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Report for CCDS18060.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18060.2 Public Mus musculus 4 Kif24 23 108 98 CCDS HistoryNCBI Gene:109242Re-query CCDS DB by CCDS ID:18060.2Re-query CCDS DB by GeneID:109242See the combined annotation on chromosome 4 in Sequence Viewer

Public Note for CCDS 18060.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and homology data.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 18060.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000108055.8 ENSMUSP00000103690.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108055.8Link to Ensembl Protein Viewer:ENSMUSP00000103690.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000108055Re-query CCDS DB by Protein ID:ENSMUSP00000103690
Original member Current member NCBI NM_024241.2 NP_077203.2 Accepted alive Link to Nucleotide Sequence:NM_024241.2Link to Protein Sequence:NP_077203.2Re-query CCDS DB by Nucleotide ID:NM_024241Re-query CCDS DB by Protein ID:NP_077203Link to BLAST:NP_077203.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077203.2 1356 Q6NWW5-1 1356 100% 0 0

Chromosomal Locations for CCDS 18060.2

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 41392112 41392252 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41392878 41392971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41393438 41395663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41397547 41397656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41400437 41400508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41403790 41403895 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41404677 41404798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41409732 41409819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41413829 41414044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41414902 41414999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41423452 41423635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 41428345 41428958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4071 nt):
ATGGCATCCTGGTTATATGAGTGTCTTTGTGAGGCTGAGCTTGCACAGTATTATCCTCATTTTACTGCGC
TTGGCCTTCAAAAAATAGATGAATTAGCCAAGGTTACAATGAAGGACTACTCCAGATTGGGAGTCCATGA
CATGAACGACCGCAAACGTCTCTTTCAGCTTATCAAAATCATTAAGATTATGCAGGAGGAAGATAAAGCC
CTCGGTATCCCAGAGCATCCTCTTCAGGCAAGCAGCCTGTACACCAAGCCTCGGGAATTCAGATCTGGGC
CCCGAAGACAACTGCATTTTGATTCTCCTTCTGCCAGCAAAGATAAAATGGCCAACAATGAAACAGGCAG
TTTATCCAACTTCTCTGTGGATGAGCAGAAGTCCACTTACCTGAAAGTGCTGGAGCACATGCTACCAGAT
GATTCCCAGTGCCAGACAAAAATAAGAGCCCCGGATGCCTCTGCTGCTGATGCTTCCATGCAAACGGAAA
