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Report for CCDS15644.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15644.1 Public Mus musculus 2 Nmt2 23 108 98 CCDS HistoryNCBI Gene:18108Re-query CCDS DB by CCDS ID:15644.1Re-query CCDS DB by GeneID:18108See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15644.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000081932.12 ENSMUSP00000080600.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000081932.12Link to Ensembl Protein Viewer:ENSMUSP00000080600.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000081932Re-query CCDS DB by Protein ID:ENSMUSP00000080600
Original member Current member NCBI NM_008708.2 NP_032734.1 Accepted alive Link to Nucleotide Sequence:NM_008708.2Link to Protein Sequence:NP_032734.1Re-query CCDS DB by Nucleotide ID:NM_008708Re-query CCDS DB by Protein ID:NP_032734Link to BLAST:NP_032734.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032734.1 529 O70311 529 100% 0 0

Chromosomal Locations for CCDS 15644.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 3284297 3284406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3304812 3304947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3305397 3305439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3306983 3307032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3309467 3309611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3312456 3312574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3312662 3312753 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3312861 3312977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3314694 3314864 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3316140 3316248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3322571 3322741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3324831 3324998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3325264 3325401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 3326071 3326091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGGCGGAGGACAGCGAGTCTGCGGCCAGCCAGCAGAGCCTAGAGCTGGACGACCAGGACACGTGCGGAA
TAGACGGAGACAATGAGGAGGAGACCGAACACGCCAAAGGAAGCCCTGGAGGGGATTTGGGAGCAAAAAA
GAAAAAGAAGAAACAAAAGAGAAAAAAGGAGAAGCCAAATTCTGGGGGTACCAAGTCCGACTCTGCATCT
GACTCCCAGGAGATTAAGATTCAGCAGTCTTCTAAACACAACGCCATCTGGCAGCAGATTTCAGCAGGAG
CAGCCATGGGTGGTGATACTATGGAAGGTGAATGGATAGATTTAAGAATGTATCATAAGAATCCCACCAT
CCCTATTCAGAAGCTACAAGACATCCAGAGAGCAATGGAGCTGCTGTCTGCATGCCAAGGCCCAGCCAGG
AACATTGATGAGGCCACAAAACGCAGATACCAGTTTTGGGACACACAGCCAGTGCCCAAATTGAATGAAG
TCATAACATCTCATGGTGCAATTGAACCAGACAAAGACAATATCCGCCAGGAACCATATTCTTTGCCGCA
AGGTTTTATGTGGGACACTTTAGACTTGAGTAATGCCGAAGTGCTGAAGGAGCTGTATACGTTGCTGAAT
GAGAATTATGTGGAAGACGATGACAATATGTTCCGCTTTGACTATTCACCTGAGTTTCTGCTGTGGGCTC
TGCGCCCCCCAGGATGGCTTCTGCAGTGGCACTGTGGAGTCCGAGTGTCTTCAAATAAAAAGTTAGTAGG
TTTCATAAGTGCCATTCCAGCAAACATCCGAATTTATGATAGTGTGAAGAGGATGGTAGAAATCAACTTT
CTTTGTGTCCATAAGAAACTGAGATCAAAACGGGTAGCCCCAGTGTTGATTCGAGAAATAACCAGAAGAG
TGAACCTGGAAGGCATCTTTCAGGCTGTGTATACTGCGGGAGTAGTTCTTCCTAAGCCTGTGGCCACTTG
CAGGTATTGGCACCGATCCCTAAACCCCAGGAAACTGGTGGAAGTGAAATTTTCTCACCTGAGTAGAAAC
ATGACCTTACAGAGAACGATGAAGCTTTACAGACTTCCAGATGTTACAAAGACTTCAGGTTTGAGACCAA
TGGAACCAAAAGACATCAAAGCAGTCCGAGAGCTAATCAACATCTACTTGAAGCAGTTTCATCTAGCTCC
AGTGATGGATGACGCAGAAGTGGCCCACTGGTTCCTGCCCAGGGAGCACATCATTGACACGTTTGTAGTG
GAGAACCCCAGTGGGAAGCTGACTGACTTCCTGAGCTTCTACACTCTCCCCTCCACGGTTATGCACCACC
CAGCTCACAAAAGCCTCAAGGCTGCCTATTCCTTCTACAACATTCACACAGAGACACCCCTGCTGGACCT
CATGAATGATGCGCTCATTATAGCCAAATTGAAAGGATTTGATGTGTTCAATGCACTAGATTTGATGGAA
AATAAGACCTTCTTGGAAAAACTAAAGTTTGGTATAGGAGATGGCAACTTACAGTATTATTTGTACAACT
GGAGGTGTCCAGGGACAGACTCTGAAAAGGTTGGACTTGTTCTACAGTAG

Translation (529 aa):
MAEDSESAASQQSLELDDQDTCGIDGDNEEETEHAKGSPGGDLGAKKKKKKQKRKKEKPNSGGTKSDSAS
DSQEIKIQQSSKHNAIWQQISAGAAMGGDTMEGEWIDLRMYHKNPTIPIQKLQDIQRAMELLSACQGPAR
NIDEATKRRYQFWDTQPVPKLNEVITSHGAIEPDKDNIRQEPYSLPQGFMWDTLDLSNAEVLKELYTLLN
ENYVEDDDNMFRFDYSPEFLLWALRPPGWLLQWHCGVRVSSNKKLVGFISAIPANIRIYDSVKRMVEINF
LCVHKKLRSKRVAPVLIREITRRVNLEGIFQAVYTAGVVLPKPVATCRYWHRSLNPRKLVEVKFSHLSRN
MTLQRTMKLYRLPDVTKTSGLRPMEPKDIKAVRELINIYLKQFHLAPVMDDAEVAHWFLPREHIIDTFVV
ENPSGKLTDFLSFYTLPSTVMHHPAHKSLKAAYSFYNIHTETPLLDLMNDALIIAKLKGFDVFNALDLME
NKTFLEKLKFGIGDGNLQYYLYNWRCPGTDSEKVGLVLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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