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Report for CCDS14012.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14012.1 Public Homo sapiens 22 RANGAP1 24 110 108 CCDS HistoryNCBI Gene:5905Re-query CCDS DB by CCDS ID:14012.1Re-query CCDS DB by GeneID:5905See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14012.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356244.8 ENSP00000348577.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356244.8Link to Ensembl Protein Viewer:ENSP00000348577.3Re-query CCDS DB by Nucleotide ID:ENST00000356244Re-query CCDS DB by Protein ID:ENSP00000348577
Original member Current member EBI ENST00000405486.5 ENSP00000385866.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405486.5Link to Ensembl Protein Viewer:ENSP00000385866.1Re-query CCDS DB by Nucleotide ID:ENST00000405486Re-query CCDS DB by Protein ID:ENSP00000385866
Original member Current member EBI ENST00000455915.6 ENSP00000401470.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000455915.6Link to Ensembl Protein Viewer:ENSP00000401470.2Re-query CCDS DB by Nucleotide ID:ENST00000455915Re-query CCDS DB by Protein ID:ENSP00000401470
Original member Current member EBI ENST00000705116.1 ENSP00000516069.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000705116.1Link to Ensembl Protein Viewer:ENSP00000516069.1Re-query CCDS DB by Nucleotide ID:ENST00000705116Re-query CCDS DB by Protein ID:ENSP00000516069
Original member Current member NCBI NM_001278651.2 NP_001265580.1 Accepted alive Link to Nucleotide Sequence:NM_001278651.2Link to Protein Sequence:NP_001265580.1Re-query CCDS DB by Nucleotide ID:NM_001278651Re-query CCDS DB by Protein ID:NP_001265580Link to BLAST:NP_001265580.1
Original member Current member NCBI NM_001317930.2 NP_001304859.1 Accepted alive Link to Nucleotide Sequence:NM_001317930.2Link to Protein Sequence:NP_001304859.1Re-query CCDS DB by Nucleotide ID:NM_001317930Re-query CCDS DB by Protein ID:NP_001304859Link to BLAST:NP_001304859.1
Original member Current member NCBI NM_002883.4 NP_002874.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002883.4Link to Protein Sequence:NP_002874.1Re-query CCDS DB by Nucleotide ID:NM_002883Re-query CCDS DB by Protein ID:NP_002874Link to BLAST:NP_002874.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001265580.1 587 P46060 587 100% 0 0
NP_001304859.1 587 P46060 587 100% 0 0
NP_002874.1 587 P46060 587 100% 0 0

Chromosomal Locations for CCDS 14012.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 41246603 41246672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41249330 41249451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41249729 41249817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41251007 41251109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41252872 41252991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41254308 41254494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41256021 41256105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41256191 41256290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41256711 