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Report for CCDS21256.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21256.1 Public Mus musculus 7 Rasip1 23 108 98 CCDS HistoryNCBI Gene:69903Re-query CCDS DB by CCDS ID:21256.1Re-query CCDS DB by GeneID:69903See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21256.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000057927.9 ENSMUSP00000062429.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000057927.9Link to Ensembl Protein Viewer:ENSMUSP00000062429.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000057927Re-query CCDS DB by Protein ID:ENSMUSP00000062429
Original member Current member NCBI NM_028544.1 NP_082820.1 Accepted alive Link to Nucleotide Sequence:NM_028544.1Link to Protein Sequence:NP_082820.1Re-query CCDS DB by Nucleotide ID:NM_028544Re-query CCDS DB by Protein ID:NP_082820Link to BLAST:NP_082820.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_082820.1 961 Q3U0S6 961 100% 0 0

Chromosomal Locations for CCDS 21256.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 45627770 45627906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45628414 45629081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45630140 45630495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45632236 45632889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45634817 45634854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45634967 45635118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45635216 45635331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45636338 45636581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45636720 45636892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45637870 45638017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 45638685 45638884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2886 nt):
ATGCTATCTGGTGAACGAAAGGAGGGCGGAAGCCCCCGCTTCGGGAAGCTCCATCTTCCAGTGGGCCTGT
GGATCAATTCCCCAAGGAAACAGCTCGCCAAACTGGGGCGGCGCTGGCCCAGCGCTGCCTCTGTCAAGTC
CTCGTCCTCCGACACGGGGAGCCGAAGCAGCGAGCCCCTGCCGCCGCCGCCGCCGCCGCCGCACGTGGAG
CTGCGGCGCGTAGGTGCGGTGAAGGCGGCGGGGGGAGCGTCGGGCAGCCGAGCCAAGCGCATCTCGCAGC
TGTTTCGGGGCTCAGGGGCCGGCGGCGCCGGGGGTCCTGGCACGCCTGGGGGCGCGCAGCGCTGGGCCAG
CGAGAAGAAGCTGCCTGAACTGGCGGCGGGTGTAGCTCCGGAGCCCCCGTTGCCCACGCGTGCCGCGGTG
CCCCCGGGAGTGCTCAAGATCTTCGCTTCTGGGCTGGCGTCGGGCGCCAACTACAAGAGCGTGCTGGCTA
CGGAGCGATCCACCGCGCGCGAGCTGGTGGCGGAGGCGCTGGAGCGCTACGGGCTGACGGGCGGCCGCGG
AGCGGGCGACAGCGGCTGCGTGGACGCCTACGCGCTTTGCGACGCTCTGGGCCGGCCCGCGGTCGGCGTG
GGCGGAGGCGAGTGGCGTGCCGAGCACCTGCGGGTGTTGGCCGACGCGGAGCGCCCTCTGCTGGTGCAGG
ACCTGTGGCGCGCCCGTCCGGGCTGGGCGCGGCGCTTTGAGCTGCGCGGCCGCGAGGAGGCTCGACGGCT
GGAGCAGGAGGCCTTCGGGGCTGCGGATGCAGACGGCACAAACGCCCCATCTTGGCGGACCCAGAAGAAT
AGGTCTCGGGCAGCATCTGGCGGGGCAGCTCTGGCCAGTCCTGGTCCAGGATCAGGATCCGGGACCCCCA
CTGGGTCCGGGGGCAAGGAGCGATCTGAAAATTTGTCTCTGCGTCGAAGCGTGTCTGAGCTGAGTCTACA
GGGGCGGAGGCGAAGGCAGCAGGAACGCAGGCAGCAGGCCCTTAGCATGGCCCCAGGGGCAGCTGATGCT
