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Report for CCDS18744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18744.1 Public Mus musculus 4 Map3k6 23 108 98 CCDS HistoryNCBI Gene:53608Re-query CCDS DB by CCDS ID:18744.1Re-query CCDS DB by GeneID:53608See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18744.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030677.6 ENSMUSP00000030677.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030677.6Link to Ensembl Protein Viewer:ENSMUSP00000030677.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000030677Re-query CCDS DB by Protein ID:ENSMUSP00000030677
Original member Current member NCBI NM_016693.5 NP_057902.5 Accepted alive Link to Nucleotide Sequence:NM_016693.5Link to Protein Sequence:NP_057902.5Re-query CCDS DB by Nucleotide ID:NM_016693Re-query CCDS DB by Protein ID:NP_057902Link to BLAST:NP_057902.5

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057902.5 1291 Q9WTR2 1291 99.5352% 0 6

Chromosomal Locations for CCDS 18744.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 133241089 133241431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133242818 133242957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133243053 133243076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133243311 133243501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133243675 133243843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133244982 133245088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133245506 133245676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133245778 133245890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133246258 133246417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133246630 133246792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133246875 133246982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133247080 133247129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133247202 133247297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133247414 133247501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133247581 133247714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133248013 133248140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133248388 133248524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133248792 133248897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133249662 133249819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133249930 133250122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133250208 133250346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133250649 133250805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133250924 133251100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133251342 133251447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133251611 133251773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133251859 133251971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133252055 133252128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133252400 133252476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 133252652 133252742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3876 nt):
