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Report for CCDS17151.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17151.1 Public Mus musculus 2 Gnas 23 108 98 CCDS HistoryNCBI Gene:14683Re-query CCDS DB by CCDS ID:17151.1Re-query CCDS DB by GeneID:14683See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17151.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080493.11 ENSMUSP00000079341.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080493.11Link to Ensembl Protein Viewer:ENSMUSP00000079341.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000080493Re-query CCDS DB by Protein ID:ENSMUSP00000079341
Original member Current member EBI ENSMUST00000185956.6 ENSMUSP00000140174.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000185956.6Link to Ensembl Protein Viewer:ENSMUSP00000140174.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000185956Re-query CCDS DB by Protein ID:ENSMUSP00000140174
Original member Current member NCBI NM_010309.4 NP_034439.2 Accepted alive Link to Nucleotide Sequence:NM_010309.4Link to Protein Sequence:NP_034439.2Re-query CCDS DB by Nucleotide ID:NM_010309Re-query CCDS DB by Protein ID:NP_034439Link to BLAST:NP_034439.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034439.2 1133 Q6R0H7-1 1133 100% 0 0

Chromosomal Locations for CCDS 17151.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 174297862 174300217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174334212 174334284 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174336747 174336791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174341653 174341707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174341810 174341929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174343200 174343297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174345075 174345129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174345228 174345301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174345383 174345562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174345649 174345779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174345990 174346057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 174346242 174346388 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3402 nt):
ATGGGCATGTTCAACTGCCTCCACGGCAATAATATGTCAGGACAACACGATATCCCCCCTGAAGTCGGGG
