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Report for CCDS21786.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21786.1 Public Mus musculus 7 Acsm3 23 108 98 CCDS HistoryNCBI Gene:20216Re-query CCDS DB by CCDS ID:21786.1Re-query CCDS DB by GeneID:20216See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21786.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063770.9 ENSMUSP00000068803.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063770.9Link to Ensembl Protein Viewer:ENSMUSP00000068803.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000063770Re-query CCDS DB by Protein ID:ENSMUSP00000068803
Original member Current member EBI ENSMUST00000106526.1 ENSMUSP00000102136.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106526.1Link to Ensembl Protein Viewer:ENSMUSP00000102136.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106526Re-query CCDS DB by Protein ID:ENSMUSP00000102136
Original member Current member EBI ENSMUST00000106527.7 ENSMUSP00000102137.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106527.7Link to Ensembl Protein Viewer:ENSMUSP00000102137.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106527Re-query CCDS DB by Protein ID:ENSMUSP00000102137
Original member Current member EBI ENSMUST00000106528.7 ENSMUSP00000102138.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106528.7Link to Ensembl Protein Viewer:ENSMUSP00000102138.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106528Re-query CCDS DB by Protein ID:ENSMUSP00000102138
Original member NCBI NM_016870.3 NP_058566.3 Updated not alive Link to Nucleotide Sequence:NM_016870.3Link to Protein Sequence:NP_058566.3Re-query CCDS DB by Nucleotide ID:NM_016870Re-query CCDS DB by Protein ID:NP_058566
Current member NCBI NM_016870.4 NP_058566.3 Accepted alive Link to Nucleotide Sequence:NM_016870.4Link to Protein Sequence:NP_058566.3Re-query CCDS DB by Nucleotide ID:NM_016870Re-query CCDS DB by Protein ID:NP_058566Link to BLAST:NP_058566.3
Original member NCBI NM_212441.2 NP_997606.2 Updated not alive Link to Nucleotide Sequence:NM_212441.2Link to Protein Sequence:NP_997606.2Re-query CCDS DB by Nucleotide ID:NM_212441Re-query CCDS DB by Protein ID:NP_997606
Current member NCBI NM_212441.3 NP_997606.2 Accepted alive Link to Nucleotide Sequence:NM_212441.3Link to Protein Sequence:NP_997606.2Re-query CCDS DB by Nucleotide ID:NM_212441Re-query CCDS DB by Protein ID:NP_997606Link to BLAST:NP_997606.2
Original member NCBI NM_212442.2 NP_997607.2 Updated not alive Link to Nucleotide Sequence:NM_212442.2Link to Protein Sequence:NP_997607.2Re-query CCDS DB by Nucleotide ID:NM_212442Re-query CCDS DB by Protein ID:NP_997607
Current member NCBI NM_212442.3 NP_997607.2 Accepted alive Link to Nucleotide Sequence:NM_212442.3Link to Protein Sequence:NP_997607.2Re-query CCDS DB by Nucleotide ID:NM_212442Re-query CCDS DB by Protein ID:NP_997607Link to BLAST:NP_997607.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058566.3 580 Q3UNX5-1 580 100% 0 0
NP_997606.2 580 Q3UNX5-1 580 100% 0 0
NP_997607.2 580 Q3UNX5-1 580 100% 0 0

