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Report for CCDS17096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17096.1 Public Mus musculus 2 Kcnb1 23 108 98 CCDS HistoryNCBI Gene:16500Re-query CCDS DB by CCDS ID:17096.1Re-query CCDS DB by GeneID:16500See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17096.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059826.9 ENSMUSP00000057981.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059826.9Link to Ensembl Protein Viewer:ENSMUSP00000057981.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000059826Re-query CCDS DB by Protein ID:ENSMUSP00000057981
Original member Current member EBI ENSMUST00000207917.1 ENSMUSP00000147093.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207917.1Link to Ensembl Protein Viewer:ENSMUSP00000147093.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207917Re-query CCDS DB by Protein ID:ENSMUSP00000147093
Original member Current member NCBI NM_008420.4 NP_032446.2 Accepted alive Link to Nucleotide Sequence:NM_008420.4Link to Protein Sequence:NP_032446.2Re-query CCDS DB by Nucleotide ID:NM_008420Re-query CCDS DB by Protein ID:NP_032446Link to BLAST:NP_032446.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032446.2 857 Q03717 857 100% 0 0

Chromosomal Locations for CCDS 17096.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 167104353 167106359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 167188057 167188623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2574 nt):
ATGCCGGCGGGCATGACGAAGCATGGCTCGCGCTCCACCAGCTCGCTGCCGCCCGAGCCCATGGAGATCG
TGCGCAGCAAGGCGTGCTCGCGCCGGGTGCGCCTCAACGTCGGGGGCCTGGCGCACGAGGTGCTGTGGCG
CACTCTGGACCGCCTGCCTCGCACGCGGCTGGGCAAGCTCCGGGACTGCAACACGCACGACTCTCTGCTC
CAGGTGTGCGACGACTACAGCCTCGAGGACAACGAGTACTTCTTCGACCGCCACCCTGGCGCCTTCACCT
CTATTCTCAATTTCTACCGCACCGGCCGGCTGCACATGATGGAGGAGATGTGCGCGCTGAGCTTCAGCCA
GGAGCTGGACTACTGGGGCATCGATGAGATCTACCTGGAGTCCTGCTGCCAGGCCCGCTACCACCAAAAG
AAGGAGCAGATGAACGAGGAGCTGAAGCGGGAGGCTGAGACGCTGCGGGAGCGGGAGGGCGAGGAGTTCG
ACAACACGTGCTGTGCTGAGAAGAGGAAGAAACTTTGGGACCTGCTGGAGAAGCCCAACTCATCGGTGGC
CGCCAAGATCCTGGCCATCATCTCCATCATGTTCATTGTCCTCTCCACCATTGCCCTGTCACTCAACACA
CTGCCTGAGCTACAGAGCCTGGACGAATTCGGCCAGAGCACGGACAACCCGCAGCTGGCACACGTGGAGG
CTGTGTGCATCGCGTGGTTCACCATGGAGTACTTGCTGAGGTTCCTGTCCTCGCCCAAGAAATGGAAGTT
CTTTAAGGGCCCCCTCAACGCCATTGACTTACTGGCCATCCTGCCCTACTACGTCACCATCTTCCTCACA
GAATCCAACAAGAGCGTGCTGCAGTTCCAGAATGTGCGCCGTGTGGTCCAGATCTTCCGCATCATGCGCA
TCCTGCGCATCCTGAAGTTGGCCCGCCACTCCACCGGTCTGCAGTCCTTGGGCTTCACGCTGCGCAGGAG
CTACAACGAGCTGGGCTTGCTCATCCTCTTCCTCGCCATGGGCATCATGATCTTCTCCAGCCTGGTCTTC
