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Report for CCDS16830.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
16830.1 Public Mus musculus 2 Insm1 23 108 98 CCDS HistoryNCBI Gene:53626Re-query CCDS DB by CCDS ID:16830.1Re-query CCDS DB by GeneID:53626See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 16830.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089257.5 ENSMUSP00000092048.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089257.5Link to Ensembl Protein Viewer:ENSMUSP00000092048.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000089257Re-query CCDS DB by Protein ID:ENSMUSP00000092048
Original member NCBI NM_016889.3 NP_058585.2 Updated not alive Link to Nucleotide Sequence:NM_016889.3Link to Protein Sequence:NP_058585.2Re-query CCDS DB by Nucleotide ID:NM_016889Re-query CCDS DB by Protein ID:NP_058585
Current member NCBI NM_016889.4 NP_058585.2 Accepted alive Link to Nucleotide Sequence:NM_016889.4Link to Protein Sequence:NP_058585.2Re-query CCDS DB by Nucleotide ID:NM_016889Re-query CCDS DB by Protein ID:NP_058585Link to BLAST:NP_058585.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058585.2 521 Q63ZV0 521 100% 0 0

Chromosomal Locations for CCDS 16830.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 146222266 146223831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1566 nt):
ATGCCCCGCGGGTTTCTGGTGAAGCGCAGCAAGAAGTCCACGCCCGTGTCCTACCGGGTCCGCGGCGGCG
AGGACAGTGACCGGGCGCTGCTGCTGTCACCCGGCTGCGGGGGCGCCCGCGCCGAGCCCCCGGTGCCCAG
CCCCGGGCCGCTGCCGCCACCTCCGCCGCCGGCGCTCGCGGAGCGCGCCCATGCTGCGCTCGCCGCCGCG
CTCGCCTGCGCGCCAGGCCCGCCGCCGCCACCCCCGCCAGGCCCGCGGGCCGCGCACTTCGGCAACCCCG
AGGCTGCGCACCCGGCGCCTCTCTACAGTCCCACGCGGCCGGTGAGCCGCGAGCACGAGAAGCACAAGTA
CTTCGAGCGCAGCTTCAACCTGGGCTCGCCGGTGTCCGCTGAGTCCTTCCCCACGCCCGCCGCGCTGCTC
GCAGGGGGAGGCAGCGGCGCCAACGGCGCTGGCGGCGGCGGCGGCGGCACCTGCGGCGGAGACGCGCTGC
TCTTCGCTCCCGCCGAGCTCAAGATGGGCACTGCGTTCTCCGCCGGCGCCGAGGCGGCCCGGGGTCCTGG
GACCGGTCCTCCACTGTCCCCCGCCGCGGCCCTGCGGCCCCCGGGCAAGCGACCGGCGCCCCCCGCCGCT
GTCGCTACAGAGCCGCCCGCCAAGGCAGCCAAGGCCCCGAGCGCCAAAAAGCCGAAGGCCATCCGCAAGC
TGCACTTCGAGGACGAGGTGACCACGTCGCCGGTTCTGGGGCTCAAGATCAAGGAGGGCCCGGTGGAGGC
GCCGCGGGGTCGCGCGGGGGGCGCGACCCGACCCCTGGGCGAGTTCATCTGCCAGCTGTGCAAGGAGGAG
TACGCTGACCCGTTCGCGCTGGCGCAGCACAAGTGCTCGCGCATCGTGCGCGTGGAGTACCGCTGCCCAG
AGTGCGCCAAGGTCTTCAGCTGCCCGGCCAACCTGGCCTCGCACCGCCGCTGGCACAAACCACGGCCGGT
GCCCGCGGCGGCCCGCGCGCCAGAGCCAGAAGCCGCCACCAGGGCGGAGGCGCGCGAGGCTGCGGGCGGC
GGCAGCAGCGATCGGGACACGCCGAGCCCTGGCGGCGTATCCGAGTCAGGCTCCGAGGACGGGCTCTACG
AGTGCCACCACTGCGCCAAGAAGTTCCGTCGCCAGGCCTATCTGCGCAAGCACCTGCTGGCACATCACCA
GGCGCTGCAGGCCAAAGGCGCGCCCCCGCCCCCGCCGCCGCCGCCACCCCCCGCCGAGGACATCCTGGCT
TTCTACGCGGGGCCCGACGAAAAGGCGCCCCAGGAGGCCTCGGGCGACGGCGAGGCGGCCGGCGTGCTGG
GCCTGAGTGCGACCGCCCAGTGCCACCTGTGCCCAGTGTGCGGGGAGACCTTCCCCAGCAAGGGCGCCCA
GGAGCGCCACCTGCGCCTGCTGCACGCTGCCCAGGTGTTCCCCTGCAAGTACTGCCCGGCCACCTTCTAC
AGCTCCCCGGGCCTGACCCGGCACATCAACAAGTGCCACCCGTCTGAGAATAGACAGGTGATCCTCCTTC
AGGTGCCTGTGCGTCCGGCCTGCTAG

Translation (521 aa):
MPRGFLVKRSKKSTPVSYRVRGGEDSDRALLLSPGCGGARAEPPVPSPGPLPPPPPPALAERAHAALAAA
LACAPGPPPPPPPGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFNLGSPVSAESFPTPAALL
AGGGSGANGAGGGGGGTCGGDALLFAPAELKMGTAFSAGAEAARGPGTGPPLSPAAALRPPGKRPAPPAA
VATEPPAKAAKAPSAKKPKAIRKLHFEDEVTTSPVLGLKIKEGPVEAPRGRAGGATRPLGEFICQLCKEE
YADPFALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRWHKPRPVPAAARAPEPEAATRAEAREAAGG
GSSDRDTPSPGGVSESGSEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPPPPPPPPPPAEDILA
FYAGPDEKAPQEASGDGEAAGVLGLSATAQCHLCPVCGETFPSKGAQERHLRLLHAAQVFPCKYCPATFY
SSPGLTRHINKCHPSENRQVILLQVPVRPAC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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