Chromosomal Locations for CCDS 21786.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 119767946 119768146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119768764 119768974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119773688 119773895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119774513 119774656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119775091 119775247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119775483 119775562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119777053 119777176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119778379 119778459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119779603 119779704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119780750 119780877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119780968 119781067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119783850 119783969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 119784274 119784360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1743 nt):
ATGGTGATGTTACTCCGTGCTAGGTGTTTTCAGCGCCTAGCAATTCCTGATCCTATGAGAGTCTTGTATA
AAGATTACAGAACAGCGACCCCTCAGAACTTTTCCAACTATGAGTCCATGAAACAAGACTTCAAAATAGA
GATTCCAGAGTATTTCAATTTTGCAAAAGATGTCCTGGACCAATGGACCAATATGGAAAAGGCTGGAAAG
AGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAATGGAGAAGAGCTGAGATGGAGTTTTGAAGAAC
TTGGGTTGTTATCCAGGAAATTTGCCAACATACTCACAGAAGCCTGCTCCCTGCAAAGAGGAGACAGAGT
AATGGTGATACTGCCCAAGATCCCAGAGTGGTGGCTTGCAAATGTGGCCTGTCTGCGAACAGGGACAGTT
TTAATTCCAGGAACCACTCAGCTGACCCAGAAAGACATCCTCTATAGACTACAATCTTCAAAAGCTAAGT
GCATTATTACCGATGATACTTTGGCCCCAGCAGTAGATGCCGTGGCAGCTAAATGTGAAAATCTCCACTC
CAAATTAATTGTGTCTCAGCACTCCAGAGAAGGCTGGGGGAACCTCAAGGAGATGATGAAATATGCCAGT
GACAGCCACACTTGTGTGGACACAAAACACGACGAGATGATGGCCATCTACTTCACCAGTGGGACAACTG
GGCCTCCTAAGATGATTGGACACACCCACAGCAGCTTTGGTTTAGGATTGTCTGTCAATGGAAGGTTCTG
GCTGGATTTGATAGCCTCCGATGTGATGTGGAATACTTCAGATACAGGCTGGGCAAAGTCTGCATGGAGT
AGTGTTTTTTCTCCATGGACCCAAGGAGCATGTGTTTTTGCACACTATTTGCCCCGTTTTGAATCAACTT
CCATCTTGCAAACCCTCTCCAAGTTCCCCATCACTGTCTTCTGTTCTGCACCAACTGCCTACCGGATGCT
TGTTCAGAATGACATGAGCAGCTATAAGTTCAACAGTTTGAAGCACTGTGTCAGTGCTGGAGAACCTATT
AACCCTGAAGTGATGGAACAATGGAGAAAGAAGACGGGCCTAGACATCTATGAAGGATATGGACAGACAG
AAACGGTGCTGATCTGTGGAAATTTCAAGGGGATGAAAATTAAGCCCGGCTCAATGGGAAAGCCTTCTCC
TGCTTTTGATGTGAAGATTTTAGATGAAAATGGTGCCACTCTTCCTCCTGGACAAGAAGGGGATATTGCT
CTTCAAGTTCTTCCTGAGCGACCATTTGGCCTTTTTACTCATTATGTAGATAATCCTTCCAAAACGGCTT
CAACTCTACGAGGGAGTTTCTACATTACTGGGGACAGAGGATATATGGATGAAGATGGCTATTTCTGGTT
TGTTGCAAGATCAGATGATATCATATTATCTTCTGGTTACCGAATTGGACCATTTGAGGTAGAAAGTGCC
CTCATAGAACATCCTTCCATCGCAGAGTCAGCTGTTGTCAGCAGTCCAGACCCCATCAGAGGAGAGGTAG
TAAAGGCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGGAGATCCA
GGAGCACGTGAAGAAGACTACAGCGCCTTACAAATACCCCAGAAAGGTAGAATTTATTGAAGAGCTGCCG
AAGACTGTCAGTGGGAAGGTCAAAAGAAATGAACTGAGGAAAAAGGAATGGGTAACAACTTGA

Translation (580 aa):
MVMLLRARCFQRLAIPDPMRVLYKDYRTATPQNFSNYESMKQDFKIEIPEYFNFAKDVLDQWTNMEKAGK
RLSNPAFWWIDGNGEELRWSFEELGLLSRKFANILTEACSLQRGDRVMVILPKIPEWWLANVACLRTGTV
LIPGTTQLTQKDILYRLQSSKAKCIITDDTLAPAVDAVAAKCENLHSKLIVSQHSREGWGNLKEMMKYAS
DSHTCVDTKHDEMMAIYFTSGTTGPPKMIGHTHSSFGLGLSVNGRFWLDLIASDVMWNTSDTGWAKSAWS
SVFSPWTQGACVFAHYLPRFESTSILQTLSKFPITVFCSAPTAYRMLVQNDMSSYKFNSLKHCVSAGEPI
NPEVMEQWRKKTGLDIYEGYGQTETVLICGNFKGMKIKPGSMGKPSPAFDVKILDENGATLPPGQEGDIA
LQVLPERPFGLFTHYVDNPSKTASTLRGSFYITGDRGYMDEDGYFWFVARSDDIILSSGYRIGPFEVESA
LIEHPSIAESAVVSSPDPIRGEVVKAFIVLNPDYKSHDQEQLKKEIQEHVKKTTAPYKYPRKVEFIEELP
KTVSGKVKRNELRKKEWVTT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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