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Report for CCDS15765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15765.1 Public Mus musculus 2 Man1b1 23 108 98 CCDS HistoryNCBI Gene:227619Re-query CCDS DB by CCDS ID:15765.1Re-query CCDS DB by GeneID:227619See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15765.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042390.4 ENSMUSP00000036996.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042390.4Link to Ensembl Protein Viewer:ENSMUSP00000036996.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000042390Re-query CCDS DB by Protein ID:ENSMUSP00000036996
Original member Current member NCBI NM_001029983.2 NP_001025154.1 Accepted alive Link to Nucleotide Sequence:NM_001029983.2Link to Protein Sequence:NP_001025154.1Re-query CCDS DB by Nucleotide ID:NM_001029983Re-query CCDS DB by Protein ID:NP_001025154Link to BLAST:NP_001025154.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025154.1 658 A2AJ15 658 100% 0 0

Chromosomal Locations for CCDS 15765.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 25332860 25332976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25333435 25333543 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25334377 25334492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25338113 25338267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25341607 25341716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25343224 25343409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25344968 25345116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25345406 25345594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25348036 25348226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25348571 25348691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25349170 25349367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25349451 25349582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 25350362 25350565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1977 nt):
ATGTACCCACCGCCGGCGCCGCCGCCGGCGCCTCACCGGGACTTCATCTCGGTGACGCTGAGCCTGGGCG
AGAGCTACGACAACAGCAAGAGCCGGCGGCGGCGCTCATGCTGGAGGAAATGGAAGCAGCTTTCGAGGCT
ACAGCGGAATGTGATTCTCTTCGTCTTGGGCTTTCTGATTCTCTGTGGATTCCTGTACTCTCTTCATACG
GCTGACCAGTGGAAAGCTCTGAGTGGCAGACCTGCAGAAGTAGAGAAGATGAAGCAAGAAGTCCTGCCTG
TCTTACCAGCGCCTCAGAAGGAAAGTGCTGAACAAGAAGGGTTTGCAGACATACTCTCTCAGAAGCGGCA
AAGGCATTTTCGGCGGGGCCCTCCCCATCTGCAGATTAGACCCCCCAACACAGTCTCCAAGGATGGGATG
CAGGATGATGCTAAGGAGAGAGAAGCAGCCCTGGGGAAGGCTCAGCAGGAAGAAAACACACAGAGAACCG
TCATCAGCTGGCGGGGAGCCGTGATTGAGCCTGAACAGGCCACTGAACTTCCTTACAAAAGAGCTGAAGC
CTCCATCAAACCTCTGGTTTTGGCATCCAAGATATGGAAAGAGCCAGCCCCCCCGAATGAGCGCCAGAAG
GGAGTGATTGAGGCCTTTCTCCATGCTTGGAAGGGTTACCAAAAGTTTGCTTGGGGCCATGATGAACTAA
AACCTGTGTCCAAAACCTTCAGTGAGTGGTTTGGCCTGGGCCTCACCCTGATCGATGCCTTGGATACCAT
GTGGATTTTGGGTCTGAAGCAAGAATTTAAGCAAGCCAGGAAATGGGTATCAGAGAACTTAGACTTTCAG
AAGAATGTTGATGTCAACCTGTTTGAGAGCACCATTCGCATCTTAGGGGGCCTGCTGAGTACCTACCACC
TGTCGGGGGACAGCCTCTTCCTGACCAAAGCTGAAGATTTTGGAAAACGGCTGATGCCTGCCTTCACTAC
GCCCTCCAAGATCCCATACTCTGATGTGAACATTGGCACTGGATTTGCCCACTCACCCCAGTGGACTTCA
GACAGCACGGTGGCAGAAGTGACGAGCATTCAGTTGGAGTTCCGGGAGCTCTCTCGTCTTACTGGAATAA
AGAAATTCCAGGAGGCCGTGGAGGAAGTGACAAAGCACATCCACTCCCTGTCTGGGAAGAAAGACGGGCT
GGTGCCTATGTTCATCAACACGAACAGCGGCCTCTTCACCCACCCAGGAGTGTTCACCTTGGGGGCCAGG
GCTGACAGCTACTACGAATACCTGCTGAAACAGTGGATCCAGGGTGGCAAGAAGGAGACACAGTTGCTGG
AAGACTATGTTAAAGCCATTGAGGGGATAAAAGCCCATCTGCTCCGGCAGTCTCAGCCCAGAAAGCTCAC
CTTCGTGGGAGAACTTGCCCACGGCCGCTTCAGTGCCAAGATGGACCACTTAGTGTGCTTCCTGCCGGGG
ACGCTGGCTTTGGGTGTCCACCATGGCCTGCCAGCTGACCACATGGATCTAGCTCGGGCCCTCATGGAGA
CCTGCTACCAGATGAACCAACAGATGGAGACAGGTCTGAGCCCTGAGATTGCACATTTCAACATGTACCC
TCGGGCAGATCATAAAGATGTGGAGGTCAAGCCAGCTGACAGGCACAACCTGCTGCGGCCAGAGACGGTG
GAAAGCCTATTCTATCTGTACCGTGTCACAAGGGACCGCAAGTACCAGGACTGGGGCTGGGAAATCCTGC
AGAGCTTCAATAAGTACACACGGGTCCCCTCAGGTGGCTATTCTTCTATCAACAACGTCCAGAATTCCCA
CAAGCCTGAGCCCAGGGACAAGATGGAGAGCTTCTTTGTGGGGGAAACCCTGAAGTACTTGTACCTGCTC
TTTTCTGATGACCTGGAGCTGCTCAGTCTGGACAGCTGTGTGTTCAACACAGAAGCCCATCCCCTCCCCA
TCTGGGCTCCTGCGTAG

Translation (658 aa):
MYPPPAPPPAPHRDFISVTLSLGESYDNSKSRRRRSCWRKWKQLSRLQRNVILFVLGFLILCGFLYSLHT
ADQWKALSGRPAEVEKMKQEVLPVLPAPQKESAEQEGFADILSQKRQRHFRRGPPHLQIRPPNTVSKDGM
QDDAKEREAALGKAQQEENTQRTVISWRGAVIEPEQATELPYKRAEASIKPLVLASKIWKEPAPPNERQK
GVIEAFLHAWKGYQKFAWGHDELKPVSKTFSEWFGLGLTLIDALDTMWILGLKQEFKQARKWVSENLDFQ
KNVDVNLFESTIRILGGLLSTYHLSGDSLFLTKAEDFGKRLMPAFTTPSKIPYSDVNIGTGFAHSPQWTS
DSTVAEVTSIQLEFRELSRLTGIKKFQEAVEEVTKHIHSLSGKKDGLVPMFINTNSGLFTHPGVFTLGAR
ADSYYEYLLKQWIQGGKKETQLLEDYVKAIEGIKAHLLRQSQPRKLTFVGELAHGRFSAKMDHLVCFLPG
TLALGVHHGLPADHMDLARALMETCYQMNQQMETGLSPEIAHFNMYPRADHKDVEVKPADRHNLLRPETV
ESLFYLYRVTRDRKYQDWGWEILQSFNKYTRVPSGGYSSINNVQNSHKPEPRDKMESFFVGETLKYLYLL
FSDDLELLSLDSCVFNTEAHPLPIWAPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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