AGCAGCCCGAGCAAGAACCTTTGGAAGCCCCAGGGGCAGCTGCCCCCGGTGCTGGGGCTGGCCCAGCCGA
AGAAATGGCGACCGAACCGGACTCCGAACCGTCTAACAATGAGCCCGTCCCCGACGAGACTGGCAGTGAG
ATCAGTGGACCCCCAGAAGACTCCAAATCTGACATCCAAAGCCCCTGCCAGGCCTTCGAGGAAGTCCGAG
TGGGTGGAGACTACAGCCCACCTCCGGAGGAAGCCATGCCATTCGAGACACAACAGCCCAGCCTGGGAGA
TTTCTGGCCCACCCTGGAGCAGCCAGGACCATCTGGGACCCCATCAGGCCTCCAAGCCTTCAACCCAGCG
ATTTTGGAGCCCGGGACCCCCACTGGCGCGAGCCCAGGCCTGGGAGCCTATACCCCCCCACCAGAAGAAG
CTATGCCATTTGAGTTCAACGAGCCTGCCCAGGGAGACCATAGCCAGCCTCCCTTGCAAGTCCCAGACCT
TGCGCCAGGAGGTCCGGAAGCATTGGTCCCCAGAGCTCTTCCCGCGGAGCCCGGGAACATCAGATTTGAA
AACGCTGGCTTCCGAGAAGACTACAGCCCTCCCCCTGAAGAATCTGTGCCATTTCAGGTCGGTGGAGAAG
AATTCGGGGGCGATAGCCCACCCCCAGGACTCCCGCGAGTCATCCCACAAATCGGCATTGGCGGCGAGTT
CCCGACAGTCGCGGTCCCGAGTGCGCTCTGCCTCGCTCCCGCCGAGAACGCGCCTCCCCTCTGGGTCCGA
GGCGCCATTGACAGACCATTCCGCGAGGCTGTCAGATCTCCTCCTAACTTCGCATGCGACAGCCCCCCGA
TGGAGATCACCAGACCCCTGCTTGAGATTGGCAGAGCCTCCATTGGGGTCGACGACGACACCGCTGTCAA
TATGGACAGCCCCCCAATCGCAAGTGATGGCCCGCCCATCGAAGTCTCGGGAGCCCCAGATAAGAGCGAG
TGCGCAGAGAGACCCCCAGTTGAGCGAGAAGCAGCCGAGATGGAAGGAAGCCCTACCACCGCCACTGCGG
TGGAAGGAAAAGTCCCCTCTCCGGAGAGAGGGGACGGATCTTCCACCCAGCCTGAAGCAATGGATGCCAA
GCCAGCCCCTGCTGCCCAAGCCGTCTCTACCGGATCTGATGCTGGAGCTCCTACGGATTCCGCGATGCTC
ACAGATAGCCAGAGCGATGCCGGAGAAGACGGGACAGCCCCAGGAACGCCTTCAGATCTCCAGTCGGATC
CTGAAGAACTCGAAGAAGCCCCAGCTGTCCGCGCCGATCCTGACGGAGGGGCAGCCCCAGTCGCCCCAGC
CACTCCTGCCGAGTCCGAGTCTGAAGGCAGCAGAGATCCAGCCGCCGAGCCAGCCTCCGAGGCAGTCCCT
GCCACCACGGCCGAGTCTGCCTCCGGGGCAGCCCCTGTCACCCAGGTGGAGCCCGCAGCCGCGGCAGTCT
CTGCCACCCTGGCGGAGCCTGCCGCCCGGGCAGCCCCTATCACCCCCAAGGAGCCCACTACCCGGGCAGT
CCCCTCTGCTAGAGCCCATCCGGCCGCTGGAGCAGTCCCTGGCGCCCCAGCAATGTCAGCCTCTGCTAGG
GCAGCTGCCGCTAGGGCAGCCTATGCAGGTCCACTGGTCTGGGGAGCCAGGTCACTCTCAGCTACTCCCG
CCGCTCGGGCATCCCTTCCTGCCCGCGCAGCAGCTGCCGCCCGGGCAGCCTCTGCTGCCCGCGCAGTCGC
TGCTGGCCGGTCAGCCTCTGCCGCCCCCAGCAGGGCCCATCTTAGACCCCCCAGCCCCGAGATCCAGGTT
GCTGACCCGCCTACTCCGCGGCCTCCTCCGCGGCCGACTGCCTGGCCTGACAAGTACGAGCGGGGCCGAA
GCTGCTGCAGGTACGAGGCATCGTCTGGCATCTGCGAGATCGAGTCCTCCAGTGATGAGTCGGAAGAAGG
GGCCACCGGCTGCTTCCAGTGGCTTCTGCGGCGAAACCGCCGCCCTGGCCTGCCCCGGAGCCACACGGTC
GGGAGCAACCCAGTCCGCAACTTCTTCACCCGAGCCTTCGGAAGCTGCTTCGGTCTATCCGAGTGTACCC
GATCACGATCCCTCAGCCCCGGGAAGGCCAAGGATCCTATGGAGGAGAGGCGCAAACAGATGCGCAAAGA
AGCCATTGAGATGCGAGAGCAGAAGCGCGCAGATAAGAAACGCAGCAAGCTCATCGACAAGCAACTGGAG
GAGGAGAAGATGGACTACATGTGTACACACCGCCTGCTGCTTCTAGGTGCTGGAGAGTCTGGCAAAAGCA
