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Report for CCDS21905.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21905.1 Public Mus musculus 7 Tacc2 23 108 98 CCDS HistoryNCBI Gene:57752Re-query CCDS DB by CCDS ID:21905.1Re-query CCDS DB by GeneID:57752See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21905.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033141.6 ENSMUSP00000033141.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033141.6Link to Ensembl Protein Viewer:ENSMUSP00000033141.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000033141Re-query CCDS DB by Protein ID:ENSMUSP00000033141
Original member Current member NCBI NM_021314.5 NP_067289.2 Accepted alive Link to Nucleotide Sequence:NM_021314.5Link to Protein Sequence:NP_067289.2Re-query CCDS DB by Nucleotide ID:NM_021314Re-query CCDS DB by Protein ID:NP_067289Link to BLAST:NP_067289.2

Chromosomal Locations for CCDS 21905.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 130692920 130692987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130716703 130716839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130728523 130729828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130731531 130731566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130733506 130733566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130734949 130735150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130739812 130739873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130740840 130740955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130742130 130742301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130743544 130743684 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130744527 130744616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130751190 130751333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130751834 130751910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130753618 130753661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759165 130759325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759534 130759640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130759915 130760035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 130764254 130764319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3111 nt):
ATGGGAGGGTCGCAGTCCCTGCAGCCAGCCCCAGCCAGTGACCTGAACCTGGAGGTTTCTGAGGCCATGA
GTTCCGACTCTGAGGAAGCCTTTGAGACCCCCGAGTCAACGACCCCTGTCAAAGCTCCACCAGCCCCTCC
CCCTCCACCCCCTGAAGTCACCCCAGAGCCTGAGGTCATCGATCCACCAGCCCCAGAAGAACCAGGATGC
ATTTCTGAGCCACCGGTTGTGGTTCCCGATGGCCCTCGCAGCAGCGAGTCCGTGGAAGGAAGCCCTTTCC
GTCCTTCCCACTCCTCCTCGGCGGTGTTCGATGAAGACAAGCCGATAGCCAGCAGCGGGACTTACAACTT
AGACTTCGACAGCATCGAGCTGGTGGATAACTTCCAGAGCTTGGAGCCGTGCTCTGCCGACTCTAAGGGT
CAGGAGTGTAAGGTGAGCACGCGGAGGAAATCCACCGAGTCCGTGCCACCCTCCAAGTCCACGCTGTCCC
GTTCGCTTAGCCTACAAGCCAGTGACTTTGACGGTGCTTCTTGCCCCGGCAGCCCTGAAGCTGGGACCCT
TACCACAGATGCATGTGGCACAGGATCCAACAGTGCTTCCAGCACCCTTAAGCGAACTAAAAAAACACGG
CCACCTTCCTTGAAAAAGAAGCAAGCCACCAAGAAACCCACAGAAACCCCCCCAGTGAAGGAGACCCAAC
AGGAACCAGGTGAAGAGAGTCCAGTCCCCAGTGAGGAACACTTAGCACCAGAGACAAAGACGGAGTCGGC
CACACCTGAGGGCGCTGGTTGCACCTTGTCAGACGATACACCCCTGGAGTCCCCTGCTGTCCCCACAGCC
ACCTGTCCTCTGACTTTGGAGAGTGCAGAAGACGTTAGCCCCCTGGTTTCTGGAGGTGGCAGAGTGCAGA
ACTCACCCCCAGTTGGGAGGAAATCAGTGCCTCTTACCACAGCCTCTGAGGCGGTGGAGGTGACCCTGTC
