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Report for CCDS19437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19437.1 Public Mus musculus 5 Ccng2 23 108 98 CCDS HistoryNCBI Gene:12452Re-query CCDS DB by CCDS ID:19437.1Re-query CCDS DB by GeneID:12452See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19437.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031331.12 ENSMUSP00000031331.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031331.12Link to Ensembl Protein Viewer:ENSMUSP00000031331.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000031331Re-query CCDS DB by Protein ID:ENSMUSP00000031331
Original member Current member EBI ENSMUST00000121127.1 ENSMUSP00000113278.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000121127.1Link to Ensembl Protein Viewer:ENSMUSP00000113278.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000121127Re-query CCDS DB by Protein ID:ENSMUSP00000113278
Original member Current member NCBI NM_007635.4 NP_031661.3 Accepted alive Link to Nucleotide Sequence:NM_007635.4Link to Protein Sequence:NP_031661.3Re-query CCDS DB by Nucleotide ID:NM_007635Re-query CCDS DB by Protein ID:NP_031661Link to BLAST:NP_031661.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031661.3 344 O08918 344 100% 0 0

Chromosomal Locations for CCDS 19437.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 93268622 93268759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 93269265 93269402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 93270794 93271044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 93271201 93271279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 93271363 93271461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 93273338 93273543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 93274874 93274997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1035 nt):
ATGAAGGATTTGGGGGCCAAGCACTTGGCAGGTGGCGAAGGGGTTCAGCTTTTCGGATTGTTGAACTTCT
ACCTGGAACAAGAACAGAGATACCAACCTCGGGAAAAAGGGCTGATCTTGATGGAGGCTACCCCGGAGAA
TGATAACACTTTGTGTTCAAGACTGAGAAATGCCAAAGTGGAAGATTTAAGAAGTTTAACTAACTTCTTT
GGATCTGGCACTGAAACTTTCGTTCTGGCTGTCAATATTTTGGATAGATTCTTGGCCCTTATGAAGGTGA
AACCGAAACACCTGTCCTGCATTGGCGTCTGCTGCTTTTTGCTGGCCGCCAGGCTGGCGGAAGAAGAAGG
TGACGTTCCCCCCACGCACGATGTGATCCGCATCAGTCAGTGTAAATGCACAGCGTCTGACATTAAACGC
ATGGAGAAAATCATCTCAGAGAAACTGCACTATGAGCTGGAAGCTACCACTGCCTTAAACTTTTTGCACT
TGTACCACGCGATTGTATTTTGTCACACTTCAGAAAGGAAGGAGATTCTCAGCCTCGATAAACTCGAAGC
GCAGCTGAAAGCTTGCAACTGCCGAGTTGTCTTCTCCAAAGCAAGACCATCTGTATTAGCTCTGTGCCTT
CTCAATTTGGAAATAGAAACGATAAAATCCGTGGAACTGCTGGAAATTCTCTTGCTTGTTAAAAAACATT
TGAAGCTCAGCGACACTGAATTCTTTTACTGGAGGGAACTGGTTTCTAAATGTCTAGCAGAGTATTCTTC
GCCTCGCTGCTGCAAGCCTGATCTGAAGAAGCTGGTATGGATTGTTTCGCGACGCACTGCGCAGAACCTC
CACAGCAGCTACTACAGTGTTCCTGAGCTGCCCACTATCCCAGAGGGGGGTTGCTTTGACGGAAGTGAAA
GTGAGGACTCTGGTGAAGACATGAGTTGTGGAGAGGAGAGTCTCAGCAGCTCCCCACCCAGCGATCAGGA
GTGCACCTTCTTCTTTGACTTCCAAGTGGCTCAGACACTGTGCTTTCCACCATAG

Translation (344 aa):
MKDLGAKHLAGGEGVQLFGLLNFYLEQEQRYQPREKGLILMEATPENDNTLCSRLRNAKVEDLRSLTNFF
GSGTETFVLAVNILDRFLALMKVKPKHLSCIGVCCFLLAARLAEEEGDVPPTHDVIRISQCKCTASDIKR
MEKIISEKLHYELEATTALNFLHLYHAIVFCHTSERKEILSLDKLEAQLKACNCRVVFSKARPSVLALCL
LNLEIETIKSVELLEILLLVKKHLKLSDTEFFYWRELVSKCLAEYSSPRCCKPDLKKLVWIVSRRTAQNL
HSSYYSVPELPTIPEGGCFDGSESEDSGEDMSCGEESLSSSPPSDQECTFFFDFQVAQTLCFPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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