41256824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41257948 41258106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41261446 41261580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41264664 41264843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41268097 41268156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41274600 41274727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 41280933 41281044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1764 nt):
ATGGCCTCGGAAGACATTGCCAAGCTGGCAGAGACACTTGCCAAGACTCAGGTGGCCGGGGGACAGCTGA
GTTTCAAAGGCAAGAGCCTCAAACTCAACACTGCAGAAGATGCTAAAGATGTGATTAAAGAGATTGAAGA
CTTTGACAGCTTGGAGGCTCTGCGTCTGGAAGGCAACACAGTGGGCGTGGAAGCAGCCAGGGTCATCGCC
AAGGCCTTAGAGAAGAAGTCGGAGTTGAAGCGCTGCCACTGGAGTGACATGTTCACGGGAAGGCTGCGGA
CCGAGATCCCACCAGCCCTGATCTCACTAGGGGAAGGACTCATCACAGCTGGGGCTCAGCTGGTGGAGCT
GGACTTAAGCGACAACGCATTCGGGCCCGACGGTGTGCAAGGCTTCGAGGCCCTGCTCAAGAGCTCAGCC
TGCTTCACCCTGCAGGAACTCAAGCTCAACAACTGTGGCATGGGCATTGGCGGCGGCAAGATCCTGGCTG
CAGCTCTGACCGAATGTCACCGGAAATCCAGTGCCCAAGGCAAGCCTCTGGCCCTGAAGGTCTTTGTGGC
TGGCAGAAACCGTCTGGAGAATGATGGCGCCACTGCCTTGGCAGAAGCTTTTAGGGTCATCGGGACCCTG
GAGGAGGTCCACATGCCACAGAATGGGATCAACCACCCTGGCATCACTGCCCTGGCCCAGGCTTTCGCTG
TCAACCCCCTGCTGCGGGTCATCAACCTGAATGACAACACCTTCACTGAGAAGGGCGCCGTGGCCATGGC
CGAGACCTTGAAGACCTTGCGGCAGGTGGAGGTGATTAATTTTGGGGACTGCCTGGTGCGCTCCAAGGGT
GCAGTTGCCATTGCAGATGCCATCCGCGGCGGCCTGCCCAAGCTAAAGGAGCTGAACTTGTCATTCTGTG
AAATCAAGAGGGATGCTGCCCTGGCTGTTGCTGAGGCCATGGCAGACAAAGCTGAGCTGGAGAAGCTGGA
CCTGAATGGCAACACCCTGGGAGAAGAAGGCTGTGAACAGCTTCAGGAGGTGCTGGAGGGCTTCAACATG
GCCAAGGTGCTGGCGTCCCTCAGTGATGACGAGGACGAGGAGGAGGAGGAGGAAGGAGAAGAGGAAGAAG
AGGAAGCAGAAGAAGAGGAGGAGGAAGATGAGGAAGAGGAGGAAGAAGAGGAGGAGGAGGAGGAAGAAGA
GCCTCAGCAGCGAGGGCAGGGAGAGAAGTCAGCCACGCCCTCACGGAAGATTCTGGACCCTAACACTGGG
GAGCCAGCTCCCGTGCTGTCCTCCCCACCTCCTGCAGACGTCTCCACCTTCCTGGCTTTTCCCTCTCCAG
AGAAGCTGCTGCGCCTAGGGCCCAAGAGCTCCGTGCTGATAGCCCAGCAGACTGACACGTCTGACCCCGA
GAAGGTGGTCTCTGCCTTCCTAAAGGTGTCATCTGTGTTCAAGGACGAAGCTACTGTGAGGATGGCAGTG
CAGGATGCAGTAGATGCCCTGATGCAGAAGGCTTTCAACTCCTCGTCCTTCAACTCCAACACCTTCCTCA
CCAGGCTGCTCGTGCACATGGGTCTGCTCAAGAGTGAAGACAAGGTCAAGGCCATTGCCAACCTGTACGG
CCCCCTGATGGCGCTGAACCACATGGTGCAGCAGGACTATTTCCCCAAGGCCCTTGCACCCCTGCTGCTG
GCGTTCGTGACCAAGCCCAACAGCGCCCTGGAATCCTGCTCCTTCGCCCGCCACAGTCTGCTGCAGACGC
TGTACAAGGTCTAG

Translation (587 aa):
MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNTVGVEAARVIA
KALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLSDNAFGPDGVQGFEALLKSSA
CFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPLALKVFVAGRNRLENDGATALAEAFRVIGTL
EEVHMPQNGINHPGITALAQAFAVNPLLRVINLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKG
AVAIADAIRGGLPKLKELNLSFCEIKRDAALAVAEAMADKAELEKLDLNGNTLGEEGCEQLQEVLEGFNM
AKVLASLSDDEDEEEEEEGEEEEEEAEEEEEEDEEEEEEEEEEEEEEPQQRGQGEKSATPSRKILDPNTG
EPAPVLSSPPPADVSTFLAFPSPEKLLRLGPKSSVLIAQQTDTSDPEKVVSAFLKVSSVFKDEATVRMAV
QDAVDALMQKAFNSSSFNSNTFLTRLLVHMGLLKSEDKVKAIANLYGPLMALNHMVQQDYFPKALAPLLL
AFVTKPNSALESCSFARHSLLQTLYKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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