ATGGCGGGGCCATGTCCTGGGGCCGGGGTTCTAGAACGGGCGGGCAGCTGCTGGCAGGACCCGCTGGCGG
AGGCGCTGAGCCGGGGCCGCTCGTCTCCTGCGGTCACGGGTCGGGGCTGCGCGCGGAGCCGGCCTCTCAG
TGTGGTCTACGTGCTGACCCGGGAGCCGGGGCTCGGGGTGGAGCCCGGGTCGGGAACCGAGGCAGAGCCG
CTGCCGTTGCGATGCCTGCGCGAGGCCTGCGCTCAGCTCCAGGGCACACGGCCACCCCCGCAGCTACGCA
GCCTACCCTTTGCGACGCTGGCGCTAGGCGACACCGCTGCGCTGGACTCCTTCTACAACGCGGATGTAGT
GGTGCTGGAGGTGAGCAGCTCCCTGGCACAGCCTTCCTTGTTCTACCACCTCGGCGTGCGTGAGAGCTTC
AGCATGACCAACAACGTGCTCCTCTGTTCCCAGGCAGAGCTCCCTGATCTGCAGGCCCTTCGTGAGGATG
TTTTCCAGAAGAACTCGGATTGTGTTGGCAGCTACACACTGATTCCTTATGTGGTGACAGCCACTGGCCG
GGTCTTATGTGGCGATGCAGGCCTCCTGAGGGGCATAGCCGATGGGCTAGTACAGGCTGGGGCGGGCACT
GAAGCCCTCCTCACTCCCCTGGTGGGCCGGCTTGTCCGTCTGTTGGAGGCTACACCCACAGACTCTTGCG
GCTATTTCCGGGAGACCATTCGTCAGGATATCCGGCAGGCTCGGGAGCGATTCAGTGGGCAGCAGCTGAG
GCAGGAGCTGGCTCGCCTGCAGCGGAGGCTGGACAGCGTGGAGCTGCTGAGCCCTGACATTGTCATGAAT
CTGCTGCTATCGTACCGTGATGTCCAGGACTACTCGGCCATCATTGAGCTGGTGGAGACGCTGCAGGCTT
TGCCCACCTGTGATGTGGCTGAACAGCACAATGTCTGCTTTCACTACACATTTGCCCTCAACAGGAGGAA
CAGGCCTGGGGACCGGGAGAAAGCCCTGGCTGTCCTGCTGCCATTGGTGAAGTATGAAGGTCCCGTGGCT
CCGGATCTGTACTGCATGTGTGGTCGTATCTACAAGGACATGTTCTTCACTTCTGGCTTCCAAAATGCCG
GCCACCTGGAGCAGGCCTATCACTGGTACCGCAAGGCGTTTGATGTGGAGCCCAGCCTGCACTCAGGCAT
CAATGCAGCTGTTCTCCTCATTGCAGCTGGGCAGCATTTCGAAGACTCTGAGGAGCTCCGGCTGATTGGC
ATGAAGCTGGCCTGCCTGCTAGCCCGCAAAGGCTGTGTGGAGAAGATGCAGTACTACTGGGATGTGGGAT
TCTACCTGGGAGCCCAGATTCTTGCCAACGACCCCATCCAGGTGGTGCTGGCTGCAGAGCAACTGTACAA
GCTTAATGCCCCCATTTGGTACTTGGTCTCCGTGATGGAGACCTTCCTACTGTACCAGCATTTCAGACCC
ACACCAGAGCCCTCAGGAGGACCCCCGCTGCGAGCTCACTTCTGGCTCCACTTCCTGCTACAATCTTGCC
AGCCTTTCAAGATGGCTCCTCCTCAGGAGGACCAGTGCCTGGTACTGGTGCTGGAGATAAACAAGGTCCT
GCTGCCTGCCAGGCTTGAGATTCAGGGAACAGACCCCGTGAGCACAGTGACCCTAAGCTTGCTGGACCCA
GAGACTCAGGAGGATCCTTCCAGCTGGACCTTCCCAGTCACCTCCATCTGTGGGATCAGCACCTCCAAGC
TGGACCAGCGCTGCTGCTTCCTGTACGCACTTCCTCCGGCCCAGGACGTCCAGCTGTGCTTTCCCAGTGT
GGAGCGCTGCCAGCGGTTCTGTGGCCTAATTCAGGTCTTGGTGATGAATCCGGATTCCTCCGCGCCCACT
GAGGAGGCAGAAGGCGCAAGGGAGGTGCTGGAGTTTGATTATGAATACTCGGAGACTGGTGAGCGGCTGG
TGTTGGGCAGAGGCACGTATGGGGTGGTGTATGCTGGCCGAGACAGGCACACGAGGGTACGAATCGCCAT
CAAGGAGATCCCAGAGAGAGATAGCAGATTCTCTCAGCCTCTGCATGAAGAGATCGCTCTTCACAAACGA
CTTCGTCATAAGAATATTGTGCGTTATCTGGGCTCAGCCAGCCAGGGCGGCTACCTCAAGATCTTCATGG
AGGAAGTGCCTGGAGGCAGCCTGTCCTCCTTGCTTAGGTCAGTGTGGGGACCCCTAAAGGACAACGAGAG
CACTATTAGCTTCTATACACGTCAGATCCTACAAGGACTCAGCTACCTCCATGAGAACCGTATCGTTCAC
AGAGACATCAAGGGAGACAATGTTCTGATCAACACCTTCAGTGGGCTGCTCAAGATTTCTGACTTTGGCA
CCTCTAAGCGGCTGGCAGGCATCACACCGTGCACGGAGACTTTCACAGGGACTCTGCAGTATATGGCCCC
GGAAATCATCGACCAGGGCCCGCGAGGATATGGGAAGGCAGCTGACATCTGGTCTCTGGGCTGCACTGTA