TTTGCCGAGAAGGATGAGGATGACACCAAGTTCAAAAGCATCCCCGCCTCTTTCTGGTGGGCTACCATCA
CCATGACGACCGTTGGTTACGGAGACATCTACCCTAAGACTCTCCTGGGGAAAATCGTGGGGGGCCTCTG
TTGCATTGCCGGTGTCCTGGTGATTGCCCTCCCCATTCCAATTATCGTCAATAACTTCTCCGAGTTCTAC
AAGGAGCAGAAGCGCCAGGAGAAAGCCATCAAGCGGAGAGAGGCTCTGGAGAGAGCCAAGAGGAACGGCA
GCATCGTGTCCATGAACATGAAGGATGCCTTCGCCCGGAGCATCGAGATGATGGACATCGTGGTGGAGAA
AAATGGAGAGGGCGTGGCTAAGAAGGACAAGGTGCAGGATAACCACCTGTCTCCCAACAAGTGGAAATGG
ACCAAGAGGGCGCTCTCCGAGACCAGCTCGAGCAAGTCCTTTGAAACCAAGGAGCAGGGATCTCCTGAGA
AGGCCAGGTCCTCGTCTAGTCCGCAGCACTTGAACGTCCAGCAGCTGCAAGACATGTACAGCAAGATGGC
CAAGACCCAGTCTCAACCCATCCTCAACACCAAGGAGATGGCGCCGCAGAGCCAGCCGCAGGAAGAACTG
GAGATGGGCAGCATGCCCAGCCCCGTGGCCCCTCTGCCCACGCGCACAGAGGGCGTCATCGACATGCGCA
GCATGTCTAGCATCGACAGCTTCATCAGCTGCGCCACGGACTTCCCTGAAGCCACCAGATTCTCCCACAG
TCCTCTGGCATCCCTCTCCGGCAAGTCTGGGGGCAGCACAGCCCCGGAGGTGGGCTGGCGGGGGGCTCTG
GGTGCCAGCGGCGGGAGACTCATGGAGACCAACCCCATCCCCGAGGCCAGCCGCTCTGGTTTCTTCGTGG
AGAGCCCCCGGAGTTCCATGAAGACCCACAACCCCATGAAGCTGCGAGCGCTCAAGGTTAACTTCCTGGA
GGGCGATCCCACCCCGCTGCTACCGGCTCTGGGCTTGTATCACGATCCTCTTAGGAACAGAGGAGGCGCA
GCGGCTGCAGTCGCCGGACTGGAGTGTGCCTCCCTCTTAGACAAGCCCGTGCTGAGCCCGGAGTCCTCCA
TCTACACCACAGCAAGTGCCAGGACGCCCCCTCGCTCCCCAGAGAAACACACAGCAATAGCGTTCAACTT
CGAGGCGGGGGTCCACCAGTACATAGACACCGACACTGATGACGAGGGTCAGCTGCTCTACAGCGTGGAC
TCCAGTCCTCCCAAGAGTCTCCACGGGAGTACCAGCCCCAAGTTCAGCCTTGGAGCTAGAACAGAAAAGA
ACCACTTCGAGAGCTCCCCGTTGCCCACCTCCCCTAAGTTCTTAAGGCCGAACTGTGTCTACGCCTCAGA
AGGGTTACCTGGGAAAGGTCCCGGGGCCCAAGAGAAATGCAAGCTGGAGAACCACACCTCCCCCGATGTG
CACATGCTGCCTGGGGGAGGAGCACACGGGAGCACTCGGGATCAGAGTATCTGA

Translation (857 aa):
MPAGMTKHGSRSTSSLPPEPMEIVRSKACSRRVRLNVGGLAHEVLWRTLDRLPRTRLGKLRDCNTHDSLL
QVCDDYSLEDNEYFFDRHPGAFTSILNFYRTGRLHMMEEMCALSFSQELDYWGIDEIYLESCCQARYHQK
KEQMNEELKREAETLREREGEEFDNTCCAEKRKKLWDLLEKPNSSVAAKILAIISIMFIVLSTIALSLNT
LPELQSLDEFGQSTDNPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVTIFLT
ESNKSVLQFQNVRRVVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVF
FAEKDEDDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFY
KEQKRQEKAIKRREALERAKRNGSIVSMNMKDAFARSIEMMDIVVEKNGEGVAKKDKVQDNHLSPNKWKW
TKRALSETSSSKSFETKEQGSPEKARSSSSPQHLNVQQLQDMYSKMAKTQSQPILNTKEMAPQSQPQEEL
EMGSMPSPVAPLPTRTEGVIDMRSMSSIDSFISCATDFPEATRFSHSPLASLSGKSGGSTAPEVGWRGAL
GASGGRLMETNPIPEASRSGFFVESPRSSMKTHNPMKLRALKVNFLEGDPTPLLPALGLYHDPLRNRGGA
AAAVAGLECASLLDKPVLSPESSIYTTASARTPPRSPEKHTAIAFNFEAGVHQYIDTDTDDEGQLLYSVD
SSPPKSLHGSTSPKFSLGARTEKNHFESSPLPTSPKFLRPNCVYASEGLPGKGPGAQEKCKLENHTSPDV
HMLPGGGAHGSTRDQSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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