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Report for CCDS22381.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22381.1 Public Mus musculus 8 Pik3r2 23 108 98 CCDS HistoryNCBI Gene:18709Re-query CCDS DB by CCDS ID:22381.1Re-query CCDS DB by GeneID:18709See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22381.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034296.14 ENSMUSP00000034296.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034296.14Link to Ensembl Protein Viewer:ENSMUSP00000034296.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000034296Re-query CCDS DB by Protein ID:ENSMUSP00000034296
Original member Current member NCBI NM_008841.3 NP_032867.2 Accepted alive Link to Nucleotide Sequence:NM_008841.3Link to Protein Sequence:NP_032867.2Re-query CCDS DB by Nucleotide ID:NM_008841Re-query CCDS DB by Protein ID:NP_032867Link to BLAST:NP_032867.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032867.2 722 O08908 722 100% 0 0

Chromosomal Locations for CCDS 22381.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 70768690 70768897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70769062 70769232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70769348 70769419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70769589 70769765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70769905 70770047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70770377 70770502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70770584 70770764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70770847 70770945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70771054 70771162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70771289 70771374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70771833 70772031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70772133 70772264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70772352 70772402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70772603 70772695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 70774656 70774977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2169 nt):
ATGGCAGGAGCCGAGGGCTTCCAGTACAGGGCTGTGTACCCATTCCGCCGGGAGCGGCCTGAAGACCTGG
AGCTGCTCCCTGGGGACCTCCTGGTGGTGAGCCGGGTGGCCCTACAGGCACTTGGTGTGGCTGATGGAGG
AGAGCGCTGCCCACACAATGTGGGCTGGATGCCTGGCTTCAACGAGCGCACCCGACAGCGAGGGGACTTC
CCCGGGACATACGTGGAGTTCCTAGGACCCGTGGCTCTGGCTCGACCAGGCCCTCGCCCACGGGGGCCCC
GTCCGTTGCCCGCCAGGCCCTTGGATGGATCTTCTGAGTCAGGCCACATACTCCCAGACCTGGCAGAGCA
GTTCTCCCCACCTGACCCTGCTCCCCCGATTCTGGTGAAGCTGGTGGAAGCCATTGAGCAAGCAGAGCTG
GACAGTGAATGCTACAGTAAGCCGGAGCTGCCCGCAACACGGACAGACTGGTCCCTGAGTGACTTGGAGC