GGACAGTGGGGGGCAAGAGGACTTGCCTGCCAAGGGGTTGTCAGTGAGGCTGGAGTTTGACTATTCTGAG
GACAAGGGAAGTTGGGAGAGTCAGCAGGAAAACGCCCCTCCCACCAAAAAGATAGGCAAGAAGCCAGTTG
CCAAAATGCCCCTAAGGAGGCCAAAGATGAAAAAGACCCCCGAGAAACTTGACAACACTCCTGCCTCACC
TCCAAGGTCCCCTACTGAACCCAGTGACACCCCTATTGCTAAAGGTACCTACACCTTTGATATAGACAAG
TGGGATGACCCCAATTTTAACCCTTTTTCCTCCACCTCAAAAATGCAAGAGTCTCCCAAACTGTCCCAAC
AATCGTACAACTTTGACCCTGACGCCTGTGAAGAGTCCCTTGACCCCTTTAAGGCATCCTCTAAGACCCC
CAGCTCACCTTCTAAGTCCCCAGCCTCTTTTGAGATCCCAGCCAGCACCACGGAAGCGGATGGGGATGGG
TTGAATAAACCTGCCAAGAAGAAGAAGACTCCACTAAAGACGATGGTTGAAGATGTGATGTCTGTGTGTT
CTCTGTTTGACACGTTTAGGGTGAAGAAGTCTCCAAAGCGGTCTCCTCTGTCTGACCCGCCTTCTCAGGA
CCCCACTCCAGCTGCCACGCCGGAAGCACCCTCAGCCATCTCTACAGTGGTCCACGCCACAGATGAGGAG
AAGCTGGCAGTCACTAGCCAGAAGTGGACGTGTATGACGGTGGACTTGGATGCTGACAAACAGGACTTCC
CTCAGCCCTCGGACCTGTCTAACTTTGTAAATGAGACCAAATTCAATTCACCCTCAGAGGAGCTGGACTA
CAGAAACTCCTATGAAATTGAATACATGGAAAAGCTTGGCTCCTCCTTACCTCAGGACGATGACACTCCG
AAGAAGCAGGCCTTGTACCTTATGTTTGACACTCCTCAGGAGAGCCCCGTCAAGTCTCCTCCAGTCCGGA
TGTCAGATTCCCCAACTCCATGTTCAGGGTCGAGTTTTGAGGACACCGAAGCCCTTGTGAATGCAGCAAC
AAAGCTCCAGCATCCAGTCGCAAGAGGTCTGCCCTCCAGTCAGGAGCCTCTCTTGCAGGTGCCTGAGAAG
CCCTCCCAGAAGGAGCTGGAGGCCATGGCCTTGGGCACCCCAGCAGAAGCAATTGAAATCACAGCTCCCG
AGGGTGCCTTTGCTTCTGCAGATACCCTCCTCAGCAGGCTGGCCCATCCCGCCTCTCTCTGTGGTGCACT
TGGCTATCTGGAGCCTGACTTAGCAGAAAAGAACCCCCCAGTATTTGCCCAGAAACTTCAGGAGGAGTTA
GAGTTTGCTGTCATGCGGATAGAAGCCCTGAAGCTGGCCAGGCAGATCGCCCTGGCTTCCCGCAGCCGCC
AGGACACCAAGAGGGAAGCTGCTCACCCACCAGATGTCTCCATCTCCAAAACTGCCTTGTACTCCCGCAT
CGGGTCCACCGAGGTGGAGAAACCCCCAGGCCTTCTGTTCCAGCAGCCAGACCTGGACTCTGCACTCCAG
GTTGCCAGAGCAGAGGTCATCGCCAAGGAGAGAGAAGTCTCAGAGTGGAGGGATAAATATGAAGAAAGCC
GACGGGAAGTGGTGGAAATGAGGAAAATTGTGGCCGAATATGAGAAGACCATTGCACAGATGATCGAGGA
CGAACAGAGAGAAAAATCCATCTCCCACCAAACTGTACAGCAGCTGGTCCTGGAGAAGGAGCAAGCCCTG
GCTGACCTGAACTCTGTGGAAAAGTCTCTGGCTGACCTCTTCAGGAGATACGAAAAGATGAAGGAGGTCC
TGGAAGGTTTTCGAAAGAATGAAGAGGTGTTGAAGAAATGTGCGCAGGAGTACCTATCCCGAGTGAAGAA
AGAGGAACAGAGGTACCAGGCCCTGAAGGTGCACGCCGAAGAGAAACTGGACAGAGCCAATGCAGAGATT
GCCCAGGTTCGCGGCAAGGCCCAGCAAGAGCAAGCAGCCTACCAGGCTAGCCTGCGGAAGGAGCAGCTTC
GAGTGGATGCTCTGGAAAGAACGCTGGAGCAGAAGAATAAAGAGATAGAAGAACTCACCAAGATTTGTGA
CGAGCTGATCGCCAAGATGGGAAAAAGCTAA

Translation (1036 aa):
MGGSQSLQPAPASDLNLEVSEAMSSDSEEAFETPESTTPVKAPPAPPPPPPEVTPEPEVIDPPAPEEPGC
ISEPPVVVPDGPRSSESVEGSPFRPSHSSSAVFDEDKPIASSGTYNLDFDSIELVDNFQSLEPCSADSKG
QECKVSTRRKSTESVPPSKSTLSRSLSLQASDFDGASCPGSPEAGTLTTDACGTGSNSASSTLKRTKKTR
PPSLKKKQATKKPTETPPVKETQQEPGEESPVPSEEHLAPETKTESATPEGAGCTLSDDTPLESPAVPTA
TCPLTLESAEDVSPLVSGGGRVQNSPPVGRKSVPLTTASEAVEVTLSDSGGQEDLPAKGLSVRLEFDYSE
DKGSWESQQENAPPTKKIGKKPVAKMPLRRPKMKKTPEKLDNTPASPPRSPTEPSDTPIAKGTYTFDIDK
WDDPNFNPFSSTSKMQESPKLSQQSYNFDPDACEESLDPFKASSKTPSSPSKSPASFEIPASTTEADGDG
LNKPAKKKKTPLKTMVEDVMSVCSLFDTFRVKKSPKRSPLSDPPSQDPTPAATPEAPSAISTVVHATDEE
KLAVTSQKWTCMTVDLDADKQDFPQPSDLSNFVNETKFNSPSEELDYRNSYEIEYMEKLGSSLPQDDDTP
KKQALYLMFDTPQESPVKSPPVRMSDSPTPCSGSSFEDTEALVNAATKLQHPVARGLPSSQEPLLQVPEK
PSQKELEAMALGTPAEAIEITAPEGAFASADTLLSRLAHPASLCGALGYLEPDLAEKNPPVFAQKLQEEL
EFAVMRIEALKLARQIALASRSRQDTKREAAHPPDVSISKTALYSRIGSTEVEKPPGLLFQQPDLDSALQ
VARAEVIAKEREVSEWRDKYEESRREVVEMRKIVAEYEKTIAQMIEDEQREKSISHQTVQQLVLEKEQAL
ADLNSVEKSLADLFRRYEKMKEVLEGFRKNEEVLKKCAQEYLSRVKKEEQRYQALKVHAEEKLDRANAEI
AQVRGKAQQEQAAYQASLRKEQLRVDALERTLEQKNKEIEELTKICDELIAKMGKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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