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Report for CCDS15484.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15484.1 Public Mus musculus 1 Ndufs2 23 108 98 CCDS HistoryNCBI Gene:226646Re-query CCDS DB by CCDS ID:15484.1Re-query CCDS DB by GeneID:226646See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15484.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000013737.12 ENSMUSP00000013737.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000013737.12Link to Ensembl Protein Viewer:ENSMUSP00000013737.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000013737Re-query CCDS DB by Protein ID:ENSMUSP00000013737
Original member NCBI NM_153064.5 NP_694704.1 Updated not alive Link to Nucleotide Sequence:NM_153064.5Link to Protein Sequence:NP_694704.1Re-query CCDS DB by Nucleotide ID:NM_153064Re-query CCDS DB by Protein ID:NP_694704
Current member NCBI NM_153064.6 NP_694704.1 Accepted alive Link to Nucleotide Sequence:NM_153064.6Link to Protein Sequence:NP_694704.1Re-query CCDS DB by Nucleotide ID:NM_153064Re-query CCDS DB by Protein ID:NP_694704Link to BLAST:NP_694704.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694704.1 463 Q91WD5 463 100% 0 0

Chromosomal Locations for CCDS 15484.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 171235050 171235087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171235273 171235330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171236357 171236440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171236606 171236701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171237140 171237269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171237945 171238064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171238287 171238372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171238515 171238592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171238710 171238897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171239274 171239394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171240947 171241137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171246091 171246197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 171246994 171247088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1392 nt):
ATGGCGGCCCTGAGGGCGCTGCGCTGCCTCCGTGGGGTCGGAGCCCCGGTGCTGCGGCCCGGGTCTGGGA
TCCGCTTGCCAAGTCAGCCCAGCAGAGGTGCTCGGCAGTGGCAGCCAGATATTGAATGGGCAGAGCAGTT
TTCGGGAGCTGTCATGTACCCCTCCAAGGAAACAGCCCACTGGAAACCTCCTCCTTGGAATGATGTGGAC
ATTTTGAAGGAAAAAGCGGTGACCAACATGACCCTGAACTTTGGGCCCCAGCACCCAGCAGCCCACGGAG
TCCTGAGACTCGTGCTGGAACTGAGTGGAGAGATGGTGCGGAAATGTGACCCTCACATCGGGCTCCTGCA
CCGAGGCACGGAGAAGCTCATTGAGTACAAGACCTATCTGCAGGCCCTTCCATACTTTGACCGGTTGGAC
TATGTGTCCATGATGTGTAATGAACAGGCCTATTCGATAGCTGTGGAGAAGTTGCTAAACATCCAACCTC
CTCCTCGGGCACAGTGGATCCGAGTGCTCTTTGGAGAGATCACACGGATTTTAAACCATATCATGGCTGT
CACCACACATGCCCTGGACATCGGTGCCATGACTCCTTTCTTCTGGATGTTTGAAGAAAGAGAGAAGATG
TTCGAGTTCTATGAGCGGGTGTCTGGGGCCCGGATGCACGCGGCGTATATCCGACCTGGAGGAGTGCACC
AGGACCTACCTCTTGGGCTTCTGGATGACATTTATGAGTTTTCCAAGAACTTCTCTCTTCGGATTGATGA
GGTGGAGGAGATGCTGACCAACAATAGAATCTGGCGAAATAGGACAGTCGACATTGGGGTTGTAACAGCG
GAAGACGCACTTAACTATGGATTCAGTGGGGTGATGCTCCGAGGCTCAGGCATCCAGTGGGACTTGCGGA
AGACCCAGCCCTATGACGTTTACGACCAGGTGGAGTTTGATGTTCCTATCGGTTCTCGAGGGGACTGCTA
CGATAGGTACCTGTGTCGTGTGGAGGAGATGCGCCAGTCCCTGCGAATCATTGAGCAGTGTCTGAACAAG
ATGCCTCCCGGGGAGATCAAGGTTGATGACGCCAAAGTGTCCCCACCGAAGCGAGCAGAGATGAAGACGT
CCATGGAGTCACTAATTCATCACTTTAAGCTGTATACAGAGGGCTACCAAGTTCCTCCAGGAGCCACATA
TACTGCCATTGAAGCTCCTAAGGGAGAGTTTGGGGTATACTTGGTATCCGATGGCAGCAGCCGCCCTTAT
CGGTGTAAGATCAAGGCTCCCGGTTTTGCCCACCTGGCTGGTTTGGACAAGATGTCTAAGGGACACATGT
TGGCAGATGTCGTGGCCATCATAGGTACCCAGGATATTGTGTTCGGAGAAATAGACCGATGA

Translation (463 aa):
MAALRALRCLRGVGAPVLRPGSGIRLPSQPSRGARQWQPDIEWAEQFSGAVMYPSKETAHWKPPPWNDVD
ILKEKAVTNMTLNFGPQHPAAHGVLRLVLELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLD
YVSMMCNEQAYSIAVEKLLNIQPPPRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKM
FEFYERVSGARMHAAYIRPGGVHQDLPLGLLDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIGVVTA
EDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEEMRQSLRIIEQCLNK
MPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPY
RCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEIDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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