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Report for CCDS22671.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22671.1 Public Mus musculus 8 Glg1 23 108 98 CCDS HistoryNCBI Gene:20340Re-query CCDS DB by CCDS ID:22671.1Re-query CCDS DB by GeneID:20340See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22671.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000169020.7 ENSMUSP00000131355.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000169020.7Link to Ensembl Protein Viewer:ENSMUSP00000131355.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000169020Re-query CCDS DB by Protein ID:ENSMUSP00000131355
Original member Current member NCBI NM_009149.3 NP_033175.1 Accepted alive Link to Nucleotide Sequence:NM_009149.3Link to Protein Sequence:NP_033175.1Re-query CCDS DB by Nucleotide ID:NM_009149Re-query CCDS DB by Protein ID:NP_033175Link to BLAST:NP_033175.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033175.1 1175 Q61543 1175 100% 0 0

Chromosomal Locations for CCDS 22671.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 111157894 111158061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111159799 111159905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111160621 111160741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111161426 111161533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111162367 111162468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111162638 111162780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111163771 111163894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111165557 111165694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111168661 111168753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111169488 111169605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111171230 111171318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111172415 111172528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111173202 111173264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111174234 111174320 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111177645 111177782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111178833 111178986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111180935 111181036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111182531 111182652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111187714 111187928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111188667 111188850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111191190 111191261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111192524 111192727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111197593 111197808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111200136 111200222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111201526 111201558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 111258771 111259196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3528 nt):
