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Report for CCDS21985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21985.1 Public Mus musculus 7 Cyp2e1 23 108 98 CCDS HistoryNCBI Gene:13106Re-query CCDS DB by CCDS ID:21985.1Re-query CCDS DB by GeneID:13106See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21985.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026552.8 ENSMUSP00000026552.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026552.8Link to Ensembl Protein Viewer:ENSMUSP00000026552.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000026552Re-query CCDS DB by Protein ID:ENSMUSP00000026552
Original member Current member NCBI NM_021282.3 NP_067257.1 Accepted alive Link to Nucleotide Sequence:NM_021282.3Link to Protein Sequence:NP_067257.1Re-query CCDS DB by Nucleotide ID:NM_021282Re-query CCDS DB by Protein ID:NP_067257Link to BLAST:NP_067257.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067257.1 493 Q05421 493 100% 0 0

Chromosomal Locations for CCDS 21985.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140763851 140764027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140764800 140764959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140769096 140769245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140769564 140769724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140770052 140770228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140770942 140771083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140773019 140773206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140773630 140773771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140774558 140774742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGGCGGTTCTTGGCATCACCGTTGCCTTGCTTGTCTGGATCGCCACCCTCCTCCTCGTATCCATCTGGA
AACAGATCTATAGAAGTTGGAACCTGCCCCCAGGACCTTTCCCAATTCCTTTCTTTGGAAACATTTTTCA
GCTGGATTTGAAGGATATTCCCAAGTCTTTAACCAAGTTGGCAAAGCGCTTCGGGCCAGTGTTCACACTG
CACCTGGGTCAGAGGCGCATCGTGGTCCTGCATGGCTACAAGGCTGTCAAGGAGGTGCTACTGAACCACA
AGAATGAGTTCTCTGGCCGAGGGGACATTCCTGTGTTCCAGGAGTACAAGAACAAGGGGATTATTTTCAA
TAATGGACCCACATGGAAGGACGTGCGGAGGTTTTCCCTAAGTATCCTCCGTGACTGGGGAATGGGGAAA
CAGGGTAATGAGGCCCGCATCCAAAGAGAGGCACACTTCCTGGTGGAGGAGCTCAAAAAGACCAAAGGCC
AGCCTTTTGACCCTACCTTTCTGATTGGCTGTGCACCCTGCAATGTCATTGCGGATATTCTCTTCAACAA
ACGCTTCGATTACGATGACAAGAAGTGTCTGGAGCTCATGAGTTTGTTCAATGAAAACTTCTACCTGCTG
AGTACTCCCTGGATCCAGGCTTACAATTACTTTTCGGATTATCTACAATATCTACCTGGAAGCCACAGAA
AAGTCATGAAAAATGTGTCTGAAATAAGACAGTACACACTTGGAAAAGCCAAGGAACACCTTAAGTCACT
GGACATCAACTGCCCCCGGGATGTGACTGACTGTCTCCTCATAGAGATGGAGAAGGAAAAACACAGCCAA
GAACCCATGTACACAATGGAAAATATTTCTGTGACTTTGGCCGACCTGTTCTTTGCAGGAACAGAGACCA
CCAGCACAACTCTGAGATATGGGCTCCTGATTCTCATGAAATACCCAGAAATTGAAGAGAAACTTCATGA
AGAAATTGACAGGGTTATTGGGCCAAGCCGTGCCCCTGCAGTCCGAGACAGGATGAATATGCCCTACATG
GACGCTGTAGTGCATGAGATTCAGAGATTCATCAACCTCGTCCCTTCCAACCTGCCCCACGAAGCAACCC
GAGACACCGTGTTCCGAGGATATGTCATCCCCAAGGGTACAGTTGTAATTCCAACTCTGGACTCCCTTTT
ATTTGACAACTATGAGTTTCCAGATCCAGAGACATTTAAACCTGAGCATTTTCTGAATGAAAATGGGAAG
TTCAAGTACAGTGACTATTTCAAGGCGTTTTCTGCAGGAAAGCGCGTGTGTGTTGGAGAAGGCCTGGCCC
GCATGGAACTGTTTCTGCTTTTGTCTGCTATTCTGCAGCATTTTAATCTGAAGTCTCTGGTTGACCCTAA
GGATATCGACCTCAGCCCTGTTACAATTGGCTTTGGCAGTATCCCACGCGAATTTAAACTCTGTGTCATT
CCTCGTTCATGA

Translation (493 aa):
MAVLGITVALLVWIATLLLVSIWKQIYRSWNLPPGPFPIPFFGNIFQLDLKDIPKSLTKLAKRFGPVFTL
HLGQRRIVVLHGYKAVKEVLLNHKNEFSGRGDIPVFQEYKNKGIIFNNGPTWKDVRRFSLSILRDWGMGK
QGNEARIQREAHFLVEELKKTKGQPFDPTFLIGCAPCNVIADILFNKRFDYDDKKCLELMSLFNENFYLL
STPWIQAYNYFSDYLQYLPGSHRKVMKNVSEIRQYTLGKAKEHLKSLDINCPRDVTDCLLIEMEKEKHSQ
EPMYTMENISVTLADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRAPAVRDRMNMPYM
DAVVHEIQRFINLVPSNLPHEATRDTVFRGYVIPKGTVVIPTLDSLLFDNYEFPDPETFKPEHFLNENGK
FKYSDYFKAFSAGKRVCVGEGLARMELFLLLSAILQHFNLKSLVDPKDIDLSPVTIGFGSIPREFKLCVI
PRS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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