CCDS Report for Consensus CDS

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Report for CCDS19662.1 (current version)

CCDS	Status	Species	Chrom.	Gene	CCDS Release	NCBI Annotation Release	Ensembl Annotation Release	Links
19662.1	Public	Mus musculus	5	Mlxip	23	108	98

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19662.1

Original	Current	Source	Nucleotide ID	Protein ID	Status in CCDS	Seq. Status	Links
		EBI	ENSMUST00000068237.11	ENSMUSP00000064943.5	Accepted	alive
		NCBI	NM_133917.3	NP_598678.2	Accepted	alive

RefSeq	Length	Related UniProtKB/SwissProt	Length	Identity	Gaps	Mismatches
NP_598678.2	917	Q2VPU4-1	917	99.8909%	0	1

Chromosomal Locations for CCDS 19662.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)

Genome Browser links:

Chromosome	Start	Stop
5	123394930	123395342
5	123440036	123440142
5	123440813	123440898
5	123442282	123442371
5	123442728	123442769
5	123443030	123443201
5	123443876	123443965
5	123444445	123444536
5	123445468	123446122
5	123447178	123447299
5	123447419	123447575
5	123449290	123449414
5	123449896	123449994
5	123450096	123450223
5	123450427	123450550
5	123452538	123452667
5	123453392	123453513

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.

Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2754 nt):
ATGGCTGCCGACGTTTTCATGTGTTCGCCGCGCCGGCCCCGCAGTCGGGGCCGTTCGGTGCTGCTCAAGC CTCAGGTGCCCGAGGACGACGACGACTCGGACACAGACGAGCCGTCTCCGCCGCCCCCCTCCGGCGTGGC CACTTCAGCCCGGGCCCACGCGAGCGCCGCGCCGCTGCCGCCTCGGGCCGGCCCGGGCCGCGAGGAGCCT CCGCGCCGACAGCAGATCATCCACAGCGGCCACTTCATGGTGTCCTCTCCGCACCGCGAGCACCCGCCCA AGAAGGGCTATGATTTCGACACGGTCAACAAGCAGACGTGCCAGACCTATAGCTTCGGCAAGACCAGCTC CTGCCACTTGTCCATCGATGCGTCGCTCACCAAGCTCTTCGAGTGCATGACCCTGGCCTACAGTGGGAAA TTAGTGTCTCCAAAGTGGAAAAATTTCAAGGGCCTGAAGCTCCAGTGGCGGGACAAGATCCGGCTCAACA ACGCCATCTGGAGGGCATGGTATATGCAGTATTTGGAGAAGCGCAAGAATCCTGTGTGCCACTTTGTCAC CCCACTAGATGGCTCTGTTGATGTAGATGAACACCGTCGGCCAGAGGCCATCACCACAGAGGGCAAGTAC TGGAAAAGCCGCATTGAGATTGTGATTCGAGAGTACCACAAGTGGAGAACCTACTTCAAGAAAAGGCTGC AGCAGCACAAGGATGAGGACCTTTCTAGCCTGGCCCAGGACGATGACATGCTGTATTGGCATAAACATGG GGATGGCTGGAAAACCCCAGTCCCCATGGAGGAGGACTCACTGCTGGACACAGACATGCTCATGTCAGAA TTCAGCGACACTCTCTTCTCCACACTCTCTTCACACCAACCCGTGGCCTGGCCCAACCCACGAGAAATAG CACATCTGGGAAACGCAGACATGATCCAGCCAGGCCTGATCCCTTTGCAACCCAACCTGGACTTCATGGA CACCTTTGAGCCTTTCCAGGATCTCTTCTCCTCCAGCCGATCCATTTTTGGCTCCATGTTGCCTCCTCCT TCATCATTACCTGCCGCAGATCCTAGCAGCCCACCTTCTCAGGGGAACATCTTGCCAAATACAGCTCTCC CTCCTGCGAGCCTGCCCAATAGCCTCATTACATCTTCTGCAGCCCCCTCCCTGGATCCCACAGAGGGCCA GGGTTGTGAACGCACATCCCAAACGGTGGACCCGTTTATTCAGCCTGCAGACTTTGGTCCCTCTGAGCCA CCACTGAGTGTCCCACAGCCCTTCCTCCCTGTCTTTACGATGACCTTACTTTCCCCTGGCCCCGCCCCAG CACCTGTTCCAACTGCATTGCCCTTAGTTCCTTCGCCTGCCCCTACTCTAAACCCCCCAACTCCACCAGC TTTCCTGCAGCCACAGAAGTTTGCTGGAGTCAGCAAATCCACCCCTGTTATTACCCACACAGCCTCTGCA ACCCTTACCCATGATGCTTCTGCCACCACCTTCAGCCAGAACCAGGGCCTTGTTATCACAGCACACCATC CAACCCCCTCCTCATCCCCCTGTGCTTTGGCACTGTCACCCGTACCCCAGCCACCAGCCGTGGGACCTCC CCAACCTCATTTAACTTTTATACACCCCAAACCTGTGTCCTTGACTGGAGTGAGACACAAGCAGCCCCCC AAAATAGTGCCTGCTCCTAAACCTGAGCCTGTCTCCTTGGTGTTGAAGAATGCCTGCATTGCTCCAGCTG CCTTCTCAGGCCAACCGCAGAAGGTGATCATGACATCAGCTCCTCTGAAGAGAGAAGGGATTCTAGCATC TACTGTGTCCCCATCCAATGTGGTCATTGCTTCTGCTGCCATCACCAGGGCTTCTGGAGTCACGGAGTTC CTCAGCCACAGCACGAGCAGCCAGCCTAGCCCCGTCTCTCGACTCTTTTCTCCAAGTACAGTGCAAGACT CCCTGGTGAAGGGCGAGCAGGTCTCACTGCATGGGGGTAGTCCCCAGGTCCCTGCCACGGGCTCTAGTCG TGACTGCCCTAACTCAGGCCAAGCCTCTCCATGCCCATCAGAACAAAGTCCCAGTCCTCAGTCTCCCCAG AACAACTGCTCAGGGAAATCTACAGACCCCAAAAATGTGGCTGCATTAAAGAACCGGCAGAAGCACATCT CAGCTGAACAGAAAAGGCGTTTCAATATCAGGATGGGCTTTAACACCCTGAATAGCTTGATCTCCAATAA TTCCAAGCAGACCAGCCACGCTATCACACTGCAGAAGACCATGGAGTACATCACCAAACTGCAGCAGGAG CGGATGCAGATGCAAGAGGAGGCCCGGAGGCTGCGGGAGGAGATCGAGGAGCTTAACACCACCATCATCT CCTGCCAACAGCTGCTACCTGCCACAGGAGTCCCAGTCAACTGCCGCCAGCTTGACCACATGAGAGACAT GTTTGATGAATATGTGAAAAGCAGGACCCTGCAGAATTGGAAATTCTGGATTTTCAGCATGATCATCAAG CCACTGTTTGAGTCTTTCAAGGGGATGGTATCTACCAGCAGCTTGGAGGAGTTCCACCGCACGGCGCTTT CCTGGCTGGATCAGCACTGCTCTCTTCCTGTCCTCAGGCCAATGGTACTGAGTACCCTCCGTCAGCTGAG TACCACCACCTCCATCCTGACGGATCCATCCCAGCTGCCCGAGCAAGCATCAGAGGCTGTTACCAGGATG GGCAAGAGATCGGGGGAGTCCTAA
Translation (917 aa):
MAADVFMCSPRRPRSRGRSVLLKPQVPEDDDDSDTDEPSPPPPSGVATSARAHASAAPLPPRAGPGREEP PRRQQIIHSGHFMVSSPHREHPPKKGYDFDTVNKQTCQTYSFGKTSSCHLSIDASLTKLFECMTLAYSGK LVSPKWKNFKGLKLQWRDKIRLNNAIWRAWYMQYLEKRKNPVCHFVTPLDGSVDVDEHRRPEAITTEGKY WKSRIEIVIREYHKWRTYFKKRLQQHKDEDLSSLAQDDDMLYWHKHGDGWKTPVPMEEDSLLDTDMLMSE FSDTLFSTLSSHQPVAWPNPREIAHLGNADMIQPGLIPLQPNLDFMDTFEPFQDLFSSSRSIFGSMLPPP SSLPAADPSSPPSQGNILPNTALPPASLPNSLITSSAAPSLDPTEGQGCERTSQTVDPFIQPADFGPSEP PLSVPQPFLPVFTMTLLSPGPAPAPVPTALPLVPSPAPTLNPPTPPAFLQPQKFAGVSKSTPVITHTASA TLTHDASATTFSQNQGLVITAHHPTPSSSPCALALSPVPQPPAVGPPQPHLTFIHPKPVSLTGVRHKQPP KIVPAPKPEPVSLVLKNACIAPAAFSGQPQKVIMTSAPLKREGILASTVSPSNVVIASAAITRASGVTEF LSHSTSSQPSPVSRLFSPSTVQDSLVKGEQVSLHGGSPQVPATGSSRDCPNSGQASPCPSEQSPSPQSPQ NNCSGKSTDPKNVAALKNRQKHISAEQKRRFNIRMGFNTLNSLISNNSKQTSHAITLQKTMEYITKLQQE RMQMQEEARRLREEIEELNTTIISCQQLLPATGVPVNCRQLDHMRDMFDEYVKSRTLQNWKFWIFSMIIK PLFESFKGMVSTSSLEEFHRTALSWLDQHCSLPVLRPMVLSTLRQLSTTTSILTDPSQLPEQASEAVTRM GKRSGES

	Links Key
	Links to:	History report BLAST report Entrez Gene Nucleotide report Protein report
	Re-query CCDS DB by:	CCDS ID Gene ID Nucleotide ID Protein ID
	Genome Browser Links:	Ensembl Genome Browser NCBI Sequence Viewer UCSC Genome Browser VEGA Genome Browser

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