ATGGCGGTGTGTGGACGTGTACGGGGGATGTTCCGCTTGTCGGCGGCGTTGCCGCTGCTGCTGCTCGCGG
CAGCAGGGGCCCAGAATGGTCACGGTCAGGGCCAGGGTCCGGGGACCAACTTTGGGCCCTTCCCAGGGCA
AGGTGGAGGCGGCAGCCCGGCCGGCCAACAGCCGCCTCAGCAGCCTCAGTTATCGCAGCAGCAGCAGCAG
CCGCCGCCTCAGCAGCAGCAGCAGCAACAGCAGCAGTCGCTTTTCGCGGCGGGCGGGCTCCCGGCCCGGC
GGGGCGGAGCGGGGCCCGGTGGGACTGGCGGAGGCTGGAAGCTGGCGGAGGAAGAGTCCTGCCGGGAGGA
CGTGACCCGTGTGTGCCCCAAACACACCTGGAGCAACAACCTGGCGGTGCTCGAGTGCCTGCAGGACGTG
AGGGAGCCCGAGAACGAGATTTCTTCAGACTGCAATCATTTGTTGTGGAATTACAAGCTGAACCTGACTA
CTGATCCCAAATTTGAATCTGTGGCCAGGGAGGTTTGCAAGTCAACTATTTCCGAGATTAAAGAATGTGC
GGAAGAACCAGTTGGAAAAGGTTACATGGTTTCCTGCTTGGTGGATCATCGAGGCAACATCACTGAGTAT
CAGTGTCATCAATACATTACCAAGATGACGGCCATCATTTTCAGTGATTATCGCTTGATCTGCGGCTTCA
TGGATGACTGCAAAAATGATATCAACCTCTTGAAATGTGGCAGCATTCGTCTTGGGGAAAAGGATGCACA
TTCACAAGGTGAGGTGGTATCATGTTTGGAAAAAGGCCTGGTAAAAGAGGCAGAAGAAAAAGAGCCGAAG
ATTCAAGTCTCAGAACTCTGCAAGAAAGCCATTCTTAGGGTGGCTGAGCTGTCCTCGGATGACTTTCATT
TAGACCGGCATTTGTATTTTGCTTGCCGAGATGATCGGGAGCGCTTTTGCGAGAATACACAAGCTGGTGA
AGGAAGAGTGTATAAATGCCTATTTAACCATAAGTTTGAAGAATCCATGAGTGAAAAGTGTAGAGAAGCA
CTAACTACACGCCAGAAGCTCATTGCCCAGGATTATAAAGTCAGTTACTCATTAGCCAAATCCTGTAAGA
GTGACTTGAAAAAATACCGGTGCAATGTGGAAAACCTTCCTCGGTCCCGGGAAGCCAGGCTCTCCTACCT
TCTGATGTGCCTGGAGTCAGCAGTGCACAGAGGGCGGCAGGTGAGCAGTGAGTGCCAAGGTGAGATGCTG
GATTACCGACGCATGCTGATGGAAGACTTCTCTCTGAGCCCCGAGATCATCCTGAGCTGTCGAGGGGAGA
TTGAACACCATTGTTCTGGATTACATCGGAAAGGGCGAACCCTCCACTGTCTGATGAAAGTGGTTCGGGG
TGAAAAGGGGAACCTTGGAATGAACTGCCAACAGGCGCTTCAGACACTGATTCAGGAGACTGACCCTGGT
GCAGACTACCGCATTGATCGAGCTTTGAATGAAGCTTGTGAGTCTGTAATACAGACAGCCTGCAAACACA
TACGATCCGGAGACCCAATGATTCTCTCATGTCTGATGGAGCATTTATACACAGAGAAGATGGTGGAAGA
CTGTGAACACCGGCTCTTAGAGCTACAGTATTTTATCTCTCGGGATTGGAAGTTGGACCCTGTTTTATAC
CGAAAATGCCAGGGAGATGCTTCCCGCCTTTGCCATACCCATGGTTGGAATGAGACCAGTGAACTTATGC
CCCCTGGAGCTGTGTTTTCTTGCCTATACAGACATGCCTACCGCACAGAAGAGCAAGGAAGGAGGCTCTC
ACGAGAATGTCGAGCTGAAGTCCAGAGGATCCTGCACCAGCGAGCCATGGATGTTAAGCTGGATCCTGCC
CTCCAGGACAAGTGCCTCATAGACCTAGGGAAGTGGTGCAGTGAGAAGACGGAGACTGGGCAGGAGCTTG
AGTGCCTTCAGGACCATCTCGATGACTTAGCTGTGGAATGCAGAGACATCGTGGGCAACCTCACCGAGTT
AGAGTCCGAGGATATACAAATAGAAGCTTTGCTGATGAGAGCCTGTGAGCCTATCATTCAGAACTTTTGC
CACGATGTGGCAGACAACCAGATCGACTCTGGGGACCTGATGGAGTGTCTGATCCAGAACAAGCACCAGA
AGGACATGAACGAGAAGTGTGCCATTGGCGTCACTCACTTCCAGCTGGTACAGATGAAGGATTTTCGATT
