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Report for CCDS17206.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17206.1 Public Mus musculus 2 Gmeb2 23 108 98 CCDS HistoryNCBI Gene:229004Re-query CCDS DB by CCDS ID:17206.1Re-query CCDS DB by GeneID:229004See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17206.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000049032.12 ENSMUSP00000037075.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000049032.12Link to Ensembl Protein Viewer:ENSMUSP00000037075.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000049032Re-query CCDS DB by Protein ID:ENSMUSP00000037075
Original member NCBI NM_198169.2 NP_937812.1 Updated not alive Link to Nucleotide Sequence:NM_198169.2Link to Protein Sequence:NP_937812.1Re-query CCDS DB by Nucleotide ID:NM_198169Re-query CCDS DB by Protein ID:NP_937812
Current member NCBI NM_198169.3 NP_937812.1 Accepted alive Link to Nucleotide Sequence:NM_198169.3Link to Protein Sequence:NP_937812.1Re-query CCDS DB by Nucleotide ID:NM_198169Re-query CCDS DB by Protein ID:NP_937812Link to BLAST:NP_937812.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_937812.1 530 P58929 530 100% 0 0

Chromosomal Locations for CCDS 17206.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 181253783 181254423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181255142 181255264 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181255495 181255632 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181255872 181255943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181258984 181259141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181260295 181260398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181264981 181265108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181265815 181265912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 181277949 181278079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGGCAACCCCAGATGTGAGCGTCCACATGGAGGAGGTGGTGGTTGTGACAACTCCAGACACTGCAGTTG
ATGGCAGTGGTGTAGAGGAAGTGAAGACAGTGCTTGTAACAACGAACCTAGCTCCTCATGGGGGTGATTT
GACAGAAGATAACATGGAAACAGAAAATGCAGCAGCTGCAGCTGCTGCTGCTTTTACAGCCTCCTCACAG
CTCAAGGAAGCCGTGTTAGTGAAGATGGCTGAAGAGGGGGAGAACTTAGAGGCTGAAATTGTGTACCCCA
TCACTTGCGGAGACAGCAGAGCTAACCTCATTTGGAGGAAGTTTGTGTGCCCTGGCATCAATGTGAAATG
TGTTCAGTATGATGAACATGTGATCAGCCCAAAGGAGTTTGTGCACCTGGCAGGGAAATCTACCTTGAAG
GATTGGAAGAGAGCCATCCGGATGAATGGCATCATGCTCAGGAAGATCATGGACTCTGGAGAGCTAGACT
TCTACCAGCATGACAAGGTCTGCTCTAATACTTGCCGCAGCACGAAGATTGACCTTTCAGGGGCACGTGT
ATCCCTGAGCAGTCCTACATCCACAGAATACATCCCACTCACACCAGCTGCAGCTGATGTGAATGGCTCA
CCTGCCACCATCACCATAGAGACCTGTGAGGACCCTGGTGACTGGACCACAACCATTGGAGATGACACAT
TTGCATTCTGGCGGGGATTAAAGGATGCGGGCTTACTGGATGAAGTCATACAGGAATTTCAACAGGAGCT
AGAGGAAACCATGAAAGGCCTGCAGCAGCGAGTGCAGGACCCACCCCTGCAGCTCCGAGATGCTGTCCTC
CTCAACAACATCGTGCAAAACTTTGGCATGCTGGATCTGGTGAAGAAGGTACTGGCCAGCCACAAGTGTC
AGATGGATCGTTCCCGGGAACAGTATGCACGGGACCTGGCAGCCCTGGAGCAGCAGTGTGATGAACATCG
CCGCCGTGCCAAGGAGCTGAAGCACAAGTCCCAGCACCTCAGCAATGTGCTCATGACGCTGACCCCGGTT
CCATTGCCATCCCCTATGAAGCGGCCCCGTCTCGCCCGGGCTACATCTGGACCAGCTGCTATGGCTTCCC
AGGTGCTCACACAGTCTGCACAGATTGCTTTGAGTCCAGGAATGCCTGTGTCCCAGTTGACCAGTGTGCC
ACTGGGCAAAGTAGTATCTACACTGCCCTCCACTGTCCTGGGCAAGGGCTCTCCTCAAGCTGCCCCAGCC
AGTTCACCGGCCTCCCCACTGCTCGGAGGCTACACAGTTCTGGCCTCCTCTGGCTCTACCTTCCCCAACG
CAGTCGAGATCCATCCGGACACTTCCAGCCTCACAGTTTTGAGCACAGCCGCCATGCAGGATGGCAGCAC
AGTACTGAAGGTAGTCAGCCCCTTGCAGCTGCTCACCCTGCCTGGCCTGGGACCCACCCTACAGAATGTG
GCTCAGGCATCACCTGCAGGCAGCACCATTGTGACAATGCCTACAGCAACTGCCACTGGACCTGAGGAGC
ACACGGCCACTATTGAGGTGGCTGCTGTAGCAGAGGACCATGAGCAGAAGTAG

Translation (530 aa):
MATPDVSVHMEEVVVVTTPDTAVDGSGVEEVKTVLVTTNLAPHGGDLTEDNMETENAAAAAAAAFTASSQ
LKEAVLVKMAEEGENLEAEIVYPITCGDSRANLIWRKFVCPGINVKCVQYDEHVISPKEFVHLAGKSTLK
DWKRAIRMNGIMLRKIMDSGELDFYQHDKVCSNTCRSTKIDLSGARVSLSSPTSTEYIPLTPAAADVNGS
PATITIETCEDPGDWTTTIGDDTFAFWRGLKDAGLLDEVIQEFQQELEETMKGLQQRVQDPPLQLRDAVL
LNNIVQNFGMLDLVKKVLASHKCQMDRSREQYARDLAALEQQCDEHRRRAKELKHKSQHLSNVLMTLTPV
PLPSPMKRPRLARATSGPAAMASQVLTQSAQIALSPGMPVSQLTSVPLGKVVSTLPSTVLGKGSPQAAPA
SSPASPLLGGYTVLASSGSTFPNAVEIHPDTSSLTVLSTAAMQDGSTVLKVVSPLQLLTLPGLGPTLQNV
AQASPAGSTIVTMPTATATGPEEHTATIEVAAVAEDHEQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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