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Report for CCDS14511.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14511.1 Public Homo sapiens X TCEAL3 24 110 108 CCDS HistoryNCBI Gene:85012Re-query CCDS DB by CCDS ID:14511.1Re-query CCDS DB by GeneID:85012See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14511.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000243286.7 ENSP00000243286.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000243286.7Link to Ensembl Protein Viewer:ENSP00000243286.3Re-query CCDS DB by Nucleotide ID:ENST00000243286Re-query CCDS DB by Protein ID:ENSP00000243286
Original member Current member EBI ENST00000372627.10 ENSP00000361710.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372627.10Link to Ensembl Protein Viewer:ENSP00000361710.5Re-query CCDS DB by Nucleotide ID:ENST00000372627Re-query CCDS DB by Protein ID:ENSP00000361710
Original member Current member EBI ENST00000372628.5 ENSP00000361711.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372628.5Link to Ensembl Protein Viewer:ENSP00000361711.1Re-query CCDS DB by Nucleotide ID:ENST00000372628Re-query CCDS DB by Protein ID:ENSP00000361711
Original member Current member NCBI NM_001006933.2 NP_001006934.1 Accepted alive Link to Nucleotide Sequence:NM_001006933.2Link to Protein Sequence:NP_001006934.1Re-query CCDS DB by Nucleotide ID:NM_001006933Re-query CCDS DB by Protein ID:NP_001006934Link to BLAST:NP_001006934.1
Original member Current member NCBI NM_032926.3 NP_116315.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032926.3Link to Protein Sequence:NP_116315.1Re-query CCDS DB by Nucleotide ID:NM_032926Re-query CCDS DB by Protein ID:NP_116315Link to BLAST:NP_116315.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006934.1 200 Q969E4 200 100% 0 0
NP_116315.1 200 Q969E4 200 100% 0 0

Chromosomal Locations for CCDS 14511.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103609065 103609667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (603 nt):
ATGGAAAAACCCTACAATAAAAATGAAGGAAACCTGGAAAACGAGGGAAAGCCAGAAGATGAAGTAGAGC
CTGATGATGAAGGAAAGTCAGACGAGGAAGAAAAGCCAGACGTGGAGGGGAAGACAGAATGCGAGGGAAA
GAGAGAGGATGAGGGAGAGCCAGGTGATGAGGGACAACTGGAAGATGAGGGAAGCCAGGAAAAGCAGGGC
AGGTCCGAAGGTGAGGGCAAGCCACAAGGCGAGGGCAAGCCAGCCTCCCAGGCAAAGCCAGAGAGCCAGC
CGCGGGCCGCCGAAAAGCGCCCGGCTGAAGATTATGTGCCCCGGAAAGCAAAAAGAAAAACGGACAGGGG
GACGGACGATTCCCCCAAGGACTCTCAGGAGGACTTACAGGAAAGGCATCTGAGCAGTGAGGAGATGATG
AGAGAATGTGGAGATGTGTCAAGGGCTCAAGAGGAGCTAAGGAAAAAACAGAAAATGGGTGGTTTTCATT
GGATGCAAAGAGATGTACAGGATCCATTCGCCCCAAGGGGACAACGGGGTGTCAGGGGAGTGAGGGGTGG
AGGTAGGGGCCAGAGGGGCTTACACGATATCCCATACCTTTAA

Translation (200 aa):
MEKPYNKNEGNLENEGKPEDEVEPDDEGKSDEEEKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQG
RSEGEGKPQGEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMM
RECGDVSRAQEELRKKQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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