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Report for CCDS21029.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21029.1 Public Mus musculus 7 Zfp607b 23 108 98 CCDS HistoryNCBI Gene:112415Re-query CCDS DB by CCDS ID:21029.1Re-query CCDS DB by GeneID:112415See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21029.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076421.6 ENSMUSP00000075755.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076421.6Link to Ensembl Protein Viewer:ENSMUSP00000075755.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000076421Re-query CCDS DB by Protein ID:ENSMUSP00000075755
Original member Current member EBI ENSMUST00000120004.7 ENSMUSP00000112494.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120004.7Link to Ensembl Protein Viewer:ENSMUSP00000112494.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120004Re-query CCDS DB by Protein ID:ENSMUSP00000112494
Original member Current member NCBI NM_001112731.1 NP_001106202.1 Accepted alive Link to Nucleotide Sequence:NM_001112731.1Link to Protein Sequence:NP_001106202.1Re-query CCDS DB by Nucleotide ID:NM_001112731Re-query CCDS DB by Protein ID:NP_001106202Link to BLAST:NP_001106202.1
Original member Current member NCBI NM_198417.2 NP_940809.2 Accepted alive Link to Nucleotide Sequence:NM_198417.2Link to Protein Sequence:NP_940809.2Re-query CCDS DB by Nucleotide ID:NM_198417Re-query CCDS DB by Protein ID:NP_940809Link to BLAST:NP_940809.2

Chromosomal Locations for CCDS 21029.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 27692502 27692534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27693482 27693608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27698653 27698751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 27702380 27704067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1947 nt):
ATGGCCAGCTCCAGTTCTCAACACATGGTCTGTGGGTCAGTGACATTTAGGGATGTGGCTGTTGACTTCT
CTCAGGAGGAGTGGGCCTGCCTGGATGCTACTCAGAAGGTGTTATACAGGAACATAATGTTGGAGACCTA
CAGCAACCTGGTCGCAGTGGTGGGACGTTGTATTTCCAAGCCAGATCTGATCGTCTTACTAGAGCAGGAG
AAAGAGCCCTGGATGGCTGTGAAGGAAGAAACAGACAGGCCGAGCCCAGATGTGGAGACATGTGTTGAAG
CTGAAAATATATCTCCGGAGAATCATATGTCTGATGTAAATTTACACAAACAGAGCATAAGGCAATTCAG
TAAAACTTTTGACCTTAAAGAGTCTACTTTTAGTGATGGCCCCAGCTGTAGTACATTCAAAGGACTACAG
GGTTATCAAGGAGATGCTGATGAAAGGGTTACTAAGAAGGAAAGAGTGCCTCCTTGTACCTGCCAGACTC
TTGCTCACAATACAGAAAAGGCATATGAGTGTAAAGAGTGTGGGACGTGCTTCGATTGTAGTTCAGCTCT
TACTCAGCATCAGAGTGTTCATGCTGGAGAGAAGCTCTATGAATGTAAGGAGTGTGGGAAGGCCTTCAGA
CTCCCCCAAGAGCTCACAAGGCATCAGAAGTCTCACAGTGGTGAGAAACCTTTCCAGTGTAATGAATGTG
GAAAGGCTTTTCATCTTCCCGACCTGCTGAAATATCATAAAGTCATTCATACAGGTGAAAAGCCTTTTGA
ATGTGAAGTATGTGGGAAGTTCTTCAGCCGTGTCTCCAGCCTTGCTGAACATAGGATTGTCCATGCTGAT
GTGAAACCCTATGAGTGTAGTGAGTGTGGGAAAGCCTTTAAACGTCGCTCAGACCTAATGCAACATCAGA
AAATCCATTCTGGTGAGAGACCCTTTCAGTGTAAGGACTGTGGGAAGGCCTTCATTGTTCTGGCACAGCT
CGCTCAGCACCAGAGCATTCACACTGGAGAGAAATTGGAATGTAAGCATTGTGGGAAGATATTTAGTAGT
GGTTTTTACCTTGTACGACACCAGAGTATTCACACTGGTGAGAAACCCTTTGGGTGTCATGTCTGTGGCA
AGGCTTTTAGGCTTCAGGTATACCTTAATGAGCATCAGAAAACTCACACCGATGAGAAACCTTTCAAGTG
TAAGCTGTGTGGGTCAGCCTTTAGACGTAAATACCAGCTCAGTGAACATCAGAAAATCCATACCAATGTG
AAACCGTATCAGTGCAAAGAATGTGGGAAATCCTTTCGTCGACGATCAAATTTTACTGAGCATCAGAGTA
TTCACACTGGAAAGAAACCCTTTGAATGTAAGGACTGTGGGAAGGTCTTTAGACTAAATATACATCTCAT
TCGACACCAGAGATTTCATAGTGGTAAGACACCTTTTGAATGTAATGAATGTGGAAAGGGCTTTCATTTT
TCCAGCCAGCTTAATTACCATAAAACCATTCATACAGGTCAGACACCTTTTGAATGTAAAGAATGTGGGA
AGTCTTTCAAGCGCATCTGCAGCCTTTTGGAACATGGGGTTATTCATGCTGCTGTGAAACCATTTGAATG
TAGTGAGTGTGGGAAAACCTTTAATCGTCGCTCAAACCTCATACAACATCAGAAAATTCATTCTGATGAG
AGACCCTTTGAGTGTAAGGACTGTGGGAAGGCCTTCACTGTTCTGGCTCAGCTCACACGACACCACACTA
TTCATACTGGAAAGAAATCATATGAATGTGAGCAGTGTGGGTCAGCCTTCAGACTCCCGTACCAACTCAC
TCAACATCAGAGAATTCATGATGATGTGAAACCATTTCAGTGCAAGGAATGTGGAAAGGGCTTTGTTCGT
GGTACAGCTCTTAGAATCCACCAAAGAGTCCATACTGGTGAGGCCCTTCCAGTGTGA

Translation (648 aa):
MASSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCISKPDLIVLLEQE
KEPWMAVKEETDRPSPDVETCVEAENISPENHMSDVNLHKQSIRQFSKTFDLKESTFSDGPSCSTFKGLQ
GYQGDADERVTKKERVPPCTCQTLAHNTEKAYECKECGTCFDCSSALTQHQSVHAGEKLYECKECGKAFR
LPQELTRHQKSHSGEKPFQCNECGKAFHLPDLLKYHKVIHTGEKPFECEVCGKFFSRVSSLAEHRIVHAD
VKPYECSECGKAFKRRSDLMQHQKIHSGERPFQCKDCGKAFIVLAQLAQHQSIHTGEKLECKHCGKIFSS
GFYLVRHQSIHTGEKPFGCHVCGKAFRLQVYLNEHQKTHTDEKPFKCKLCGSAFRRKYQLSEHQKIHTNV
KPYQCKECGKSFRRRSNFTEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSGKTPFECNECGKGFHF
SSQLNYHKTIHTGQTPFECKECGKSFKRICSLLEHGVIHAAVKPFECSECGKTFNRRSNLIQHQKIHSDE
RPFECKDCGKAFTVLAQLTRHHTIHTGKKSYECEQCGSAFRLPYQLTQHQRIHDDVKPFQCKECGKGFVR
GTALRIHQRVHTGEALPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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