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Report for CCDS14926.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14926.1 Public Mus musculus 1 Tpp2 23 108 98 CCDS HistoryNCBI Gene:22019Re-query CCDS DB by CCDS ID:14926.1Re-query CCDS DB by GeneID:22019See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14926.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000087933.9 ENSMUSP00000085244.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000087933.9Link to Ensembl Protein Viewer:ENSMUSP00000085244.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000087933Re-query CCDS DB by Protein ID:ENSMUSP00000085244
Original member Current member NCBI NM_009418.3 NP_033444.1 Accepted alive Link to Nucleotide Sequence:NM_009418.3Link to Protein Sequence:NP_033444.1Re-query CCDS DB by Nucleotide ID:NM_009418Re-query CCDS DB by Protein ID:NP_033444Link to BLAST:NP_033444.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033444.1 1262 Q64514-1 1262 100% 0 0

Chromosomal Locations for CCDS 14926.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 43934089 43934253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43940110 43940238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43949312 43949407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43951107 43951211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43953257 43953381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43954577 43954740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43956471 43956625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43957436 43957512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43960084 43960211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43960868 43960967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43968882 43969030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43970401 43970516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43971564 43971732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43972530 43972687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43973444 43973520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43975416 43975522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43977207 43977361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43978413 43978529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43978735 43978835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43980308 43980404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43981730 43981867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43983072 43983316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43983514 43983592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43985416 43985454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43990511 43990662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43991263 43991359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43992264 43992394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43999628 43999835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44001319 44001438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44002104 44002193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3789 nt):
