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Report for CCDS18529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18529.1 Public Mus musculus 4 Plk3 23 108 98 CCDS HistoryNCBI Gene:12795Re-query CCDS DB by CCDS ID:18529.1Re-query CCDS DB by GeneID:12795See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18529.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000076859.11 ENSMUSP00000076130.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000076859.11Link to Ensembl Protein Viewer:ENSMUSP00000076130.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000076859Re-query CCDS DB by Protein ID:ENSMUSP00000076130
Original member Current member NCBI NM_013807.3 NP_038835.2 Accepted alive Link to Nucleotide Sequence:NM_013807.3Link to Protein Sequence:NP_038835.2Re-query CCDS DB by Nucleotide ID:NM_013807Re-query CCDS DB by Protein ID:NP_038835Link to BLAST:NP_038835.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038835.2 648 Q60806-2 648 99.6914% 0 2

Chromosomal Locations for CCDS 18529.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 117128987 117129178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117129286 117129399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117129960 117130089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117130243 117130405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117130508 117130591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117130724 117130817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117131062 117131153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117131373 117131499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117131610 117131808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117131901 117131996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117132727 117132814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117132905 117133034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117133189 117133305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117133395 117133502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 117133652 117133864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1947 nt):
ATGGAGCCCGCCGCCGGCTTCTTGTCTCCGCGCCCCTTCCCGCGCGCGGCTGCCCCGTCCGCGCCCCCCG
CCGGCCCGGGGCCGCCTGCCAATGCCTCCCCGCGATCGGAACCTGAGGTGCTGGCCGGGCCACGGGCGCC
GGATCCTCCTGGTCGCCTCATCACCGACCCTCTCAGCGGCCGTACCTACACCAAGGGTCGCTTGTTGGGC
AAGGGGGGCTTCGCACGCTGCTATGAAGCCACTGACACCGAGTCTGGTATAGCCTACGCGGTCAAAGTCA
TCCCACAGAGTCGCGTCGCCAAGCCGCATCAGCGCGAGAAGATCCTAAATGAGATAGAGTTGCACCGAGA
CCTACAGCACCGCCATATCGTTCGCTTTTCACATCATTTCGAGGATGCTGACAACATATACATTTTCCTG
GAGCTCTGTAGCCGAAAGTCCCTGGCCCACATCTGGAAGGCCCGACACACCCTGTTGGAACCAGAGGTTC
GCTACTACCTGCGCCAGATCCTTTCTGGCCTCAAGTACTTGCACCAGAGGGGTATCTTACACAGAGATCT
CAAGCTGGGAAATTTTTTCATCACGGATAACATGGAACTGAAGGTGGGGGATTTTGGGCTGGCAGCTCGA
TTAGAGCCCCCAGAGCAGAGGAAAAAGACCATCTGTGGCACTCCCAACTACGTGGCTCCAGAAGTGCTGC
TGAGACAGGGCCATGGCCCCGAGGCAGATGTGTGGTCGCTTGGTTGTGTCATGTACACGCTCCTGTGTGG
GAGCCCCCCATTTGAGACTGCTGACCTGAAGGAGACATACCGCTGCATCAAGCAGGTTCATTACACGCTA
CCTGCCAGCCTCTCCCTGCCTGCCCGGCAGCTCCTGGCTGCCATCCTCCGAGCTTCACCCAGAGACCGCC
CTTCCATTGAACAGATTTTACGCCATGACTTCTTTACGAAGGGCTACACCCCTGATCGGCTCCCGGTCAG
CAGCTGTGTGACAGTCCCAGATCTGACACCCCCCAACCCTGCGAGGAGTCTGTTTGCCAAAGTTACCAAG
AGCCTGTTTGGCAGGAAAAAGAACAAGAATAAGAACCATTCTGAGGACCAGGATAATGTCTCCTGCTTGG
TGAGTGGCCTCATGCGCACATCCATCGGTCATCCAGATGTCAGGCCGGAGGCTCCTGTAGTTTCAGGCCA
GGCCCCTGCCAGCTTGGTAGAGACAGCTGCCGAGGACAGCTCGCCCCGTGGGACACTGGCCAGCAGTGGA
GATGGGTTTGAAGAAGGTTTGACTGTGGCCACAGTGGTAGAGTCTGCCCTCTGTGCACTGAGAAACTGTG
TGGCCTTCATGCCCCCAGCCGAACAGAACCCAGCCCCGCTGGCACAGCCAGAGCCTCTGGTGTGGGTCAG
CAAGTGGGTTGACTACTCCAACAAGTTTGGCTTTGGCTATCAGCTGTCCAGCCGCCGTGTAGCCGTGCTC
TTCAATGATGGCACACACATGGCCCTGTCAGCCAATAGGAAGACGGTGCACTACAACCCCACCAGCACGA
AGCACTTCTCCTTCTCCATGGGTTCTGTGCCCCGAGCTCTGCAGCCTCAGCTGGGCATCCTGCGGTATTT
TGCGTCCTACATGGAACAGCACCTCATGAAGGGTGGAGATCTGCCCAGTGTGGAAGAGGCGGAGGTGCCT
GCCCCACCCTTGCTGCTGCAGTGGGTCAAGACTGACCAGGCCCTCCTCATGCTGTTCAGTGATGGCACTG
TCCAGGTGAACTTCTACGGGGACCACACGAAGCTGATCCTCAGTGGCTGGGAGCCTCTCCTTGTGACCTT
CGTGGCCCGCAATCGCAGTGCTTGTACTTACCTCGCTTCCCACCTCCGGCAGCTGGGCTGCTCCCCAGAC
TTGCGGCAGCGACTGCGCTACGCTCTGCGCCTGCTCAGGGACCAAAGCCCTGCTTAG

Translation (648 aa):
MEPAAGFLSPRPFPRAAAPSAPPAGPGPPANASPRSEPEVLAGPRAPDPPGRLITDPLSGRTYTKGRLLG
KGGFARCYEATDTESGIAYAVKVIPQSRVAKPHQREKILNEIELHRDLQHRHIVRFSHHFEDADNIYIFL
ELCSRKSLAHIWKARHTLLEPEVRYYLRQILSGLKYLHQRGILHRDLKLGNFFITDNMELKVGDFGLAAR
LEPPEQRKKTICGTPNYVAPEVLLRQGHGPEADVWSLGCVMYTLLCGSPPFETADLKETYRCIKQVHYTL
PASLSLPARQLLAAILRASPRDRPSIEQILRHDFFTKGYTPDRLPVSSCVTVPDLTPPNPARSLFAKVTK
SLFGRKKNKNKNHSEDQDNVSCLVSGLMRTSIGHPDVRPEAPVVSGQAPASLVETAAEDSSPRGTLASSG
DGFEEGLTVATVVESALCALRNCVAFMPPAEQNPAPLAQPEPLVWVSKWVDYSNKFGFGYQLSSRRVAVL
FNDGTHMALSANRKTVHYNPTSTKHFSFSMGSVPRALQPQLGILRYFASYMEQHLMKGGDLPSVEEAEVP
APPLLLQWVKTDQALLMLFSDGTVQVNFYGDHTKLILSGWEPLLVTFVARNRSACTYLASHLRQLGCSPD
LRQRLRYALRLLRDQSPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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