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Report for CCDS14922.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14922.1 Public Mus musculus 1 Fhl2 23 108 98 CCDS HistoryNCBI Gene:14200Re-query CCDS DB by CCDS ID:14922.1Re-query CCDS DB by GeneID:14200See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14922.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000008280.13 ENSMUSP00000008280.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000008280.13Link to Ensembl Protein Viewer:ENSMUSP00000008280.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000008280Re-query CCDS DB by Protein ID:ENSMUSP00000008280
Original member Current member EBI ENSMUST00000185893.1 ENSMUSP00000141170.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000185893.1Link to Ensembl Protein Viewer:ENSMUSP00000141170.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000185893Re-query CCDS DB by Protein ID:ENSMUSP00000141170
Original member NCBI NM_001289533.1 NP_001276462.1 Updated not alive Link to Nucleotide Sequence:NM_001289533.1Link to Protein Sequence:NP_001276462.1Re-query CCDS DB by Nucleotide ID:NM_001289533Re-query CCDS DB by Protein ID:NP_001276462
Current member NCBI NM_001289533.2 NP_001276462.1 Accepted alive Link to Nucleotide Sequence:NM_001289533.2Link to Protein Sequence:NP_001276462.1Re-query CCDS DB by Nucleotide ID:NM_001289533Re-query CCDS DB by Protein ID:NP_001276462Link to BLAST:NP_001276462.1
Original member NCBI NM_010212.4 NP_034342.1 Updated not alive Link to Nucleotide Sequence:NM_010212.4Link to Protein Sequence:NP_034342.1Re-query CCDS DB by Nucleotide ID:NM_010212Re-query CCDS DB by Protein ID:NP_034342
Current member NCBI NM_010212.5 NP_034342.1 Accepted alive Link to Nucleotide Sequence:NM_010212.5Link to Protein Sequence:NP_034342.1Re-query CCDS DB by Nucleotide ID:NM_010212Re-query CCDS DB by Protein ID:NP_034342Link to BLAST:NP_034342.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276462.1 279 O70433 279 100% 0 0
NP_034342.1 279 O70433 279 100% 0 0

Chromosomal Locations for CCDS 14922.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 43123514 43123665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43128244 43128430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43131652 43131821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43141698 43141872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43153076 43153231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGACTGAACGCTTTGACTGCCACCACTGCAATGAATCTCTGTACGGCAAGAAGTACATTCTAAAGGAGG
AGAACCCACACTGTGTGGCCTGCTTTGAGGAACTCTATGCCAATACCTGTGAGGAGTGTGGAACACCCAT
CGGCTGCGACTGCAAGGACTTGTCCTACAAGGATCGGCACTGGCATGAAGGCTGCTTCCATTGCTCCCGG
TGTGGAAGCTCGCTGGTGGACAAGCCCTTTGCTGCCAAGGAGGAACAGCTGCTGTGCACCGACTGCTATT
CCAATGAATACTCGTCCAAGTGCCAGGAATGCAAGAAAACCATCATGCCAGGTACCCGCAAGATGGAATA
CAAGGGCAGCAGCTGGCACGAGACCTGCTTCACCTGTCAGCGCTGCCAGCAGCCCATTGGAACCAAGAGC
TTCATACCTAAGGAGAATCAGAACTTCTGCGTGCCCTGCTATGAGAAGCAGTATGCCCTGCAGTGCGTGC
AGTGCAAAAAGCCTATCACCACAGGAGGTGTTACTTACCGGGAGCAGCCCTGGCACAAGGAATGCTTTGT
GTGCACAGCCTGCAAGAAGCAGCTATCTGGGCAACGCTTCACAGCACGGGATGAGTTTCCATACTGCCTG
ACCTGCTTCTGTGACTTGTACGCTAAGAAATGTGCTGGGTGCACCAACCCCATTAGTGGTCTGGGTGGCA
CAAAGTACATCTCTTTCGAGGAACGCCAATGGCACAACGACTGCTTTAACTGTAAGAAGTGCTCCCTGTC
TCTGGTGGGACGAGGCTTCCTCACAGAGAGAGATGACATCCTCTGTCCTGACTGTGGAAAGGATATTTGA

Translation (279 aa):
MTERFDCHHCNESLYGKKYILKEENPHCVACFEELYANTCEECGTPIGCDCKDLSYKDRHWHEGCFHCSR
CGSSLVDKPFAAKEEQLLCTDCYSNEYSSKCQECKKTIMPGTRKMEYKGSSWHETCFTCQRCQQPIGTKS
FIPKENQNFCVPCYEKQYALQCVQCKKPITTGGVTYREQPWHKECFVCTACKKQLSGQRFTARDEFPYCL
TCFCDLYAKKCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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