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Report for CCDS18501.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18501.1 Public Mus musculus 4 Faah 23 108 98 CCDS HistoryNCBI Gene:14073Re-query CCDS DB by CCDS ID:18501.1Re-query CCDS DB by GeneID:14073See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18501.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049095.5 ENSMUSP00000041543.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049095.5Link to Ensembl Protein Viewer:ENSMUSP00000041543.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000049095Re-query CCDS DB by Protein ID:ENSMUSP00000041543
Original member NCBI NM_010173.5 NP_034303.3 Updated not alive Link to Nucleotide Sequence:NM_010173.5Link to Protein Sequence:NP_034303.3Re-query CCDS DB by Nucleotide ID:NM_010173Re-query CCDS DB by Protein ID:NP_034303
Current member NCBI NM_010173.6 NP_034303.3 Accepted alive Link to Nucleotide Sequence:NM_010173.6Link to Protein Sequence:NP_034303.3Re-query CCDS DB by Nucleotide ID:NM_010173Re-query CCDS DB by Protein ID:NP_034303Link to BLAST:NP_034303.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034303.3 579 O08914 579 100% 0 0

Chromosomal Locations for CCDS 18501.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 115998487 115998615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115998821 115998966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 115999499 115999607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116000049 116000088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116000787 116000827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116001104 116001203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116002458 116002555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116002977 116003102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116004355 116004479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116004714 116004754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116005000 116005206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116005301 116005434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116005587 116005721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116008180 116008293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116017463 116017657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1740 nt):
ATGGTGCTGAGCGAAGTGTGGACCGCGCTGTCTGGACTCTCCGGGGTTTGCCTAGCCTGCAGCTTGCTGT
CGGCGGCGGTGGTCCTGCGATGGACCAGGAGCCAGACCGCCCGGGGCGCGGTGACCAGGGCGCGGCAGAA
GCAGCGAGCCGGCCTGGAGACCATGGACAAGGCGGTGCAGCGCTTCCGGCTGCAGAATCCTGACCTGGAT
TCAGAGGCCTTGCTGGCTCTGCCCCTGCTCCAACTGGTACAGAAGTTACAGAGTGGGGAACTGTCCCCAG
AAGCTGTGCTCTTTACCTACCTGGGAAAGGCCTGGGAAGTGAACAAAGGGACCAACTGTGTGACCTCCTA
TCTGACTGACTGTGAGACTCAGCTGTCCCAGGCCCCACGGCAGGGCCTGCTCTATGGCGTCCCCGTGAGC
CTCAAGGAATGCTTCAGCTACAAGGGCCATGCTTCCACACTGGGCTTAAGTTTGAACGAGGGTGTGACAT
CGGAGAGTGACTGTGTGGTGGTGCAGGTACTGAAGCTGCAGGGAGCTGTGCCCTTTGTGCACACCAACGT
CCCCCAGTCCATGCTAAGCTATGACTGCAGTAACCCCCTCTTTGGCCAGACCATGAACCCGTGGAAGCCC
TCCAAGAGTCCAGGAGGTTCCTCAGGGGGTGAGGGGGCTCTCATTGGATCTGGAGGCTCCCCTCTGGGTT
TAGGCACTGACATCGGCGGCAGCATCCGGTTCCCTTCTGCCTTCTGTGGCATCTGTGGCCTCAAGCCTAC
TGGGAACCGCCTCAGCAAGAGTGGCCTGAAGAGCTGTGTTTATGGACAGACAGCAGTGCAGCTTTCTGTT
GGCCCCATGGCACGGGATGTGGATAGCCTGGCATTGTGCATGAAAGCCCTACTTTGTGAGGATTTGTTCC
GCTTGGACTCCACCATCCCCCCCTTGCCCTTCAGGGAGGAGATCTACAGAAGTTCTCGACCCCTTCGTGT
GGGATACTATGAAACTGACAACTACACCATGCCCACTCCAGCCATGAGGAGGGCTGTGATGGAGACCAAG
CAGAGTCTCGAGGCTGCTGGCCACACGCTGGTCCCCTTCTTACCAAACAACATACCTTATGCCCTGGAGG
TCCTGTCGGCAGGTGGGCTGTTCAGTGATGGTGGCTGCTCTTTTCTCCAAAACTTCAAAGGCGACTTTGT
GGATCCCTGCTTGGGGGACCTGGTCTTAGTGCTGAAGCTGCCCAGGTGGTTTAAAAAACTGCTGAGCTTC
CTGCTGAAGCCTCTGTTTCCTCGGCTGGCAGCCTTTCTCAACAGTATGTGTCCTCGGTCAGCCGAAAAGC
TGTGGGAACTGCAGCATGAGATTGAGATGTATCGCCAGTCCGTCATTGCCCAGTGGAAGGCAATGAACTT
GGACGTGGTGCTAACCCCCATGCTGGGTCCTGCTCTGGATTTGAACACACCGGGCAGAGCCACAGGGGCT
ATCAGCTACACTGTTCTCTATAACTGCCTGGACTTCCCTGCGGGGGTGGTGCCTGTCACCACTGTGACCG
CTGAGGACGATGCCCAGATGGAACACTACAAAGGCTACTTTGGGGATATGTGGGACAACATTCTGAAGAA
GGGCATGAAAAAGGGTATAGGCCTGCCTGTGGCTGTGCAGTGCGTGGCTCTGCCCTGGCAGGAAGAGCTG
TGTCTGCGGTTCATGCGGGAGGTGGAACGGCTGATGACCCCTGAAAAGCGGCCATCTTGA

Translation (579 aa):
MVLSEVWTALSGLSGVCLACSLLSAAVVLRWTRSQTARGAVTRARQKQRAGLETMDKAVQRFRLQNPDLD
SEALLALPLLQLVQKLQSGELSPEAVLFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQGLLYGVPVS
LKECFSYKGHASTLGLSLNEGVTSESDCVVVQVLKLQGAVPFVHTNVPQSMLSYDCSNPLFGQTMNPWKP
SKSPGGSSGGEGALIGSGGSPLGLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKSCVYGQTAVQLSV
GPMARDVDSLALCMKALLCEDLFRLDSTIPPLPFREEIYRSSRPLRVGYYETDNYTMPTPAMRRAVMETK
QSLEAAGHTLVPFLPNNIPYALEVLSAGGLFSDGGCSFLQNFKGDFVDPCLGDLVLVLKLPRWFKKLLSF
LLKPLFPRLAAFLNSMCPRSAEKLWELQHEIEMYRQSVIAQWKAMNLDVVLTPMLGPALDLNTPGRATGA
ISYTVLYNCLDFPAGVVPVTTVTAEDDAQMEHYKGYFGDMWDNILKKGMKKGIGLPVAVQCVALPWQEEL
CLRFMREVERLMTPEKRPS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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