACTGGGCCAAAGGGCACTATACGGAGGGCGCGGAGCTGGTGGACTCAGTCCT
AGATGTCGTGCGGAAAGAGTGTGAGAATTGTGACTGCCTGCAGGGCTTCCAGCTGACACACTCACTGGGT
GGGGGCACAGGCTCAGGCATGGGCACACTGCTCATCAGCAAGGTGCGTGAGGAGTACCCCGACCGCATCA
TGAACACCTTCAGCGTGGTGCCTTCACCCAAAGTGTCGGACACTGTGGTGGAGCCCTACAACGCCACCCT
GTCCATCCACCAGCTAGTGGAGAACACAGACGAGACCTACTGCATCGACAATGAAGCCCTCTACGACATC
TGCTTCCGCACCCTCAAGCTGGCCACACCCACCTATGGGGACCTCAACCACCTTGTGTCTGCCACCATGA
GTGGAGTCACCACCTCCCTTCGATTCCCTGGTCAGCTCAATGCCGACCTCCGCAAGCTGGCTGTGAACAT
GGTGCCGTTCCCACGTCTCCACTTCTTCATGCCCGGCTTCGCCCCACTTACAGCCCGGGGCAGCCAGCAG
TACCGTGCCCTGACGGTGCCTGAGCTCACGCAGCAGATGTTCGATGCCAAGAACATGATGGCTGCCTGTG
ACCCGCGCCACGGTCGCTACCTGACCGTGGCCACTGTCTTCCGTGGGCGCATGTCTATGAAGGAGGTGGA
CGAGCAGATGCTGGCCATCCAGAGTAAGAACAGCAGCTACTTCGTGGAGTGGATCCCCAACAACGTCAAG
GTAGCCGTGTGTGACATCCCACCCCGTGGGCTCAAAATGTCATCCACCTTCATTGGCAACAGCACGGCCA
TCCAGGAGCTGTTCAAACGCATCTCGGAGCAGTTCACAGCCATGTTCCGGCGCAAGGCCTTCCTGCACTG
GTACACGGGCGAGGGCATGGATGAGATGGAGTTCACCGAGGCCGAGAGCAACATGAATGACCTGGTGTCC
GAGTACCAGCAGTACCAGGACGCCACTGCGGAGGAGGAGGGGGAGATGTATGAAGATGATGACGAGGAAT
CGGAAGCCCAGGGGCCCAAGTGA

Translation (450 aa):
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEP
GTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLG
GGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDI
CFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQ
YRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVK
VAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEMYEDDDEESEAQGPK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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