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Report for CCDS15301.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15301.1 Public Mus musculus 1 Fmod 23 108 98 CCDS HistoryNCBI Gene:14264Re-query CCDS DB by CCDS ID:15301.1Re-query CCDS DB by GeneID:14264See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15301.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048183.7 ENSMUSP00000035489.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048183.7Link to Ensembl Protein Viewer:ENSMUSP00000035489.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000048183Re-query CCDS DB by Protein ID:ENSMUSP00000035489
Original member Current member NCBI NM_021355.4 NP_067330.1 Accepted alive Link to Nucleotide Sequence:NM_021355.4Link to Protein Sequence:NP_067330.1Re-query CCDS DB by Nucleotide ID:NM_021355Re-query CCDS DB by Protein ID:NP_067330Link to BLAST:NP_067330.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067330.1 376 P50608 376 100% 0 0

Chromosomal Locations for CCDS 15301.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 134040224 134041202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 134046474 134046625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGCAGTGGGCCTCCGTCCTGCTGCTGGCTGGGCTCTGCTCACTTTCCCAGGGCCAGTATGATGAAGACT
CTCACTGGTGGATCCAATACCTCCGAAACCAGCAGTCCACCTACTACGACCCCTATGACCCTTACCCCTA
TGAGCCCTCTGAGCCTTACCCCTATGGAGTGGAAGAAGGCCCAGCCTATGCCTATGGTGCACCACCTCCA
CCAGAGCCCCGTGATTGTCCCCAAGAATGCGACTGTCCCCCCAACTTCCCCACAGCCATGTACTGTGACA
ACCGCAACCTCAAGTACCTGCCTTTTGTGCCCTCCCGCATGAAGTACGTCTACTTCCAGAACAACCAGAT
CTCTGCCATCCAGGAAGGTGTCTTTGACAATGCCACTGGGCTCCTCTGGGTCGCTCTACATGGCAACCAG
ATTACCAGTGACAAGGTAGGCAGGAAAGTCTTCTCCAAGCTGAGGCACTTGGAGAGGCTGTACTTGGACC
ACAACAACCTGACCCGGATGCCCGGCCCGCTGCCCCGATCCCTGAGAGAGCTCCACCTGGACCACAACCA
GATCTCACGGGTCCCCAACAATGCTTTGGAGGGCCTGGAGAACCTCACGGCCTTATATCTCCACCACAAT
GAGATCCAGGAAGTGGGGAGTTCCATGAGAGGCCTCCGGTCCCTGATCCTACTAGACCTGAGTTATAACC
ACCTTCGGAGGGTACCCGACGGTCTGCCCTCAGCCCTGGAGCAGCTGTACCTAGAACACAACAATGTCTA
CACCGTCCCTGACAGCTACTTCCGGGGGTCACCCAAGCTGCTGTACGTCCGGTTGTCTCACAACAGTCTC
ACTAACAACGGCCTTGCTACCAACACCTTCAACTCCAGCAGCCTTCTTGAGCTAGACTTGTCTTACAATC
AGCTGCAGAAGATCCCTCCTGTCAACACCAACCTGGAGAATCTTTACCTCCAGGGCAACAGGATCAATGA
GTTCTCCATCAGCAGCTTCTGCACGGTGGTGGACGTCATGAACTTCTCCAAGCTGCAGGTGCTACGCCTG
GATGGGAACGAGATCAAGCGCAGCGCAATGCCGGTGGACGCCCCACTCTGCCTGCGCCTCGCCAACCTCA
TCGAGATCTGA

Translation (376 aa):
MQWASVLLLAGLCSLSQGQYDEDSHWWIQYLRNQQSTYYDPYDPYPYEPSEPYPYGVEEGPAYAYGAPPP
PEPRDCPQECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISAIQEGVFDNATGLLWVALHGNQ
ITSDKVGRKVFSKLRHLERLYLDHNNLTRMPGPLPRSLRELHLDHNQISRVPNNALEGLENLTALYLHHN
EIQEVGSSMRGLRSLILLDLSYNHLRRVPDGLPSALEQLYLEHNNVYTVPDSYFRGSPKLLYVRLSHNSL
TNNGLATNTFNSSSLLELDLSYNQLQKIPPVNTNLENLYLQGNRINEFSISSFCTVVDVMNFSKLQVLRL
DGNEIKRSAMPVDAPLCLRLANLIEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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