CCATTGTGAAGCAGATGAGGATCCTGCATGTTAATGGGTTTAACGGAGAGGGCGGCGAAGAGGACCCGCA
GGCTGCAAGGAGCAACAGCGATGGTGAGAAGGCCACTAAAGTGCAGGACATCAAAAACAACCTGAAGGAG
GCCATTGAAACCATTGTGGCCGCCATGAGCAACCTGGTGCCCCCTGTGGAGCTGGCCAACCCTGAGAACC
AGTTCAGAGTGGACTACATTCTGAGCGTGATGAACGTGCCGAACTTTGACTTCCCACCTGAATTCTATGA
GCATGCCAAGGCTCTGTGGGAGGATGAGGGAGTGCGTGCCTGCTACGAGCGCTCCAATGAGTACCAGCTG
ATTGACTGTGCCCAGTACTTCCTGGACAAGATTGATGTGATCAAGCAGGCCGACTACGTGCCAAGTGACC
AGGACCTGCTTCGCTGCCGTGTCCTGACCTCTGGAATCTTTGAGACCAAGTTCCAGGTGGACAAAGTCAA
CTTCCACATGTTCGATGTGGGCGGCCAGCGCGATGAGCGCCGCAAGTGGATCCAGTGCTTCAATGATGTG
ACTGCCATCATCTTCGTGGTGGCCAGCAGCAGCTACAACATGGTCATTCGGGAGGACAACCAGACTAACC
GCCTGCAGGAGGCTCTGAACCTCTTCAAGAGCATCTGGAACAACAGATGGCTGCGCACCATCTCTGTGAT
TCTCTTCCTCAACAAGCAAGACCTGCTTGCTGAGAAAGTCCTCGCTGGCAAATCGAAGATTGAGGACTAC
TTTCCAGAGTTCGCTCGCTACACCACTCCTGAGGATGCGACTCCCGAGCCGGGAGAGGACCCACGCGTGA
CCCGGGCCAAGTACTTCATTCGGGATGAGTTTCTGAGAATCAGCACTGCTAGTGGAGATGGGCGCCACTA
CTGCTACCCTCACTTTACCTGCGCCGTGGACACTGAGAACATCCGCCGTGTCTTCAACGACTGCCGTGAC
ATCATCCAGCGCATGCATCTCCGCCAATACGAGCTGCTCTAA

Translation (1133 aa):
MGMFNCLHGNNMSGQHDIPPEVGEQPEQEPLEAPGAAAPGAGAGPAEEMATEPDSEPSNNEPVPDETGSE
ISGPPEDSKSDIQSPCQAFEEVRVGGDYSPPPEEAMPFETQQPSLGDFWPTLEQPGPSGTPSGLQAFNPA
ILEPGTPTGASPGLGAYTPPPEEAMPFEFNEPAQGDHSQPPLQVPDLAPGGPEALVPRALPAEPGNIRFE
NAGFREDYSPPPEESVPFQVGGEEFGGDSPPPGLPRVIPQIGIGGEFPTVAVPSALCLAPAENAPPLWVR
GAIDRPFREAVRSPPNFACDSPPMEITRPLLEIGRASIGVDDDTAVNMDSPPIASDGPPIEVSGAPDKSE
CAERPPVEREAAEMEGSPTTATAVEGKVPSPERGDGSSTQPEAMDAKPAPAAQAVSTGSDAGAPTDSAML
TDSQSDAGEDGTAPGTPSDLQSDPEELEEAPAVRADPDGGAAPVAPATPAESESEGSRDPAAEPASEAVP
ATTAESASGAAPVTQVEPAAAAVSATLAEPAARAAPITPKEPTTRAVPSARAHPAAGAVPGAPAMSASAR
AAAARAAYAGPLVWGARSLSATPAARASLPARAAAAARAASAARAVAAGRSASAAPSRAHLRPPSPEIQV
ADPPTPRPPPRPTAWPDKYERGRSCCRYEASSGICEIESSSDESEEGATGCFQWLLRRNRRPGLPRSHTV
GSNPVRNFFTRAFGSCFGLSECTRSRSLSPGKAKDPMEERRKQMRKEAIEMREQKRADKKRSKLIDKQLE
EEKMDYMCTHRLLLLGAGESGKSTIVKQMRILHVNGFNGEGGEEDPQAARSNSDGEKATKVQDIKNNLKE
AIETIVAAMSNLVPPVELANPENQFRVDYILSVMNVPNFDFPPEFYEHAKALWEDEGVRACYERSNEYQL
IDCAQYFLDKIDVIKQADYVPSDQDLLRCRVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDV
TAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSKIEDY
FPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRHYCYPHFTCAVDTENIRRVFNDCRD
IIQRMHLRQYELL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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