CCAACGCTCCGCTCTTTTCATCAAATTACTTCTCTCCACAACTGGGAAATTGTGATATTCCCGTTATTCA
AAGAGTCTCTCATGTGTCAGGGTATAACTATGGAATTCCTCATTCTTGTGTCAGGCAGATCACCTCAGAG
AATCCTTGGACTGAAATGGAGAAAATCAGAGTTTGTGTTCGAAAACGGCCTTTAGGTGTAAGGGAAGTAC
GTCGTGGAGAAGTTAATGTTATTACTGTAGAAGATAAAGAAACTCTGCTCGTACATGAGAAAAAAGAAGC
AGTTGACCTTACTCAATATATTCTTCAGCATGTTTTTTATTTTGATGAAGTCTTTGGTGAGGCATGCAGC
AATCAAGATGTATACCTGAAGACTGCTCACCCCCTCATTCAGCATATTTTCAACGGAGGAAGTGCCACTT
GCTTTGCATATGGACAAACAGGTGCGGGGAAAACCTATACCATGATAGGAACTCATCAAAACCCAGGATT
GTATGCTCTGGCTGCCAAAGATATCTTCAGGCAGCTGAAAGTATCCCAGTCAAGAAGGAATCTCTTTGTG
TGGATCAGCTTCTATGAGATCTACTGTGGACAACTTTATGACCTCCTAAATAGAAGAAAACGGCTCTTTG
CAAGAGAAGATAGCAAGCATGTGGTACAGATAGCTGGCCTTCGAGAGCTCCAAGTGGACAGTGTGGAGCT
ACTCCTACAGGTGATCTTAAAGGGCAGCAAGGAGCGCAGCACAGGGGCCACTGGTGTCAACGCAGACTCC
TCCCGTTCCCATGCTATCATCCAAATTCAGATCAAAGATTCAGCCAAGAGGACATTTGGCAGGATCTCTT
TCATTGACTTGGCTGGGAGTGAGAGAGCAGCAGATGCCAGGGACTCAGACAGACAGACAAAGATGGAAGG
CGCGGAGATCAACCAGAGTCTTCTGGCTCTGAAAGAATGTATCCGAGCACTGGACCAGGAACACACCCAC
ACGCCTTTCAGGCAGAGCAAACTGACTCAGGTCCTGAAGGACTCTTTCATTGGCAATGCCAAAACTTGCA
TGATCGCCAACATCTCCCCAAGCCACATAGCCACAGAGCATACATTGAATACCTTGCGCTATGCTGACCG
GGTGAAGGAACTAAAGAAAGGCGTTAAGTGTTGTGCTTCAGCTACCAGTCAGAATCAGACATCTGCAAAC
GCCTCTCCAAAACGAATTCAGAGCTCCCCTGTCACCCTCCCCGGGGACAAGTGCTCCCCCAAAAAAGTTA
AGCTGGGACTTCAGCAGTCACTTACTGTGGCCCCAGGCCCCACAAAAGTTAAAGCCCATCCTTTGGCCAG
CCATGTTCCCAACGTCCCCTTTACCTCTGGACCTAAAACCCCTGGTAAAAAAAGTAGTTCCCGAGGGAGT
CCCACTCCAGAGTGGGACATGAAGGCTAGCCCTCGCAAAGGAACTACGAGATCTGGCCATTCGATAAAAA
AGGGAGCAGAGTCGGCACCACTGTGCTCTGAGAAAAGTCAAATTGGCAGCAAGATTGCTGTTGGGTGGGA
GGGCAGGGCCTCAGACCCAGGAGAAGGTCTGCTGCGTGTCAGGCTGCCCACGAGAGGGAAGAAGGTGCAG
CCAGTCCAGCCAGTGCAGAAGCAGCTCCTGTCCCGACCTCGGCTCCTTGCTAACAGCCACCACTTAGAAG
CCACTCAGGACAGCAAGGTGGGCACACCTGCCGGGCTTGCCCCCGAAGCCTGGACAAACCCCATTCTACA
GCAAAAGGAAAGGGAGGAGCATTTGCGATTCTACCACCAGCAGTTCCAGCAGCCACCGCTCCTCAAGCAG
AAGCTAAATTACCAACCCCTGCAGAGGCTTTTATGCCAGCACAGGCCTTCAGAAGGTCGGCTCCAGAGTG
AGACTGGCTTTCCCCTCCACTCTAACCCTGAGAACCGTGATGGAGCCCAGGCTGAGGACCTTGATGACAG
TGACTTCAGTGAGGATTCTTTCTCGCACGGCTCCAGTCAGCCGGCCATGAAACAGGGGAGCACAGCCTTG
GAAAGGAGCGGAAGTTCCTTCTTCCTTCATCAGGACAGGGAGCACAGCCCTGAGGAGCAGGCAGCAGAAA
GGCAGCAATGTTTGCTTTTCAGCTCTGAGACGGATGGCAGTAAGAAGCGGCCAGCTGACAGCTGGGTGTA
TTCCAGGGACCCCATCATCAGCCACAGAAGAGGAGCACTCAGTCAAAGCCACAGCCCAAGTATGGTATGC
CCAGACTGGAGCAAGGAGGAAGACTCTGCCTCCTCAGGACCTTCTCCTAAGGACAACCGGGCCCAGAAAC
CTTCCTCTTCACAGGTAGATTTTGTGCATCACCAAAAACCGGGTGAAGCTCAAGTCTCTGACATCAGACT
GGAGGCCTTCACAAGTGAGGTTCCTGAGCAAGCTGAGGGCAGCTTGTCATCCCCATCCCCGGAAAATGGG
CTGTCTTTTCCACTGTCCCATGTGGCTGTTTCTGGATCCCCAGACCAAAGAGACAGAGTCTGCACACCAT
