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Report for CCDS17377.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17377.1 Public Mus musculus 3 P2ry1 23 108 98 CCDS HistoryNCBI Gene:18441Re-query CCDS DB by CCDS ID:17377.1Re-query CCDS DB by GeneID:18441See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17377.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000029331.6 ENSMUSP00000029331.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000029331.6Link to Ensembl Protein Viewer:ENSMUSP00000029331.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000029331Re-query CCDS DB by Protein ID:ENSMUSP00000029331
Original member Current member EBI ENSMUST00000193943.1 ENSMUSP00000141371.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000193943.1Link to Ensembl Protein Viewer:ENSMUSP00000141371.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000193943Re-query CCDS DB by Protein ID:ENSMUSP00000141371
Original member Current member EBI ENSMUST00000193201.1 ENSMUSP00000142006.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000193201.1Link to Ensembl Protein Viewer:ENSMUSP00000142006.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000193201Re-query CCDS DB by Protein ID:ENSMUSP00000142006
Original member Current member NCBI NM_001282016.1 NP_001268945.1 Accepted alive Link to Nucleotide Sequence:NM_001282016.1Link to Protein Sequence:NP_001268945.1Re-query CCDS DB by Nucleotide ID:NM_001282016Re-query CCDS DB by Protein ID:NP_001268945Link to BLAST:NP_001268945.1
Original member Current member NCBI NM_008772.5 NP_032798.1 Accepted alive Link to Nucleotide Sequence:NM_008772.5Link to Protein Sequence:NP_032798.1Re-query CCDS DB by Nucleotide ID:NM_008772Re-query CCDS DB by Protein ID:NP_032798Link to BLAST:NP_032798.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001268945.1 373 P49650 373 100% 0 0
NP_032798.1 373 P49650 373 100% 0 0

Chromosomal Locations for CCDS 17377.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 61003442 61004563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1122 nt):
ATGACCGAGGTGCCTTGGTCGGTTGTCCCCAACGGGACGGATGCTGCCTTTCTGGCGGGCCTGGGCTCGC
TTTGGGGAAACAGTACTGTCGCCTCAACTGCAGCAGTTTCCTCTTCATTCCAATGTGCCCTGACCAAGAC
CGGTTTCCAGTTCTACTACCTGCCGGCTGTCTACATTTTAGTGTTCATCATAGGCTTCCTAGGCAACAGC
GTGGCTATCTGGATGTTCGTTTTCCACATGAAGCCTTGGAGCGGCATCTCCGTGTACATGTTCAATTTGG
CTCTGGCTGACTTTTTATACGTGCTCACCCTACCAGCCCTCATCTTCTACTACTTCAACAAGACTGACTG
GATCTTCGGGGATGCTATGTGCAAGCTGCAGAGATTCATCTTCCACGTAAATCTCTACGGTAGCATCTTG
TTCCTCACCTGCATCAGCGCACACAGGTACAGTGGCGTGGTGTACCCTCTCAAGTCTCTGGGCAGGCTCA
AGAAGAAGAATGCCATTTATGTCAGCGTGCTGGTGTGGCTCATTGTGGTGGTGGCCATCTCCCCTATTCT
CTTCTACTCTGGCACTGGGACTCGGAAAAACAAAACTGTCACCTGCTATGACACCACGTCCAATGATTAC
CTGCGAAGTTATTTCATCTACAGTATGTGCACGACTGTGGCCATGTTCTGCATCCCTTTGGTGCTGATCT
TGGGCTGTTATGGATTAATTGTTAAAGCTTTGATTTACAATGACCTGGACAACTCTCCGCTCCGGAGGAA
ATCCATTTACCTGGTGATAATTGTCCTGACGGTGTTTGCTGTGTCTTATATCCCTTTCCATGTGATGAAA
ACGATGAATTTGCGAGCACGGTTGGATTTCCAGACCCCAGAAATGTGTGATTTCAACGACAGGGTTTATG
CCACTTATCAGGTAACAAGAGGTCTAGCAAGTCTCAACAGCTGTGTGGACCCCATTCTTTATTTCTTGGC
TGGAGATACATTCAGAAGGAGACTGTCCCGAGCCACCAGGAAAGCTTCCAGGAGGAGTGAGGCCAATTTA
CAATCCAAGAGTGAAGAAATGACTCTCAATATTTTATCTGAGTTCAAGCAGAATGGAGACACGAGTTTGT
GA

Translation (373 aa):
MTEVPWSVVPNGTDAAFLAGLGSLWGNSTVASTAAVSSSFQCALTKTGFQFYYLPAVYILVFIIGFLGNS
VAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSIL
FLTCISAHRYSGVVYPLKSLGRLKKKNAIYVSVLVWLIVVVAISPILFYSGTGTRKNKTVTCYDTTSNDY
LRSYFIYSMCTTVAMFCIPLVLILGCYGLIVKALIYNDLDNSPLRRKSIYLVIIVLTVFAVSYIPFHVMK
TMNLRARLDFQTPEMCDFNDRVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKASRRSEANL
QSKSEEMTLNILSEFKQNGDTSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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