NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS14870.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14870.1 Public Mus musculus 1 Prss40 23 108 98 CCDS HistoryNCBI Gene:21756Re-query CCDS DB by CCDS ID:14870.1Re-query CCDS DB by GeneID:21756See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14870.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000047840.8 ENSMUSP00000045118.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000047840.8Link to Ensembl Protein Viewer:ENSMUSP00000045118.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000047840Re-query CCDS DB by Protein ID:ENSMUSP00000045118
Original member Current member NCBI NM_009356.2 NP_033382.2 Accepted alive Link to Nucleotide Sequence:NM_009356.2Link to Protein Sequence:NP_033382.2Re-query CCDS DB by Nucleotide ID:NM_009356Re-query CCDS DB by Protein ID:NP_033382Link to BLAST:NP_033382.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033382.2 365 A6H6T1 365 100% 0 0

Chromosomal Locations for CCDS 14870.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 34552495 34552809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34555969 34556138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34557853 34558127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34559743 34559905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 34560730 34560904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1098 nt):
ATGTGTGGCATCAGGGCCAAAAAATCGGGCCTGGGTGGATACGGGGCCGGCCTGCTGGCTGCTCTGCTCG
GAGTGAGCTTCCTGTCACAGCATGCCCAGACCGCAGAACACGTCACCAACGCTGCGAATAACACTACCAT
CCAGATCATGAAGTCCACTCTATCCCTGTCAGAGGTATGTGGCAAGACCAAATTCCAAGGGAAGATCTAT
GGCGGTCAGATTGCAGGGGCTGAGCGGTGGCCGTGGCAGGCCAGTCTGCGCTTATATGGCAGGCACATCT
GTGGAGCAGTTCTCATCGACAAAAACTGGGTACTCAGCGCTGCCCACTGCTTCCAAAGATCTCAAGAACC
AAGTGACTACCATGTCATGCTAGGCTACACCGACCTGAACAGTCCCACCAGGTACAGCAGGACGATGTCA
GTGCAGAAGGTCATCGTTCACAAAGACTACAACAGATTCCACACCCAAGGAAGTGACATTGTCCTGCTGC
AGCTGCGTTCCTCTGTGGAGTACAGCTCCCACATCCTCCCAGCCTGTGTCCCTGAGGAAAACATAAAAAT
CCCCAAAGAGAAGGCCTGCTGGGCTAGTGGCTGGGGCTATCTCAGAGAGGACGTGCGAATTCCTTTGCCT
AATGAACTGTATGAAGCCGAGCTCATCATCATGAGTAATGACCAGTGTAAAGGATTTTTCCCACCACCAG
TTCCGGGATCCGGTAGAAGCTACTACATATATGATGATATGGTGTGTGCTGCTGACTATGACATGTCAAA
ATCCATCTGCGCAGGAGATTCTGGGGGCCCCCTTGTCTGCTTACTGGAAGGCTCCTGGTACGTGGTAGGG
CTAACCAGCTGGAGCTCTACATGTGAAGAACCAATCGTCAGCCCCAGTGTCTTTGCCAGGGTCTCCTACT
TTGACAAGTGGATTAAAGATAACAAGAAATCATCATCCAACTCAAAGCCAGGGGAGTCCCCTCACCATCC
AGGATCCCCTGAGAATGAAAATCCCGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTG
TGCACAGCCCTGCTGCTCTCCCAGATCCTCCTGCAACAGTTGATTTAG

Translation (365 aa):
MCGIRAKKSGLGGYGAGLLAALLGVSFLSQHAQTAEHVTNAANNTTIQIMKSTLSLSEVCGKTKFQGKIY
GGQIAGAERWPWQASLRLYGRHICGAVLIDKNWVLSAAHCFQRSQEPSDYHVMLGYTDLNSPTRYSRTMS
VQKVIVHKDYNRFHTQGSDIVLLQLRSSVEYSSHILPACVPEENIKIPKEKACWASGWGYLREDVRIPLP
NELYEAELIIMSNDQCKGFFPPPVPGSGRSYYIYDDMVCAADYDMSKSICAGDSGGPLVCLLEGSWYVVG
LTSWSSTCEEPIVSPSVFARVSYFDKWIKDNKKSSSNSKPGESPHHPGSPENENPEGDNKNQGAVIKPTV
CTALLLSQILLQQLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH