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Report for CCDS21935.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21935.1 Public Mus musculus 7 Bccip 23 108 98 CCDS HistoryNCBI Gene:66165Re-query CCDS DB by CCDS ID:21935.1Re-query CCDS DB by GeneID:66165See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21935.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033282.4 ENSMUSP00000033282.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033282.4Link to Ensembl Protein Viewer:ENSMUSP00000033282.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000033282Re-query CCDS DB by Protein ID:ENSMUSP00000033282
Original member Current member NCBI NM_025392.2 NP_079668.2 Accepted alive Link to Nucleotide Sequence:NM_025392.2Link to Protein Sequence:NP_079668.2Re-query CCDS DB by Nucleotide ID:NM_025392Re-query CCDS DB by Protein ID:NP_079668Link to BLAST:NP_079668.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079668.2 316 Q9CWI3 316 100% 0 0

Chromosomal Locations for CCDS 21935.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 133709358 133709528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133714188 133714262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133714899 133714979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133716861 133716950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133717599 133717786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133719104 133719278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 133720707 133720877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGCATCTAAGGCTAAGAAGCGAGCGGTGGGAAATGGAATTCAGCGGCCGCTGGGAGCCCCGGGCCAGC
GGGAGGAGGAAGAAGAAGAAGAGGATGAGGTGGAGGATGAGGAAGAAGACGAGGACGACAGTGACGAAGA
AGAGGATGAAGTTGACGAAATCGTGGACGAGGAAGTGAATATTGAGTTTGAAGCCTATTCCATCTCAGAT
AACGATTATGGCGGAATTAAGAAATTACTGCAACAGCTTTTTCTAAAAGCCCCCGTGAACACTGCCGAGC
TGACGAATCTCCTGATGCAGCAGAACCACATTGGGAGTGTGATTAAGCAAACAGATGTTTCAGAAGACAG
TGATGATGAAGTGGATGAAGATGAGATCTTTGGCTTCATAAGCCTTTTAAATTTGACTGAAAGAAAGGGG
ACTCAGTGTGCTGAACAAATTAAAGAGTTGGTTCTAAGCTTCTGTGAGAAGACCTGTGAGCAGAGCATGG
TTGAACAGCTGGACAAGCTTTTGAATGACACCAGCAAGCCTGTGGGCCTTCTGCTAAGTGAAAGATTCAT
TAACGTCCCTCCACAGATTGCCCTGCCCATGCACCAGCAGCTCCAGAAAGAACTGTCTGAGGCGCGAAGA
ACCAACAAGCCATGTGGGAAATGCTGCTTCTACCTGCTGATTAGTAAGACATTTATGGAAGCAGGAAAGT
CCAGTTCCAGAAAGAGGCAGGACAGCCTTCAGCAGGGGGCACTGATGTTTGCAAATGCAGAGGAAGAGTT
CTTCTATGAGAAGGCAATCTTGAAGTTCAGCTACTCGGTGCAGGGGGAGAGCGACACTCGTCTGGGAGGC
AGATGGTCCTTCGATGATGTTCCGATGACGCCTTTGCGGACTGTGATGGTAATTCCAGACGACAGGATGA
ATGAGATCATGGAAACCCTGAAAGACCATCTCTCCGTCTAG

Translation (316 aa):
MASKAKKRAVGNGIQRPLGAPGQREEEEEEEDEVEDEEEDEDDSDEEEDEVDEIVDEEVNIEFEAYSISD
NDYGGIKKLLQQLFLKAPVNTAELTNLLMQQNHIGSVIKQTDVSEDSDDEVDEDEIFGFISLLNLTERKG
TQCAEQIKELVLSFCEKTCEQSMVEQLDKLLNDTSKPVGLLLSERFINVPPQIALPMHQQLQKELSEARR
TNKPCGKCCFYLLISKTFMEAGKSSSRKRQDSLQQGALMFANAEEEFFYEKAILKFSYSVQGESDTRLGG
RWSFDDVPMTPLRTVMVIPDDRMNEIMETLKDHLSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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