CTCTTACAAGTTCAAAATGGCCTGCAAGGAGGATGTGTTAAAGCTTTGCCCCAACATAAAAAAGAAGGTG
GACGTAGTGATCTGCCTGAGCACCACTGTGCGCAACGACACTCTGCAGGAGGCCAAGGAGCACCGAGTAT
CACTCAAGTGCCGCAAGCAGCTTCGTGTGGAAGAGCTGGAGATGACAGAGGACATCCGTTTGGAACCAGA
TCTGTATGAAGCCTGCAAGAGTGACATCAAGAACTACTGTTCTACAGTGCAATATGGAAATGCTCAGATT
ATTGAATGTCTAAAAGAAAACAAGAAGCAGCTGAGTACCCGTTGCCACCAGAAAGTATTTAAGCTGCAGG
AGACGGAGATGATGGACCCAGAGCTAGACTATACTCTGATGAGAGTCTGCAAGCAGATGATTAAGCGGTT
CTGTCCAGAAGCAGATTCTAAAACTATGTTGCAGTGTTTAAAACAAAATAAGAACAGTGAATTGATGGAT
CCCAAATGCAAACAGATGATAACCAAGCGCCAGATCACCCAGAACACAGATTACCGCTTAAACCCTGTGC
TAAGGAAGGCCTGTAAAGCTGACATTCCTAAGTTCTGTCATGGCATCCTGACCAAGGCTAAGGACGATTC
AGAGCTAGAAGGCCAAGTTATCTCATGCCTCAAGCTGAGATATGCTGACCAGCGCCTGTCCTCAGACTGT
GAGGACCAGATCCGTATCATCATCCAGGAGTCTGCTCTGGATTACCGCCTGGACCCTCAGCTCCAGCTGC
ACTGCTCAGATGAGATTGCCAATCTATGTGCTGAAGAAGCAGCAGCCCAGGAGCAAACAGGCCAAGTGGA
AGAGTGCCTGAAGGTCAACCTGCTCAAGATCAAGACAGAGCTGTGTAAAAAGGAAGTGTTAAACATGTTG
AAGGAAAGCAAAGCAGACATCTTTGTGGACCCCGTTCTTCACACAGCATGTGCCTTGGACATTAAACACC
ACTGTGCAGCCATCACCCCTGGCCGCGGGCGTCAGATGTCCTGCCTGATGGAGGCCCTGGAAGATAAGCG
AGTGAGATTGCAGCCAGAGTGCAAAAAGCGCCTCAATGACCGGATTGAGATGTGGAGTTATGCAGCCAAG
GTGGCTCCAGCAGATGGCTTCTCTGATCTTGCCATGCAAGTGATGACATCTCCCTCAAAGAACTACATCC
TGTCTGTGATCAGCGGGAGCATCTGCATACTCTTCCTGATTGGCCTGATGTGTGGACGGATCACCAAGAG
AGTGACACGAGAGCTGAAGGACAGGTAG

Translation (1175 aa):
MAVCGRVRGMFRLSAALPLLLLAAAGAQNGHGQGQGPGTNFGPFPGQGGGGSPAGQQPPQQPQLSQQQQQ
PPPQQQQQQQQQSLFAAGGLPARRGGAGPGGTGGGWKLAEEESCREDVTRVCPKHTWSNNLAVLECLQDV
REPENEISSDCNHLLWNYKLNLTTDPKFESVAREVCKSTISEIKECAEEPVGKGYMVSCLVDHRGNITEY
QCHQYITKMTAIIFSDYRLICGFMDDCKNDINLLKCGSIRLGEKDAHSQGEVVSCLEKGLVKEAEEKEPK
IQVSELCKKAILRVAELSSDDFHLDRHLYFACRDDRERFCENTQAGEGRVYKCLFNHKFEESMSEKCREA
LTTRQKLIAQDYKVSYSLAKSCKSDLKKYRCNVENLPRSREARLSYLLMCLESAVHRGRQVSSECQGEML
DYRRMLMEDFSLSPEIILSCRGEIEHHCSGLHRKGRTLHCLMKVVRGEKGNLGMNCQQALQTLIQETDPG
ADYRIDRALNEACESVIQTACKHIRSGDPMILSCLMEHLYTEKMVEDCEHRLLELQYFISRDWKLDPVLY
RKCQGDASRLCHTHGWNETSELMPPGAVFSCLYRHAYRTEEQGRRLSRECRAEVQRILHQRAMDVKLDPA
LQDKCLIDLGKWCSEKTETGQELECLQDHLDDLAVECRDIVGNLTELESEDIQIEALLMRACEPIIQNFC
HDVADNQIDSGDLMECLIQNKHQKDMNEKCAIGVTHFQLVQMKDFRFSYKFKMACKEDVLKLCPNIKKKV
DVVICLSTTVRNDTLQEAKEHRVSLKCRKQLRVEELEMTEDIRLEPDLYEACKSDIKNYCSTVQYGNAQI
IECLKENKKQLSTRCHQKVFKLQETEMMDPELDYTLMRVCKQMIKRFCPEADSKTMLQCLKQNKNSELMD
PKCKQMITKRQITQNTDYRLNPVLRKACKADIPKFCHGILTKAKDDSELEGQVISCLKLRYADQRLSSDC
EDQIRIIIQESALDYRLDPQLQLHCSDEIANLCAEEAAAQEQTGQVEECLKVNLLKIKTELCKKEVLNML
KESKADIFVDPVLHTACALDIKHHCAAITPGRGRQMSCLMEALEDKRVRLQPECKKRLNDRIEMWSYAAK
VAPADGFSDLAMQVMTSPSKNYILSVISGSICILFLIGLMCGRITKRVTRELKDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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