ATCGAGATGGCAACAGGTCGACCGCCCTTCCATGAACTAGGGAGCCCTCAGGCTGCGATGTTTCAGGTGG
GCATGTACAAGGTACATCCACCCGTGCCCGGTTCCCTGTCAGCTGAGGCCCAAGCCTTCCTCCTCCGAAC
TTTTGAGCCAGATCCCCGCCTCCGAGCCAGTGCCCAAGAGCTGCTGGGAGACCCCTTCCTTCAGCCAGGA
AAGAGGAGCCGCAGCCCGGGCTCTCCTCGGCATACTCCCCGGCCCTCAGGCGCCCCTTCCGGTCCTTCCA
GTCCTTCAGCTGACTCAGCCACACAGTCTCAGACATTCCCAAGGCCCCAGGCACCCTCTCAGCACCCACC
CAGCCCCCCAAAGCGCTGCCTTAGTTATGGGGACACCAGTCAGCTCCGTGTGCCCGAGGAGCCCGCTGCC
GAGGAACCCGCGTCCCCAGAAGAGAGTTCAGGCCTGAGTCTGCTGCACCAGGAGAGCAAGCGCCGGGCCA
TGCTGGCTGCGGTGCTGGAACAGGAGGTGCCCACACTAGCAGAGAATCTCCTGGAACAGGAACAGGACTC
TCGACTCAGCAAGATTCATGTGGAACTTCTGCTTCGGTGCCTTGGGGCACAAATCCACACTCCTAACCGC
CGGCAGCTGGCCCAGGAGCTGCGGACCCTGCAAGCTCAGCTGCGGGCCCAGAGCCTGGGCCCTGCGCTTT
TGAAGGGGCCGCTCTTCGCCTTTCCAGACGCGGTGAAGCAGATCCTCCGCAGACGCCAGATCCGCCCACA
CTGGATGTTCGTGTTGGACTCGCTGCTCAGCCGTGCAGTCCGGGCGGCGATGGCGGTGCTGGACGCGGAG
TCGGAGAAGAAAGCGGTCTTACCGAGGTCAGAAGAGTCGAGTAAAGAGGAGTCCCAGCAGAAACCTCAGG
AGAGCCAGGCGCTGCAGAGCCAGCTCCCACCAGAGCAGGGACCCCCATCGTTGATGGTGGAGTTGGGCCT
TTTGCGAGCCGAGACTGACAGGCTTCGGGACCTTCTGGCTGAGAAGGAACGTGAGTGCCAGGCGCTGGTG
CAACAGGCCCTGCATCGGGTGCATGCAGAGACCAGGAAGTATGCCCCAGCTTCAGAGACCCCAGCCACTC
TCCCAAAGGACCAGAACCTGGTGCGGTGGCTACAGGAACTGAGTGTAGATCCAGCCACTATCCAAACGCT
CCTGAGTCATAGCTTCACCCTTCAAACCCTGCTCACCTGTGCCACTCAAGATGATCTAGTGTACACCAGA
ATCAGGGGAGGGATGGTATGCCGGATTTGGAGAGCCATCTTGGCACAGCGAGCAGGAGCCACATCGGTCA
CCCCAGTACCCCGGGACGCTGAGTGA

Translation (1291 aa):
MAGPCPGAGVLERAGSCWQDPLAEALSRGRSSPAVTGRGCARSRPLSVVYVLTREPGLGVEPGSGTEAEP
LPLRCLREACAQLQGTRPPPQLRSLPFATLALGDTAALDSFYNADVVVLEVSSSLAQPSLFYHLGVRESF
SMTNNVLLCSQAELPDLQALREDVFQKNSDCVGSYTLIPYVVTATGRVLCGDAGLLRGIADGLVQAGAGT
EALLTPLVGRLVRLLEATPTDSCGYFRETIRQDIRQARERFSGQQLRQELARLQRRLDSVELLSPDIVMN
LLLSYRDVQDYSAIIELVETLQALPTCDVAEQHNVCFHYTFALNRRNRPGDREKALAVLLPLVKYEGPVA
PDLYCMCGRIYKDMFFTSGFQNAGHLEQAYHWYRKAFDVEPSLHSGINAAVLLIAAGQHFEDSEELRLIG
MKLACLLARKGCVEKMQYYWDVGFYLGAQILANDPIQVVLAAEQLYKLNAPIWYLVSVMETFLLYQHFRP
TPEPSGGPPLRAHFWLHFLLQSCQPFKMAPPQEDQCLVLVLEINKVLLPARLEIQGTDPVSTVTLSLLDP
ETQEDPSSWTFPVTSICGISTSKLDQRCCFLYALPPAQDVQLCFPSVERCQRFCGLIQVLVMNPDSSAPT
EEAEGAREVLEFDYEYSETGERLVLGRGTYGVVYAGRDRHTRVRIAIKEIPERDSRFSQPLHEEIALHKR
LRHKNIVRYLGSASQGGYLKIFMEEVPGGSLSSLLRSVWGPLKDNESTISFYTRQILQGLSYLHENRIVH
RDIKGDNVLINTFSGLLKISDFGTSKRLAGITPCTETFTGTLQYMAPEIIDQGPRGYGKAADIWSLGCTV
IEMATGRPPFHELGSPQAAMFQVGMYKVHPPVPGSLSAEAQAFLLRTFEPDPRLRASAQELLGDPFLQPG
KRSRSPGSPRHTPRPSGAPSGPSSPSADSATQSQTFPRPQAPSQHPPSPPKRCLSYGDTSQLRVPEEPAA
EEPASPEESSGLSLLHQESKRRAMLAAVLEQEVPTLAENLLEQEQDSRLSKIHVELLLRCLGAQIHTPNR
RQLAQELRTLQAQLRAQSLGPALLKGPLFAFPDAVKQILRRRQIRPHWMFVLDSLLSRAVRAAMAVLDAE
SEKKAVLPRSEESSKEESQQKPQESQALQSQLPPEQGPPSLMVELGLLRAETDRLRDLLAEKERECQALV
QQALHRVHAETRKYAPASETPATLPKDQNLVRWLQELSVDPATIQTLLSHSFTLQTLLTCATQDDLVYTR
IRGGMVCRIWRAILAQRAGATSVTPVPRDAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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