TAAGAGAAGTCAGTGAAAACAGAGTGACTCACACTCCAGGAAGAGTGAACAGCAGCACTCCTTTCCAAGA
GGACTCTGGAGAGCAGATACAGATGTGTTCTGCAAATGCTTCTGGACTCATGGCTCCCCTCACTATGTCC
CTCCTGGAGACCCCCTGTCATGAGGACCTTTCGTCCTTGGAGCAAATTGCCCAGGATGGAGCTGGCTATG
GTTTCATGGCTGAGATTGTAGGAGGGCCAGCAGCAGGACACACAGTCCCATCTTATGATCAAGAGGCTGC
TTTGCCAGTGTCTTCAGCTACTGAGTGCCTATGGCTATCTTCATCTCCCCCTGACAATCGGCCTAGTGGT
GATCTTCCAGCTCTGTCCCCGTCACCCATCCACCAGCATTCACCTGACAAATTGCCCGGTAGAGAGGCCT
ACCAGACCAGAAGGCCAATACTCTTGCCTGAGAATCATATGGGTAGTAAGCTATATGATGACCGTGCTGA
AGAGACTGAACTGGGGGGCTCCCTCACATTCCCCAGAAAGCCGTCCTCCAACATACATGCCGGAGTACCC
TATTCTACACCTTTCCTCACCTCATGTACAGGAAGTAGTAATGGAGTTGGCCGTCCCTGGGCCCAGGAGA
GAAAACATCCTACAGGGGTTAGCTGCCAGGAGCTTGTTTCCTCTACAGATTCCAACAAGCCTCATTACAA
CGAGGACATCGCATGGCTCAGGCACAGGCCAATCTCAAGGTGCTTAGATTCAGACTCTCCTGTGGTCCCC
AGCTGTTCTTCCAAGGCCTTGAGGACATATTGTCCACTTACACCGGAGCAGGCACAGCAGGTGATTATCC
GTGCACACAAAGAACAGCTGGATGAAATGGCTGAGCTGGACTTGAAGGAGGAGACCTTAATGACCCAGAT
GGATTCTAATGATTTTGAAGATTTTGTGACCCAGCTGGATGAAATCATGGCTTTGAAGTCCAGGTGCATC
CAAAGTCTGAGAAGCCAGCTACAGCTCTACCTCACCAGCCACAGGCCCGCTGCAGCCCCCGAAAGAACTG
TGGTGTCTTAG

Translation (1356 aa):
MASWLYECLCEAELAQYYPHFTALGLQKIDELAKVTMKDYSRLGVHDMNDRKRLFQLIKIIKIMQEEDKA
LGIPEHPLQASSLYTKPREFRSGPRRQLHFDSPSASKDKMANNETGSLSNFSVDEQKSTYLKVLEHMLPD
DSQCQTKIRAPDASAADASMQTETNAPLFSSNYFSPQLGNCDIPVIQRVSHVSGYNYGIPHSCVRQITSE
NPWTEMEKIRVCVRKRPLGVREVRRGEVNVITVEDKETLLVHEKKEAVDLTQYILQHVFYFDEVFGEACS
NQDVYLKTAHPLIQHIFNGGSATCFAYGQTGAGKTYTMIGTHQNPGLYALAAKDIFRQLKVSQSRRNLFV
WISFYEIYCGQLYDLLNRRKRLFAREDSKHVVQIAGLRELQVDSVELLLQVILKGSKERSTGATGVNADS
SRSHAIIQIQIKDSAKRTFGRISFIDLAGSERAADARDSDRQTKMEGAEINQSLLALKECIRALDQEHTH
TPFRQSKLTQVLKDSFIGNAKTCMIANISPSHIATEHTLNTLRYADRVKELKKGVKCCASATSQNQTSAN
ASPKRIQSSPVTLPGDKCSPKKVKLGLQQSLTVAPGPTKVKAHPLASHVPNVPFTSGPKTPGKKSSSRGS
PTPEWDMKASPRKGTTRSGHSIKKGAESAPLCSEKSQIGSKIAVGWEGRASDPGEGLLRVRLPTRGKKVQ
PVQPVQKQLLSRPRLLANSHHLEATQDSKVGTPAGLAPEAWTNPILQQKEREEHLRFYHQQFQQPPLLKQ
KLNYQPLQRLLCQHRPSEGRLQSETGFPLHSNPENRDGAQAEDLDDSDFSEDSFSHGSSQPAMKQGSTAL
ERSGSSFFLHQDREHSPEEQAAERQQCLLFSSETDGSKKRPADSWVYSRDPIISHRRGALSQSHSPSMVC
PDWSKEEDSASSGPSPKDNRAQKPSSSQVDFVHHQKPGEAQVSDIRLEAFTSEVPEQAEGSLSSPSPENG
LSFPLSHVAVSGSPDQRDRVCTPLREVSENRVTHTPGRVNSSTPFQEDSGEQIQMCSANASGLMAPLTMS
LLETPCHEDLSSLEQIAQDGAGYGFMAEIVGGPAAGHTVPSYDQEAALPVSSATECLWLSSSPPDNRPSG
DLPALSPSPIHQHSPDKLPGREAYQTRRPILLPENHMGSKLYDDRAEETELGGSLTFPRKPSSNIHAGVP
YSTPFLTSCTGSSNGVGRPWAQERKHPTGVSCQELVSSTDSNKPHYNEDIAWLRHRPISRCLDSDSPVVP
SCSSKALRTYCPLTPEQAQQVIIRAHKEQLDEMAELDLKEETLMTQMDSNDFEDFVTQLDEIMALKSRCI
QSLRSQLQLYLTSHRPAAAPERTVVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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