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Report for CCDS21741.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21741.1 Public Mus musculus 7 Dennd5a 23 108 98 CCDS HistoryNCBI Gene:19347Re-query CCDS DB by CCDS ID:21741.1Re-query CCDS DB by GeneID:19347See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21741.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080437.12 ENSMUSP00000079295.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080437.12Link to Ensembl Protein Viewer:ENSMUSP00000079295.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000080437Re-query CCDS DB by Protein ID:ENSMUSP00000079295
Original member Current member NCBI NM_021494.1 NP_067469.1 Accepted alive Link to Nucleotide Sequence:NM_021494.1Link to Protein Sequence:NP_067469.1Re-query CCDS DB by Nucleotide ID:NM_021494Re-query CCDS DB by Protein ID:NP_067469Link to BLAST:NP_067469.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067469.1 1287 Q6PAL8 1287 100% 0 0

Chromosomal Locations for CCDS 21741.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 109894632 109894815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109896243 109896411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109896947 109897070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109897904 109897986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109898508 109898689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109899044 109899162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109899724 109899869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109901060 109901181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109905170 109905298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109905696 109905780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109908331 109908415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109911915 109912067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109914721 109914852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109916211 109916304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109917385 109917535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109918594 109918828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109919262 109919477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109921194 109921511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109926827 109927014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109933613 109934270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109934693 109934802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109935482 109935553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 109960074 109960182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3864 nt):