ATGGCCACCGCCGCGACCGAGGAGCCCTTTCCTTTCCACGGTCTTCTACCAAAGAAGGAGACCGGGGCCT
CCTCCTTCCTGTGCCGCTACCCGGAGTATGACGGGCGCGGGGTGCTCATCGCCGTCCTGGACACAGGGGT
CGATCCCGGGGCCCCGGGCATGCAGGTTACAACTGATGGAAAACCAAAAATCATTGATATCATTGATACA
ACAGGAAGTGGTGATGTAAATACTGCTACAGAAGTAGAACCAAAAGATGGTGAAATTATTGGTCTTTCTG
GAAGAGTGCTTAAGATTCCTGCAAACTGGACAAATCCTTTAGGAAAATATCATATTGGCATTAAAAATGG
TTATGACTTCTATCCAAAGGCTCTCAAGGAAAGGATACAGAAAGAACGGAAGGAAAAAATCTGGGATCCA
ATTCACAGAGTTGCACTTGCAGAAGCTTGTAGAAAACAAGAAGAATTTGATATTGCCAACAATGGCTCTT
CCCAAGCCAATAAACTAATCAAGGAAGAGTTGCAAAGTCAAGTGGAATTACTTAATTCTTTTGAGAAAAA
GTATAGTGATCCAGGCCCTGTATATGACTGCTTGGTGTGGCATGATGGTGAGACCTGGAGAGCCTGTGTT
GATTCAAATGAGAATGGGGACTTGAGTAAATGTGCCGTATTGAGAAACTACAAAGAGGCCCAAGAGTACA
GTTCTTTTGGCACAGCTGAGATGCTGAATTACTCTGTGAACATTTATGACGATGGGAACCTGCTCTCCAT
TGTGACCAGCGGAGGAGCTCATGGAACCCATGTAGCAAGTATAGCCGCAGGGCATTTTCCAGAAGAGCCT
GAACGGAATGGAGTTGCTCCTGGTGCTCAAATTCTATCCATTAAGATTGGTGATACACGGCTAAGCACTA
TGGAAACAGGCACAGGCCTCATCAGAGCTATGATAGAAGTTATAAATCATAAGTGTGATCTTGTCAACTA
CAGTTATGGAGAAGCAACTCATTGGCCAAATTCTGGGAGAATTTGTGAAGTAATTAATGAAGCAGTATGG
AAACATAATACAATTTATGTTTCAAGTGCTGGAAATAATGGTCCATGCCTTTCTACAGTGGGTTGTCCAG
GAGGAACTACATCCAGTGTGATAGGTGTTGGAGCTTATGTTTCCCCTGATATGATGGTTGCAGAGTATTC
ACTGAGAGAGAAACTGCCTGCAAATCAATATACATGGTCTTCTAGAGGCCCAAGTGCTGATGGAGCCCTC
GGTGTGAGCATCAGTGCACCAGGAGGTGCTATTGCTTCTGTGCCTAACTGGACATTGAGGGGGACTCAGC
TAATGAATGGGACATCAATGTCTTCCCCCAATGCCTGTGGTGGCATTGCCCTGGTACTTTCAGGGCTGAA
AGCAAATAATGTTGACTATACTGTACACTCAGTCAGAAGAGCTCTAGAAAATACTGCAATAAAAGCTGAC
AATATAGAAGTATTTGCCCAAGGACATGGAATTATTCAGGTTGACAAAGCTTATGACTACCTCATTCAAA
ATACATCATTTGCTAACAGATTAGGTTTTACAGTTACTGTTGGAAATAACCGTGGTATCTACCTCCGAGA
TCCTGTCCAGGTGGCTGCTCCTTCAGATCATGGTGTTGGCATTGAGCCTGTATTTCCAGAGAACACAGAA
AACTCTGAAAAAATATCCTTTCAGCTTCATTTAGCTTTAACTTCAAATTCATCTTGGGTTCAGTGTCCCA
GCCATTTGGAACTCATGAATCAGTGTCGGCACATAAACATACGTGTGGACCCCAGGGGCTTAAGAGAAGG
GTTACATTATACAGAGGTATGTGGCTATGATATAGCATCCCCCAATGCAGGTCCTTTATTCAGAGTTCCA
ATCACTGCAGTTATAGCAGCAAAAGTAAATGAGTCATCACATTATGATCTAGCCTTTACAGATGTACATT
TTAAACCTGGTCAGATTCGAAGACATTTTGTTGAGGTTCCTGAAGGGGCAACCTGGGCTGAAGTTACCGT
GTGTTCATGTTCTTCTGAGGTATCGGCAAAATTTGTTCTTCATGCAGTACAGCTTGTGAAGCAGAGAGCA
TATCGAAGTCATGAATTTTATAAGTTTTGTTCCCTTCCAGAAAAAGGAACACTTATTGAAGCTTTTCCTG
TTTTGGGCGGAAAAGCAATTGAATTTTGTATTGCTCGTTGGTGGGCAAGTCTTAGTGATGTCAATATTGA
TTATACCATATCATTCCATGGGATAGTGTGTACTGCACCACAGTTAAACATTCATGCATCTGAAGGAATC
AATCGTTTTGATGTTCAGTCCTCTTTAAAGTATGAAGATCTGGCTCCTTGCATAACTTTGAAGAGCTGGG