AGTGGGACCGCACCGCCTTGTATGATGCTGTTAAGGGCTTCCTGCTGGCGTTGCCTGCAGCTGTGGTGAC
CCCTGAAGCTGCAGCAGAGGCGTACCGGGCACTTCGAGAGGTTGCAGGCCCCGTGGGGCTGGTGCTGGAA
CCCCCAACACTGCCGCTGCACCAGGCTCTCACACTGCGTTTCCTGCTGCAACACCTGGGTCGTGTGGCCC
GCAGAGCACCCTCGCCAGATACAGCTGTCCATGCACTGGCCAGTGCCTTCGGGCCGCTACTGCTGCGCAT
ACCTCCGTCAGGGGGCGAGGGTGATGGGAGTGAGCCTGTACCCGACTTCCCTGTGCTGCTGCTAGAGAGG
CTGGTGCAGGAGCATGTGGAGGAGCAAGACGCTGCCCCCCCAGCGCTACCACCTAAGCCCTCTAAGGCAA
AGCCGGCACCCACAGCTCTGGCCAATGGAGGGAGCCCGCCCTCGCTTCAGGATGCAGAGTGGTACTGGGG
GGACATCTCCAGGGAAGAGGTGAATGAGAGACTCCGGGACACACCTGATGGTACCTTCTTAGTCAGAGAT
GCATCCAGCAAGATCCAAGGAGAGTACACGCTCACCCTCAGGAAAGGCGGGAACAACAAGTTGATCAAAG
TCTTCCACCGGGATGGTCACTATGGCTTCTCAGAGCCCCTTACCTTCTGCTCCGTGGTGGAACTCATCTC
CCACTACCGCCACGAATCACTGGCCCAGTACAACGCCAAGCTGGACACACGCCTTCTCTACCCTGTGTCC
AAGTACCAACAAGACCAGGTGGTGAAGGAGGACAGCATAGAGGCTGTGGGCGCCCAGCTCAAGGTCTACC
ACCAGCAGTACCAGGACAAGAGCCGCGAATATGACCAGCTGTATGAAGAATACACACGGACCTCCCAGGA
GCTGCAGATGAAGCGCACAGCCATAGAGGCCTTCAACGAGACCATCAAGATCTTCGAAGAGCAGGGCCAG
ACACAGGAGAAATGCAGCAAGGAGTATTTGGAGCGCTTCCGGCGAGAGGGAAATGAGAAGGAGATGCAGA
GGATCCTGCTGAACTCCGAGCGACTCAAGTCTCGCATCGCGGAGATACACGAAAGCCGCACGAAGTTGGA
GCAGGATCTGCGGGCGCAGGCCTCCGACAACCGTGAGATCGACAAGCGCATGAACAGCCTCAAACCTGAC
CTCATGCAGCTGCGCAAGATCAGGGACCAGTACCTCGTGTGGCTCACCCAGAAAGGTGCCCGACAGAGGA
AGATCAACGAATGGCTGGGAATCAAGAACGAGACTGAGGACCAGTATTCACTGATGGAGGATGAGGACGC
CCTCCCCCACCACGAGGAGCGCACGTGGTACGTGGGCAAGATCAACCGCACACAGGCGGAGGAGATGCTG
AGTGGCAAACGAGACGGGACCTTCCTCATCCGGGAGAGCAGCCAGCGGGGCTGTTACGCATGCTCCGTGG
TGGTGGACGGCGACACGAAGCACTGTGTCATCTACCGCACAGCCACCGGCTTCGGCTTCGCAGAGCCCTA
TAACCTGTACGGGTCCCTGAAGGAGCTGGTGCTGCACTACCAGCACGCATCACTCGTGCAGCACAATGAC
GCACTTACCGTCACCCTCGCACACCCTGTGCGTGCCCCCGGGCCTGGCCCACCGTCTGCAGCACGCTGA

Translation (722 aa):
MAGAEGFQYRAVYPFRRERPEDLELLPGDLLVVSRVALQALGVADGGERCPHNVGWMPGFNERTRQRGDF
PGTYVEFLGPVALARPGPRPRGPRPLPARPLDGSSESGHILPDLAEQFSPPDPAPPILVKLVEAIEQAEL
DSECYSKPELPATRTDWSLSDLEQWDRTALYDAVKGFLLALPAAVVTPEAAAEAYRALREVAGPVGLVLE
PPTLPLHQALTLRFLLQHLGRVARRAPSPDTAVHALASAFGPLLLRIPPSGGEGDGSEPVPDFPVLLLER
LVQEHVEEQDAAPPALPPKPSKAKPAPTALANGGSPPSLQDAEWYWGDISREEVNERLRDTPDGTFLVRD
ASSKIQGEYTLTLRKGGNNKLIKVFHRDGHYGFSEPLTFCSVVELISHYRHESLAQYNAKLDTRLLYPVS
KYQQDQVVKEDSIEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQ
TQEKCSKEYLERFRREGNEKEMQRILLNSERLKSRIAEIHESRTKLEQDLRAQASDNREIDKRMNSLKPD
LMQLRKIRDQYLVWLTQKGARQRKINEWLGIKNETEDQYSLMEDEDALPHHEERTWYVGKINRTQAEEML
SGKRDGTFLIRESSQRGCYACSVVVDGDTKHCVIYRTATGFGFAEPYNLYGSLKELVLHYQHASLVQHND
ALTVTLAHPVRAPGPGPPSAAR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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