ATGAGCGGCGGCGGCGGCGGAGGGGGCTCGGCGCCCAGTCGCTTCGCCGACTATTTTGTCATCTGCGGGC
TGGACACCGAGACCGGGCTGGAGCCGGACGAGCTGTCGGCATTATGCCAGTACATTCAGGCTTCTAAAGC
CAGGGATGGTGCCAGCCCTTTCATTTCAAGTACGACTGAAGGAGAAAATTTTGAGCAGACGCCATTGAGA
CGAACATTCAAGTCTAAGGTCCTTGCCCGATACCCTGAGAATGTAGACTGGAATCCCTTTGATCAGGATG
CAGTAGGAATGCTGTGCATGCCCAAAGGGCTGGCATTCAAGACCCAGGCTGATCCCAGGGAGCCACAGTT
CCATGCCTTTATTATCACAAGGGAGGATGGTTCTCGGACATTTGGGTTTGCTCTTACCTTTTATGAAGAA
GTGACCAGCAAGCAAATCTGCAGTGCAATGCAGACCCTCTACCACATGCACAATGCTGAGTATGATGTCC
TTCATGCTCCACTTGCTGATGGTGGAGACCAGAGTGGCATGGAAGATGGTGAAGGCATTCCTGGGACCAA
GCTGCAGCGCTTCAACTCCTATGATATTAGCAGGGACACACTCTATGTCTCTAAATGCATCTGTCTCATT
ACACCCATGTCTTTCATGAAGGCATGTCGGAGTGTGCTGCAGCAGCTCCACCAGGCAGTCACATCGCCTC
AGCCCCCTCCTCTGCCCCTTGAGAGCTACATATACAACGTACTCTATGAGGTGCCACTTCCACCTCCTGG
CCGCTCCCTAAAGTTTTCTGGGGTCTATGGGCCAATAATCTGCCAGAGACCAAGTACCAATGAGCTTCCT
CTATTCGATTTTCCCGTCAAAGAGGTCTTTGAACTGCTTGGGGTGGAGAATGTGTTTCAGCTTTTTACTT
GTGCCCTTCTGGAGTTTCAAATACTGCTCTACTCACAGCATTACCAGAGACTGATGACTGTGGCGGAGAC
AATTACAGCTCTGATGTTTCCTTTCCAGTGGCAGCATGTCTATGTCCCCATCCTCCCAGCTTCTCTCCTG
CATTTCTTAGATGCTCCTGTACCATACCTGATGGGCTTGCATTCCAACGGCCTGGATGACCGCTCCAAGT
TGGAGCTGCCTCAGGAGGCTAACCTCTGCTTTGTGGATGTTGACAACCACTTCATTGAGTTGCCAGAGGA
CTTGCCTCAATTTCCCAACAAACTGGAGTTTGTCCAGGAGGTCTCTGAGATCCTCATGGCCTTTGGCGTT
CCCCCTGAAGGGAACCTCCATTGCAGCGAAAGCGCCTCAAAGCTGAAGAGGATCCGAGCTTCTGAGCTTG
TGTCTGACAAGAGGAACGGGAACATTGCGGGCTCCCCTTTGCACTCCTATGAGCTCCTCAAGGAAAATGA
AACTATTGCTCGGTTGCAAGCTTTGGTCAAGAGGACTGGAGTGAGTTTGGAAAAACTGGAAGTTCGTGAA
GATCCCAGTAGCAATAAAGATTTCAAAGTTCAATGTGATGAAGAAGAGCTCAGGATTTACCAGCTAAACA
TTCAAATCCGGGAAGTCTTTGCCAATCGCTTTACTCAGATGTTTGCCGATTATGAAGTGTTTGTCATCCA
GCCCAGCCAGGATAAGGAGTCCTGGTTCACCAACAGGGAACAGATGCAGAACTTTGATAAAGCATCCTTC
CTGTCAGATCAGCCTGAGCCCTACCTGCCCTTCCTCTCAAGATTCCTAGAGACCCAGATGTTTGCATCTT
TTATTGATAACAAGATCATGTGTCATGATGATGATGATAAAGACCCTGTCCTCCGGGTCTTTGACTCAAG
GGTAGACAAGATCAGACTGTTGAATGTTCGAACACCTACTCTTAGGACATCTATGTACCAGAAGTGTACC
ACTGTGGATGAAGCAGAAAAAGCAATTGAACTACGTCTGGCAAAAATTGACCATACTGCAGTTCACCCAC
ATCTTCTTGACATGAAAATTGGACAAGGAAAATATGAACCTGGCTTTTTCCCTAAGCTGCAGTCTGATGT
GCTTTGCACCGGGCCAGCCAGCAACAAGTGGACAAAAAGGAATGCCCCTGCACAGTGGAGGCGGAAAGAC
CGGCAGAAGCAGCACACAGAACACTTGCGCTTAGACAATGACCAGAGAGAGAAGTACATCCAGGAAGCCA
GGAATATGGGCAGTACCATCCGTCAGCCCAAACTGTCCAACCTCTCTCCATCAGTCATTGCCCAGACCAA
CTGGAAGTTTGTAGAAGGCCTGCTGAAGGAATGTCGAAACAAGACCAAGAGGATGCTGGTAGAGAAGATG
GGTCGAGAGGCCGTGGAGCTGGGGCATGGGGAGGTGAACATCACCGGTGTGGAAGAGAACACTTTGATTG
CCAGCCTCTGTGACCTTCTGGAGAGGATCTGGAGCCATGGGCTACAAGTGAAGCAGGGGAAATCAGCTTT
GTGGTCCCATCTGTTACATTATCAGGAAAACCGGCAGAGAAAACTCACATCAGGAAGCCTTAGTACCTCA
GGAATACTTCTTGATTCAGAACGGAGAAAGTCTGATGCCAGTGCCGTCATGTCTCCCCTGAGGATTTCCC