TGCAAACGCTACGCCCAGTAAATGCAAAAACCAGACCTTTAGGATCAAGAGATGTTTTGCCAAATAATCG
CCAGCTTTATGAGATGGTCCTTACATACAGCTTTCATCAGCCCAAGAGCGGAGAAGTAACACCTAGTTGT
CCACTCCTTTGTGAATTGTTATATGAGTCAGAATTTGACAGTCAGTTGTGGATTATTTTCGACCAGAACA
AAAGACAGATGGGCTCAGGCGATGCCTATCCACATCAGTATTCTCTGAAATTGGAGAAAGGAGATTATAC
AATTCGATTACAGATTCGTCATGAGCAAATCAGTGATTTGGATCGTCTCAAAGATCTTCCGTTTATTGTT
TCACATAGGTTGTCTAATACCTTGAGCTTAGATATTCATGAAAATCATAGCCTTGCACTTCTAGGAAAGA
AGAAATCAAGCAGCTTAACATTACCACCCAAATACAATCAGCCATTCTTTGTTACTTCCTTACCTGATGA
TAAAATACCTAAGGGGGCAGGACCCGGATGCTACCTTGCAGGCTCCTTGACATTGTCAAAGACTGAGCTT
GGAAAGAAAGCTGGGCAGTCTGCAGCAAAACGACAAGGAAAATTTAAAAAGGATGTGATCCCTGTTCATT
ACTATCTCATACCTCCACCAACAAAGATTAAGAATGGCAGCAAAGATAAAGAAAAGGATTCAGAAAAAGA
GAAAGACTTGAAAGAAGAGTTTACTGAAGCATTACGCGATCTCAAAATTCAGTGGATGACCAAGCTTGAT
TCTACTGACATTTACAATGAATTGAAAGAAACATATCCTGCTTACCTTCCTTTGTATGTTGCACGTCTTC
ATCAACTGGATGCTGAAAAGGAACGAATGAAAAGACTTAATGAAATTGTTGATGCTGCCAATGCTGTTAT
TTCTCACATCGATCAAACCGCTCTTGCAGTTTACATTGCAATGAAGACTGACCCCAGGCCTGATGCAGCT
ACTATAAAAAATGATATGGACAAGCAGAAATCCACCCTGATAGATGCCCTCTGCAGGAAAGGATGTGCCC
TGGCAGATCACCTTCTTCATACACAGCCTCACGACGGGGCAGCAGCTGGAGATGCTGAAGCAAAGGAAGA
AGAAGGAGAAAGTACCATGGAATCTCTATCGGAAACCTATTGGGAAACTACAAAGTGGACAGATCTTTTT
GACACTAAGGTTTTGATATTTGCATACAAGCATGCATTAGTAAATAAGATGTATGGGAGAGGCCTTAAGT
TTGCAACCAAACTCGTAGAAGAAAAACCAACAAAAGAAAACTGGAAAAATTGTATTCAACTCATGAAATT
ACTTGGATGGACCCACTGTGCATCTTTTACTGAAAACTGGCTCCCCATCATGTATCCTCCTGATTATTGT
GTATTCTAA

Translation (1262 aa):
MATAATEEPFPFHGLLPKKETGASSFLCRYPEYDGRGVLIAVLDTGVDPGAPGMQVTTDGKPKIIDIIDT
TGSGDVNTATEVEPKDGEIIGLSGRVLKIPANWTNPLGKYHIGIKNGYDFYPKALKERIQKERKEKIWDP
IHRVALAEACRKQEEFDIANNGSSQANKLIKEELQSQVELLNSFEKKYSDPGPVYDCLVWHDGETWRACV
DSNENGDLSKCAVLRNYKEAQEYSSFGTAEMLNYSVNIYDDGNLLSIVTSGGAHGTHVASIAAGHFPEEP
ERNGVAPGAQILSIKIGDTRLSTMETGTGLIRAMIEVINHKCDLVNYSYGEATHWPNSGRICEVINEAVW
KHNTIYVSSAGNNGPCLSTVGCPGGTTSSVIGVGAYVSPDMMVAEYSLREKLPANQYTWSSRGPSADGAL
GVSISAPGGAIASVPNWTLRGTQLMNGTSMSSPNACGGIALVLSGLKANNVDYTVHSVRRALENTAIKAD
NIEVFAQGHGIIQVDKAYDYLIQNTSFANRLGFTVTVGNNRGIYLRDPVQVAAPSDHGVGIEPVFPENTE
NSEKISFQLHLALTSNSSWVQCPSHLELMNQCRHINIRVDPRGLREGLHYTEVCGYDIASPNAGPLFRVP
ITAVIAAKVNESSHYDLAFTDVHFKPGQIRRHFVEVPEGATWAEVTVCSCSSEVSAKFVLHAVQLVKQRA
YRSHEFYKFCSLPEKGTLIEAFPVLGGKAIEFCIARWWASLSDVNIDYTISFHGIVCTAPQLNIHASEGI
NRFDVQSSLKYEDLAPCITLKSWVQTLRPVNAKTRPLGSRDVLPNNRQLYEMVLTYSFHQPKSGEVTPSC
PLLCELLYESEFDSQLWIIFDQNKRQMGSGDAYPHQYSLKLEKGDYTIRLQIRHEQISDLDRLKDLPFIV
SHRLSNTLSLDIHENHSLALLGKKKSSSLTLPPKYNQPFFVTSLPDDKIPKGAGPGCYLAGSLTLSKTEL
GKKAGQSAAKRQGKFKKDVIPVHYYLIPPPTKIKNGSKDKEKDSEKEKDLKEEFTEALRDLKIQWMTKLD
STDIYNELKETYPAYLPLYVARLHQLDAEKERMKRLNEIVDAANAVISHIDQTALAVYIAMKTDPRPDAA
TIKNDMDKQKSTLIDALCRKGCALADHLLHTQPHDGAAAGDAEAKEEEGESTMESLSETYWETTKWTDLF
DTKVLIFAYKHALVNKMYGRGLKFATKLVEEKPTKENWKNCIQLMKLLGWTHCASFTENWLPIMYPPDYC
VF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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