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Report for CCDS17816.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17816.1 Public Mus musculus 3 Myoz2 23 108 98 CCDS HistoryNCBI Gene:59006Re-query CCDS DB by CCDS ID:17816.1Re-query CCDS DB by GeneID:59006See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17816.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029761.13 ENSMUSP00000029761.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029761.13Link to Ensembl Protein Viewer:ENSMUSP00000029761.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000029761Re-query CCDS DB by Protein ID:ENSMUSP00000029761
Original member Current member NCBI NM_021503.2 NP_067478.1 Accepted alive Link to Nucleotide Sequence:NM_021503.2Link to Protein Sequence:NP_067478.1Re-query CCDS DB by Nucleotide ID:NM_021503Re-query CCDS DB by Protein ID:NP_067478Link to BLAST:NP_067478.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067478.1 264 Q9JJW5 264 100% 0 0

Chromosomal Locations for CCDS 17816.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 123006383 123006617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123013600 123013783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123016549 123016678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123026063 123026232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123034192 123034267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGCTATCACATAGTGCCATGGTGAAGCAAAGGAAACAGCAAGCATCAGCCATCACGAAGGAAATCCATG
GACATGATGTTGACGGCATGGACCTGGGCAAAAAAGTTAGCATCCCCAGAGACATCATGATAGAAGAATT
GTCCCATTTCAGTAATCGTGGGGCCAGGCTGTTTAAGATGCGTCAAAGAAGATCTGACAAATACACCTTT
GAAAATTTCCAGTATGAATCTAGAGCACAAATTAATCACAATATCGCCATGCAGAATGGGAGAGTTGATG
GAAGCAACCTGGAAGGTGGCTCACAGCAAGGCCCCTCAACTCCGCCCAACACCCCCGATCCACGAAGCCC
CCCAAATCCAGAGAACATCGCACCAGGATATTCTGGACCACTGAAGGAAATTCCTCCTGAAAGGTTTAAC
ACGACGGCCGTTCCTAAGTACTACCGGTCTCCATGGGAGCAGGCGATTGGCAGCGATCCGGAGCTCCTGG
AGGCTTTGTACCCAAAACTTTTCAAGCCTGAAGGAAAAGCAGAACTGCGGGATTACAGGAGCTTTAACAG
GGTTGCCACTCCATTTGGAGGTTTTGAAAAAGCATCAAAAATGGTCAAATTCAAAGTTCCAGATTTTGAA
CTACTGCTGCTGACAGATCCCAGGTTCTTGGCCTTTGCCAATCCTCTTTCGGGCAGACGATGCTTTAACA
GGGCGCCAAAGGGGTGGGTATCTGAGAATATCCCCGTCGTGATCACAACTGAGCCTACAGAAGACGCCAC
TGTACCGGAATCAGATGACCTGTGA

Translation (264 aa):
MLSHSAMVKQRKQQASAITKEIHGHDVDGMDLGKKVSIPRDIMIEELSHFSNRGARLFKMRQRRSDKYTF
ENFQYESRAQINHNIAMQNGRVDGSNLEGGSQQGPSTPPNTPDPRSPPNPENIAPGYSGPLKEIPPERFN
TTAVPKYYRSPWEQAIGSDPELLEALYPKLFKPEGKAELRDYRSFNRVATPFGGFEKASKMVKFKVPDFE
LLLLTDPRFLAFANPLSGRRCFNRAPKGWVSENIPVVITTEPTEDATVPESDDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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