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Report for CCDS19219.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19219.1 Public Mus musculus 5 Grk4 23 108 98 CCDS HistoryNCBI Gene:14772Re-query CCDS DB by CCDS ID:19219.1Re-query CCDS DB by GeneID:14772See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19219.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001112.13 ENSMUSP00000001112.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001112.13Link to Ensembl Protein Viewer:ENSMUSP00000001112.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000001112Re-query CCDS DB by Protein ID:ENSMUSP00000001112
Original member NCBI NM_019497.2 NP_062370.2 Updated not alive Link to Nucleotide Sequence:NM_019497.2Link to Protein Sequence:NP_062370.2Re-query CCDS DB by Nucleotide ID:NM_019497Re-query CCDS DB by Protein ID:NP_062370
Current member NCBI NM_019497.3 NP_062370.2 Accepted alive Link to Nucleotide Sequence:NM_019497.3Link to Protein Sequence:NP_062370.2Re-query CCDS DB by Nucleotide ID:NM_019497Re-query CCDS DB by Protein ID:NP_062370Link to BLAST:NP_062370.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_062370.2 574 O70291 574 100% 0 0

Chromosomal Locations for CCDS 19219.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 34660953 34661004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34669110 34669202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34674534 34674646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34676110 34676184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34694747 34694853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34710133 34710225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34711698 34711761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34716189 34716329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34719701 34719891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34730005 34730042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34731481 34731570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34745163 34745371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34748179 34748316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34751555 34751692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34752136 34752267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 34755144 34755194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1725 nt):
ATGGAACTCGAGAACTTCGTGGCCAACAATCTGTTGCTGAAGGCCCGTCTAGGATTTAACAAACAGACTG
GTCGTAGTAAAAAATGGAGAGAGCTCCTGAAGTTTCCCCCAGTCAGCATGTGCACTGAATTAAGATGGTC
CATCGAAAAGGATTTTAGCAGTCTTTGCGACAAACAGCCAATTGGAAGACTTCTTTTTAGACAATTCTGT
GATACAAAACCAGATCTAAAAAGGTGCATTGAATTCTTGGATGCAGTGGCAGAGTACGAAGTTACCATTG
AAGAGGAACAAAGAGAATTTGGACTAGCCATCTTCAGTAGATTCTTCAAAGAGAAGTCAGAAGTCCCCTT
ACCAGAGATACCTCCAGATATTGTGAAAGAGTGTAAATGGAATCTGAAGCAGAATTCTCCCTCTCAAAAT
GTTTTCGAAGAATGTGCTGGAATTGTCTGTAAGTATTTGAGTGAAACACCATTTGAAGAATACCAAGAAA
GTACCTACTTTAATCGATTTTTACAATGGAAATGGCTAGAAAGGCGTCCAGTAACAAAGAACACATTCAG
ACAATATAGAGTTCTAGGAAAAGGCGGATTTGGAGAGGTTTGTGCCTGTCAAGTACGAGCTACAGGAAAA
ATGTATGCCTGCAAAAAACTAGAAAAAAAAAGAATAAAGAAGAGGAAAGGTGAAGCCATGGCTCTGAATG
AAAAAAGAATCTTAGAAAAATTGCATAGTAGATTTGTAGTTAGTTTAGCCTACACTTATGAAACCAAGGA
TGCTTTGTGTTTGGTGCTAACCATAATGAATGGAGGGGATTTGAAGTACCACATTTACAACCTGGGTGAT
CCTGGCTTTGAGGAGCCGAGAGCTGTGTTCTATGCTGCAGAGCTGTGCTGTGGCTTGGAAGATTTACAGA
GGAAAAGAATTGTATACAGAGACCTAAAGCCAGAGAATATCCTCCTTGATGATCATGGACACATCCGAAT
TTCAGATCTTGGTCTAGCTATGGAAGTCCCAGAAGGGGAGATGGTACGAGGAAGAGTTGGTACTGTTGGC
TACATGGCTCCAGAAATTATCAATCATGAAAAGTATACATTTAGTCCTGACTGGTGGGGACTTGGCTGTT
TGATATATGAAATGATTGCGGGACATTCTCCATTCAGAAAATATAAAGAAAAAGTCAACCGGGAGGAATT
GGAAAGAAGAGTGAAGAATGAAACTGAGGAGTACTCTGAGAGGTTTTCAGAGGATGCCAAGTCCATCTGC
AGCATGTTACTCATCAAAGATCCAAGTAAGAGACTGGGCTGCCAGAGGGATGGAGTCTCTGCTGTAAAGC
AGCACCCAATATTCAAGGATATAAACTTCAGCAGGCTGGAAGCAAATATGTTAGATCCACCTTTCATTCC
TGATCCTCAGGCCATTTATTGTAGGAACATCTTGGATATTGGGCAGTTCTCTGTGGTGAAAGGAGTCAAC
CTGGATACCAATGATGAAATCTTCTACGCTGAATTTGCGACAGGGTCTGTCACCATCCCCTGGCAGAATG
AGATGATTGAATCTGGATGTTTCAAGGATCTCAATGAAAATGAAGACGATTTGTCATCACTTGAAAAATA
CAAGATGTGTTCCTCCATTCTCAGACCAAAGAGAAACTTCTTCCGTAGACTCTTCAGAAGAACGGGCTGC
CTGAACATTGCCCTCAGTGAGGAGAGGGAGCCAACAGAACACTGA

Translation (574 aa):
MELENFVANNLLLKARLGFNKQTGRSKKWRELLKFPPVSMCTELRWSIEKDFSSLCDKQPIGRLLFRQFC
DTKPDLKRCIEFLDAVAEYEVTIEEEQREFGLAIFSRFFKEKSEVPLPEIPPDIVKECKWNLKQNSPSQN
VFEECAGIVCKYLSETPFEEYQESTYFNRFLQWKWLERRPVTKNTFRQYRVLGKGGFGEVCACQVRATGK
MYACKKLEKKRIKKRKGEAMALNEKRILEKLHSRFVVSLAYTYETKDALCLVLTIMNGGDLKYHIYNLGD
PGFEEPRAVFYAAELCCGLEDLQRKRIVYRDLKPENILLDDHGHIRISDLGLAMEVPEGEMVRGRVGTVG
YMAPEIINHEKYTFSPDWWGLGCLIYEMIAGHSPFRKYKEKVNREELERRVKNETEEYSERFSEDAKSIC
SMLLIKDPSKRLGCQRDGVSAVKQHPIFKDINFSRLEANMLDPPFIPDPQAIYCRNILDIGQFSVVKGVN
LDTNDEIFYAEFATGSVTIPWQNEMIESGCFKDLNENEDDLSSLEKYKMCSSILRPKRNFFRRLFRRTGC
LNIALSEEREPTEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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