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Report for CCDS21379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21379.1 Public Mus musculus 7 Mfge8 23 108 98 CCDS HistoryNCBI Gene:17304Re-query CCDS DB by CCDS ID:21379.1Re-query CCDS DB by GeneID:17304See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21379.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032825.13 ENSMUSP00000032825.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032825.13Link to Ensembl Protein Viewer:ENSMUSP00000032825.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000032825Re-query CCDS DB by Protein ID:ENSMUSP00000032825
Original member Current member NCBI NM_008594.2 NP_032620.2 Accepted alive Link to Nucleotide Sequence:NM_008594.2Link to Protein Sequence:NP_032620.2Re-query CCDS DB by Nucleotide ID:NM_008594Re-query CCDS DB by Protein ID:NP_032620Link to BLAST:NP_032620.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032620.2 463 P21956-1 463 100% 0 0

Chromosomal Locations for CCDS 21379.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 79134409 79134546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79134652 79134801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79136657 79136841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79141645 79141789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79142402 79142554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79142869 79143050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79143278 79143388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79145247 79145378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79145622 79145744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 79148895 79148967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGCAGGTCTCCCGTGTGCTGGCCGCGCTGTGCGGCATGCTACTCTGCGCCTCTGGCCTCTTCGCCGCGT
CTGGTGACTTCTGTGACTCCAGCCTGTGCCTGAACGGTGGCACCTGCTTGACGGGCCAAGACAATGACAT
CTACTGCCTCTGCCCTGAAGGCTTCACAGGCCTTGTGTGCAATGAGACTGAGAGAGGACCATGCTCCCCA
AACCCTTGCTACAATGATGCCAAATGTCTGGTGACTTTGGACACACAGCGTGGGGACATCTTCACCGAAT
ACATCTGCCAGTGCCCTGTGGGCTACTCGGGCATCCACTGTGAAACCGAGACCAACTACTACAACCTGGA
TGGAGAATACATGTTCACCACAGCCGTCCCCAATACTGCCGTCCCCACCCCGGCCCCCACCCCCGATCTT
TCCAACAACCTAGCCTCCCGTTGTTCTACACAGCTGGGCATGGAAGGGGGCGCCATTGCTGATTCACAGA
TTTCCGCCTCGTCTGTGTATATGGGTTTCATGGGCTTGCAGCGCTGGGGCCCGGAGCTGGCTCGTCTGTA
CCGCACAGGGATCGTCAATGCCTGGACAGCCAGCAACTATGATAGCAAGCCCTGGATCCAGGTGAACCTT
CTGCGGAAGATGCGGGTATCAGGTGTGATGACGCAGGGTGCCAGCCGTGCCGGGAGGGCGGAGTACCTGA
AGACCTTCAAGGTGGCTTACAGCCTCGACGGACGCAAGTTTGAGTTCATCCAGGATGAAAGCGGTGGAGA
CAAGGAGTTTTTGGGTAACCTGGACAACAACAGCCTGAAGGTTAACATGTTCAACCCGACTCTGGAGGCA
CAGTACATAAAGCTGTACCCTGTTTCGTGCCACCGCGGCTGCACCCTCCGCTTCGAGCTCCTGGGCTGTG
AGTTGCACGGATGTTCTGAGCCCCTGGGCCTGAAGAATAACACAATTCCTGACAGCCAGATGTCAGCCTC
CAGCAGCTACAAGACATGGAACCTGCGTGCTTTTGGCTGGTACCCCCACTTGGGAAGGCTGGATAATCAG
GGCAAGATCAATGCCTGGACGGCTCAGAGCAACAGTGCCAAGGAATGGCTGCAGGTTGACCTGGGCACTC
AGAGGCAAGTGACAGGAATCATCACCCAGGGGGCCCGTGACTTTGGCCACATCCAGTATGTGGCGTCCTA
CAAGGTAGCCCACAGTGATGATGGTGTGCAGTGGACTGTATATGAGGAGCAAGGAAGCAGCAAGGTCTTC
CAGGGCAACTTGGACAACAACTCCCACAAGAAGAACATCTTCGAGAAACCCTTCATGGCTCGCTACGTGC
GTGTCCTTCCAGTGTCCTGGCATAACCGCATCACCCTGCGCCTGGAGCTGCTGGGCTGTTAA

Translation (463 aa):
MQVSRVLAALCGMLLCASGLFAASGDFCDSSLCLNGGTCLTGQDNDIYCLCPEGFTGLVCNETERGPCSP
NPCYNDAKCLVTLDTQRGDIFTEYICQCPVGYSGIHCETETNYYNLDGEYMFTTAVPNTAVPTPAPTPDL
SNNLASRCSTQLGMEGGAIADSQISASSVYMGFMGLQRWGPELARLYRTGIVNAWTASNYDSKPWIQVNL
LRKMRVSGVMTQGASRAGRAEYLKTFKVAYSLDGRKFEFIQDESGGDKEFLGNLDNNSLKVNMFNPTLEA
QYIKLYPVSCHRGCTLRFELLGCELHGCSEPLGLKNNTIPDSQMSASSSYKTWNLRAFGWYPHLGRLDNQ
GKINAWTAQSNSAKEWLQVDLGTQRQVTGIITQGARDFGHIQYVASYKVAHSDDGVQWTVYEEQGSSKVF
QGNLDNNSHKKNIFEKPFMARYVRVLPVSWHNRITLRLELLGC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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