CAGATGGTACCAACGGACCCTGGAGACTTCGATCAGTTGACTCAGTGCCTCATTCAGGCACCCAGCAACC
GTCCCTACTTCCTTCTGCTCCAGGGCTACCAGGATGCTCAGGACTTCGTGGTGTATGTCATGACACGAGA
GCAGCACGTGTTCGGCCGGGGTGGGCCCTCCTCGTCCCGCGGGGGATCCCCAGCCCCATATGTGGACACC
TTCCTCAACGCCCCAGACATCCTGCCTCGACATTGCACGGTGCGCGCGGGCCCTGAGCCCCCGGCCATGG
TGCGCCCATCCCGGGGCGCCCCCGTCACACACAATGGCTGTCTTTTGCTGCGGGAGGCAGAGCTGCACCC
CGGAGACCTGTTAGGCCTAGGAGAGCATTTCCTGTTCATGTACAAGGACCCCCGCTCCGGGGGTTCTGGG
CCCGCTCGGCCATCTTGGCTGCCAGCGCGCCCCGGGGCCGCGCCACCCGGACCGGGCTGGGCCTTTTCTT
GTCGTTTGTGTGGCCGTGGCCTGCAGGAGCGCGGCGAGGCGCTGGCCGCCTACCTGGATGGCCGCGAGCC
GGTGCTGCGGTTCAGACCACGAGAGGAAGAGGCGCTGTTGGGCGAGATCGTGCGAGCTGCAGCCTCGGGA
GCAGGGGACCTGCCCCCGCTCGGGCCAGCCACTCTGCTGGCACTGTGTGTGCAGCATTCTGCGAGGGAGC
TGGAGCTGGGCCACCTGCCTCGCTTGCTGGGCCGCCTGGCCCGGCTCATCAAAGAAGCCGTTTGGGAAAA
AATTAAAGAAATTGGAGACCGCCAGCCAGAGAACCACCCAGAGGGAGTTCCCGAGGTGCCTCTGACCCCT
GAGGCTGTGTCTGTGGAGCTGCGACCACTCATACTATGGATGGCCAACACCACAGAGCTGTTGAGCTTTG
TACAGGAGAAAGTGCTAGAGATGGAGAAGGAGGCTGACCAGGAGGGCCTGTCCTCGGACCCACAGCTCTG
CAATGACTTGGAACTGTGTGATGAGGCCTTGGCCCTCCTGGATGAGGTCATCATGTGTACTTTCCAGCAG
TCGGTCTACTACCTCACCAAGACTCTTTATTCAACACTGCCAGCTCTCCTGGACAGTAACCCTTTCACAG
CTGGAGCAGAGCTGCCAGGGCCTGGCGCAGAGCTGGAGGCCATGCCGCCTGGGCTCAGGCCTACTCTGGG
TGTGTTCCAGGCAGCTCTAGAACTGACCAGTCAGTGTGAGCTGCATCCCGACCTCGTGTCCCAGACTTTT
GGCTATTTGTTCTTCTTCTCCAATGCATCCCTTCTCAACTCACTGATGGAACGAGGTCAAGGCCGACCTT
TCTATCAATGGTCTCGAGCCGTCCAAATCAGAACCAACTTGGATCTTGTGTTGGATTGGCTTCAGGGGGC
CGGGCTGGGTGACATTGCCACTGAGTTCTTCCGGAAACTTTCCATTGCTGTGAACCTGCTATGTGTGCCC
CGCACCTCCCTGCTCAAGGCTTCATGGAGCAGCTTACGGACTGACTACCCCACCCTGACTCCAGCTCAGC
TCCACCATCTCCTCAGCCACTACCAGTTGGGTCCTGGCCGTGGTCCCCCACCAGCCTGGGACCCACCACC
TGCAGAGCGGGATGCTGTGGACACAGGGGATATCTTTGAAAGTTTTTCCTCGCACCCTCCGCTCATCCTG
CCCCTGGGCAGCTCACGCCTGCGCCTCACCGGCCCTGTGACAGATGACGCATTGCATAGAGAACTGCGCA
GGCTCCGTCGCCTCCTCTGGGATCTTGAACAGCAGGAGCTGCCAGCCAATCATCGCCATGGACCCCCGGT
GGCTTCGACACCTTGA

Translation (961 aa):
MLSGERKEGGSPRFGKLHLPVGLWINSPRKQLAKLGRRWPSAASVKSSSSDTGSRSSEPLPPPPPPPHVE
LRRVGAVKAAGGASGSRAKRISQLFRGSGAGGAGGPGTPGGAQRWASEKKLPELAAGVAPEPPLPTRAAV
PPGVLKIFASGLASGANYKSVLATERSTARELVAEALERYGLTGGRGAGDSGCVDAYALCDALGRPAVGV
GGGEWRAEHLRVLADAERPLLVQDLWRARPGWARRFELRGREEARRLEQEAFGAADADGTNAPSWRTQKN
RSRAASGGAALASPGPGSGSGTPTGSGGKERSENLSLRRSVSELSLQGRRRRQQERRQQALSMAPGAADA
QMVPTDPGDFDQLTQCLIQAPSNRPYFLLLQGYQDAQDFVVYVMTREQHVFGRGGPSSSRGGSPAPYVDT
FLNAPDILPRHCTVRAGPEPPAMVRPSRGAPVTHNGCLLLREAELHPGDLLGLGEHFLFMYKDPRSGGSG
PARPSWLPARPGAAPPGPGWAFSCRLCGRGLQERGEALAAYLDGREPVLRFRPREEEALLGEIVRAAASG
AGDLPPLGPATLLALCVQHSARELELGHLPRLLGRLARLIKEAVWEKIKEIGDRQPENHPEGVPEVPLTP
EAVSVELRPLILWMANTTELLSFVQEKVLEMEKEADQEGLSSDPQLCNDLELCDEALALLDEVIMCTFQQ
SVYYLTKTLYSTLPALLDSNPFTAGAELPGPGAELEAMPPGLRPTLGVFQAALELTSQCELHPDLVSQTF
GYLFFFSNASLLNSLMERGQGRPFYQWSRAVQIRTNLDLVLDWLQGAGLGDIATEFFRKLSIAVNLLCVP
RTSLLKASWSSLRTDYPTLTPAQLHHLLSHYQLGPGRGPPPAWDPPPAERDAVDTGDIFESFSSHPPLIL
PLGSSRLRLTGPVTDDALHRELRRLRRLLWDLEQQELPANHRHGPPVASTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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