TAATTCAGGATATGAGGCACATCCAGAATATTGGGGAAATCAAGACTGATGTGGGAAAAGCCAGAGCATG
GGTGCGACTGTCCATGGAGAAGAAATTACTGTCCAGACACCTGAAGCAGCTTCTTTCAGACCATGAGCTC
ACCAAGAAGCTGTACAAGCGTTACGCCTTCCTGCGCTGTGATGACGAGAAGGAGCAGTTCCTCTATCACC
TGCTCTCCTTCAACGCAGTGGACTACTTCTGCTTCACCAACGTCTTTACAACCATCCTGATTCCATACCA
CATTTTGATTGTACCAAGCAAGAAGCTGGGCGGCTCCATGTTCACCGCCAACCCGTGGATCTGTATATCA
GGAGAGCTGGGTGAGACCCAGATCCTGCAGATCCCCAGGAATGTGCTAGAGATGACGTTTGAGTGCCAGA
ACCTGGGGAAGCTCACCACTGTCCAGATTGGCCATGATAATTCTGGGCTGTATGCCAAGTGGCTTGTGGA
ATGTGTGATGGTCAGGAATGAGGTCACAGGACACACCTACAAGTTTCCGTGTGGCCGATGGCTGGGGAAG
GGTATGGACGACGGAAGCTTGGAGCGCGTGCTTGTTGGGGAGCTGCTCACTTCCCTACCTGAGGTGGATG
AGAGGCCTTGTCGCACTCCGCCACTACAGCAGTCCCCCAGTGTCATCCGGAGACTTGTGACCATCTCGCC
CAACAATAAGCCCAAGCTGAACACTGGGCAGATCCAGGAGTCCATTGGGGAGGCAGTCAATGGCATTGTG
AAGCACTTCCATAAACCTGAGAAAGAGCGTGGCAGCCTGACACTGTTGCTCTGTGGAGAGTGTGGTCTCG
TTTCAGCACTGGAACAAGCTTTTCAGCATGGATTTAAATCACCCCGGCTCTTCAAAAATGTCTTCATTTG
GGATTTCCTGGAGAAAGCACAAACCTATTATGAGACGTTAGAGCAGAATGACGTAGTTCCAGAAGAAAAC
TGGCACACACGGGCCCGCAATTTCTGCCGCTTTGTCACTGCAGTCAACAACACGCCCCGGAACATTGGCA
AGGACGGCAAATTTCAGATGCTGGTGTGCCTGGGAGCCAGAGATCACCTCCTGCACCACTGGATAGCCTT
GCTGGCCGACTGCCCCATCACTGCGCACATGTATGAGGACGTGGCGCTGATCAAGGACCACACACTCGTC
AATTCCTTGATCCGAGTGCTGCAGACCCTGCAAGAATTCAACATCACACTGGACACTTCCCTCGTTAAGG
GCATTGACATCTGA

Translation (1287 aa):
MSGGGGGGGSAPSRFADYFVICGLDTETGLEPDELSALCQYIQASKARDGASPFISSTTEGENFEQTPLR
RTFKSKVLARYPENVDWNPFDQDAVGMLCMPKGLAFKTQADPREPQFHAFIITREDGSRTFGFALTFYEE
VTSKQICSAMQTLYHMHNAEYDVLHAPLADGGDQSGMEDGEGIPGTKLQRFNSYDISRDTLYVSKCICLI
TPMSFMKACRSVLQQLHQAVTSPQPPPLPLESYIYNVLYEVPLPPPGRSLKFSGVYGPIICQRPSTNELP
LFDFPVKEVFELLGVENVFQLFTCALLEFQILLYSQHYQRLMTVAETITALMFPFQWQHVYVPILPASLL
HFLDAPVPYLMGLHSNGLDDRSKLELPQEANLCFVDVDNHFIELPEDLPQFPNKLEFVQEVSEILMAFGV
PPEGNLHCSESASKLKRIRASELVSDKRNGNIAGSPLHSYELLKENETIARLQALVKRTGVSLEKLEVRE
DPSSNKDFKVQCDEEELRIYQLNIQIREVFANRFTQMFADYEVFVIQPSQDKESWFTNREQMQNFDKASF
LSDQPEPYLPFLSRFLETQMFASFIDNKIMCHDDDDKDPVLRVFDSRVDKIRLLNVRTPTLRTSMYQKCT
TVDEAEKAIELRLAKIDHTAVHPHLLDMKIGQGKYEPGFFPKLQSDVLCTGPASNKWTKRNAPAQWRRKD
RQKQHTEHLRLDNDQREKYIQEARNMGSTIRQPKLSNLSPSVIAQTNWKFVEGLLKECRNKTKRMLVEKM
GREAVELGHGEVNITGVEENTLIASLCDLLERIWSHGLQVKQGKSALWSHLLHYQENRQRKLTSGSLSTS
GILLDSERRKSDASAVMSPLRISLIQDMRHIQNIGEIKTDVGKARAWVRLSMEKKLLSRHLKQLLSDHEL
TKKLYKRYAFLRCDDEKEQFLYHLLSFNAVDYFCFTNVFTTILIPYHILIVPSKKLGGSMFTANPWICIS
GELGETQILQIPRNVLEMTFECQNLGKLTTVQIGHDNSGLYAKWLVECVMVRNEVTGHTYKFPCGRWLGK
GMDDGSLERVLVGELLTSLPEVDERPCRTPPLQQSPSVIRRLVTISPNNKPKLNTGQIQESIGEAVNGIV
KHFHKPEKERGSLTLLLCGECGLVSALEQAFQHGFKSPRLFKNVFIWDFLEKAQTYYETLEQNDVVPEEN
WHTRARNFCRFVTAVNNTPRNIGKDGKFQMLVCLGARDHLLHHWIALLADCPITAHMYEDVALIKDHTLV
NSLIRVLQTLQEFNITLDTSLVKGIDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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